FFCP PHASE1:Hg19::chr8:30585268..30585288,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:30585268..30585288,-
|short_description=p4@GSR
|description=CAGE_peak_4_at_GSR_5end
|association_with_transcript=-45bp_to_ENST00000414019_5end
|EntrezGene...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2936 | |EntrezGene=2936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4623 | |HGNC=4623 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_ENST00000414019_5end | |||
|cluster_id=chr8:30585268..30585288,- | |||
|description=CAGE_peak_4_at_GSR_5end | |||
|id=chr8:30585268..30585288,- | |||
|ontology_enrichment_celltype=CL:0000988!3.21e-12!182;CL:0000037!1.27e-11!172;CL:0000566!1.27e-11!172;CL:0002032!1.84e-10!165;CL:0000837!1.84e-10!165;CL:0000738!2.31e-10!140;CL:0002087!5.32e-09!119;CL:0002031!8.68e-08!124;CL:0002320!1.73e-07!365;CL:0000542!3.36e-07!53;CL:0000051!3.36e-07!53;CL:0000134!5.33e-07!358;CL:0000048!6.55e-07!430;CL:0000838!8.19e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.47e-12,177;CL:0000037,1.12e-11,168;CL:0002032,1.65e-10,161;CL:0000837,1.65e-10,161;CL:0000738,1.92e-10,136;CL:0002087,4.18e-09,115;CL:0002031,7.36e-08,120;CL:0000542,3.36e-07,53;CL:0000051,3.36e-07,53;CL:0002320,3.87e-07,361;CL:0000838,8.19e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002417!8.22e-08!61;UBERON:0000916!8.22e-08!61;UBERON:0002405!1.44e-07!115;UBERON:0005172!2.52e-07!55;UBERON:0005173!2.52e-07!55;UBERON:0002384!4.05e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002417,8.25e-08,60;UBERON:0000916,8.25e-08,60;UBERON:0005172,2.51e-07,54;UBERON:0005173,2.51e-07,54;UBERON:0002384,8.90e-07,371 | |||
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| ||
|short_description=p4@GSR | |||
}} | }} |
Latest revision as of 23:49, 17 September 2015
Short description: | p4@GSR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GSR_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_ENST00000414019_5end |
EntrezGene: | GSR |
HGNC: | 4623 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.47e-12 | 177 |
hematopoietic stem cell | 1.12e-11 | 168 |
hematopoietic oligopotent progenitor cell | 1.65e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.65e-10 | 161 |
leukocyte | 1.92e-10 | 136 |
nongranular leukocyte | 4.18e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 7.36e-08 | 120 |
lymphocyte | 3.36e-07 | 53 |
common lymphoid progenitor | 3.36e-07 | 53 |
connective tissue cell | 3.87e-07 | 361 |
lymphoid lineage restricted progenitor cell | 8.19e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
abdominal segment of trunk | 8.25e-08 | 60 |
abdomen | 8.25e-08 | 60 |
abdomen element | 2.51e-07 | 54 |
abdominal segment element | 2.51e-07 | 54 |
connective tissue | 8.90e-07 | 371 |