FFCP PHASE1:Hg19::chr16:89043605..89043625,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1537 | |||
|TSSclassifier=strong | |||
|UniProt=O75081 | |||
|association_with_transcript=-101bp_to_NM_005187_5end | |||
|cluster_id=chr16:89043605..89043625,- | |||
|coexpression_cluster_id=C3602 | |||
|description=CAGE_peak_6_at_CBFA2T3_5end | |||
|id=chr16:89043605..89043625,- | |||
|ontology_enrichment_celltype=CL:0000763!1.05e-47!112;CL:0000049!1.05e-47!112;CL:0002032!8.44e-45!165;CL:0000837!8.44e-45!165;CL:0000037!1.92e-44!172;CL:0000566!1.92e-44!172;CL:0000988!1.48e-40!182;CL:0000766!6.31e-20!76;CL:0000839!6.68e-20!70;CL:0000738!1.85e-19!140;CL:0002031!4.34e-19!124;CL:0000557!4.77e-17!71;CL:0002087!7.73e-15!119;CL:0002194!2.54e-13!63;CL:0000576!2.54e-13!63;CL:0000040!2.54e-13!63;CL:0000559!2.54e-13!63;CL:0002009!1.20e-12!65;CL:0002393!2.00e-12!9;CL:0002397!2.00e-12!9;CL:0002274!1.41e-09!5;CL:0000457!1.41e-09!5;CL:0002191!1.41e-09!5;CL:0000097!1.41e-09!5;CL:0000831!1.41e-09!5;CL:0002028!1.41e-09!5;CL:0000134!2.38e-09!358;CL:0002320!9.09e-09!365;CL:0000945!5.21e-08!24;CL:0000826!5.21e-08!24;CL:0000219!3.71e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.94e-24;5!CL:0000163;2.80e-13;9!CL:0000763;2.02e-12;100!CL:0000988;1.33e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.78e-38,108;CL:0000049,2.78e-38,108;CL:0002032,5.57e-37,161;CL:0000837,5.57e-37,161;CL:0000037,4.12e-35,168;CL:0000988,6.35e-33,177;CL:0000097,4.05e-24,5;CL:0002028,4.05e-24,5;CL:0000163,2.84e-13,9;CL:0000134,2.22e-12,354;CL:0002320,5.60e-12,361;CL:0000219,1.45e-10,386;CL:0002031,2.16e-10,120;CL:0000048,7.79e-09,427;CL:0000839,8.22e-09,66;CL:0000738,1.17e-08,136;CL:0000557,1.21e-08,67;CL:0000723,1.35e-08,433;CL:0000034,2.75e-08,441;CL:0000766,7.22e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000049;2.29e-10;108 | |||
|ontology_enrichment_disease=DOID:8692!1.79e-39!31;DOID:1240!3.49e-34!39;DOID:2531!9.69e-27!51;DOID:0060083!9.69e-27!51;DOID:1036!1.30e-10!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.70e-69;31!DOID:1240;1.56e-51;39!DOID:2531;1.58e-29;51!DOID:0060083;1.58e-29;51!DOID:1036;1.05e-27;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.74e-72,31;DOID:1240,3.05e-67,39;DOID:2531,5.13e-50,51;DOID:0060083,5.13e-50,51;DOID:1036,6.66e-28,8;DOID:0050686,9.24e-15,137 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.10e-18!112;UBERON:0002390!7.02e-17!102;UBERON:0003061!7.02e-17!102;UBERON:0002371!5.94e-14!80;UBERON:0002405!1.48e-12!115;UBERON:0001474!2.84e-12!86;UBERON:0007023!2.34e-11!115;UBERON:0004765!5.07e-09!101;UBERON:0001434!5.07e-09!101;UBERON:0002384!2.28e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.97e-11,371;UBERON:0002390,3.75e-08,98;UBERON:0003061,3.75e-08,98;UBERON:0002371,2.53e-07,76;UBERON:0002193,4.26e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,1.9704141467987,3.22714203386085,0.786728553697808,0,0.154816123316076,0,0,0,0.232401601740905,0,0,0.553995408531877,0.802177789880567,0.217010870715852,0.447830948479849,0.32389366601898,0.257575567634187,0.290796477559129,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.845021145247767,0.850417199860174,0.628975936525128,0.336985893439485,1.20141514273205,0.964353520182481,1.14005097496499,0.79566670879636,1.27864907635244,0,0.546138611262131,0,0,0,0,0.661044872784862,0.954053754535364,0.569212969109448,0,0.764546456250458,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.649094787309367,1.91542711029194,2.12732736830184,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0,0,0,0,0,2.46331618947972,6.25143881493905,11.4030463547425,9.65603687893642,14.3916374106073,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,2.27858874869665,0.952927101831156,1.64544909234478,0,0,0,0,0,0,0,0,1.42283686696828,0,0.399158742865633,0.957526850661834,0.423347165447766,0,0.280797178113459,0.912938716132769,1.72347885350326,2.50634477090067,0.338583555603207,3.53293765228139,2.42159648629257,1.70338495076131,0,7.98825987201991,7.82866377623456,6.17341824334061,1.36771666781428,5.01131113011436,1.23087398947712,1.89318974933188,2.66457574398256,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,1.10513566212459,0,0,1.6001024709939,0,0,0,4.60415133204185,0.295930216910801,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,1.72678282034527,1.32969345520125,3.60953056987489,5.88187602953219,6.88068506600955,2.65655225813859,6.99320947513666,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25774708558629,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,4.02253351671761,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0.0679697329768317,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0,0.297046400327086,0,0,0.751871343838829,0.902410431630081,0,0,0,0,0,0.917458566809082,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0.426467963801962,0,0.710478008196067,1.30356900021302,0,0,0,0,0,0.942928742204225,0,0,0,0,0,0,0,0.611207220914332,0,0,0.402547587182052,2.24397944612263 | |||
|short_description=p6@CBFA2T3 | |||
}} |
Latest revision as of 10:49, 18 September 2015
Short description: | p6@CBFA2T3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CBFA2T3_5end |
Coexpression cluster: | C3602_Mast_chronic_leukemia_hairy_acute_biphenotypic_CD14CD16 |
Association with transcript: | -101bp_to_NM_005187_5end |
EntrezGene: | CBFA2T3 |
HGNC: | 1537 |
UniProt: | O75081 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.78e-38 | 108 |
common myeloid progenitor | 2.78e-38 | 108 |
hematopoietic oligopotent progenitor cell | 5.57e-37 | 161 |
hematopoietic multipotent progenitor cell | 5.57e-37 | 161 |
hematopoietic stem cell | 4.12e-35 | 168 |
hematopoietic cell | 6.35e-33 | 177 |
mast cell | 4.05e-24 | 5 |
basophil mast progenitor cell | 4.05e-24 | 5 |
endocrine cell | 2.84e-13 | 9 |
mesenchymal cell | 2.22e-12 | 354 |
connective tissue cell | 5.60e-12 | 361 |
motile cell | 1.45e-10 | 386 |
hematopoietic lineage restricted progenitor cell | 2.16e-10 | 120 |
multi fate stem cell | 7.79e-09 | 427 |
myeloid lineage restricted progenitor cell | 8.22e-09 | 66 |
leukocyte | 1.17e-08 | 136 |
granulocyte monocyte progenitor cell | 1.21e-08 | 67 |
somatic stem cell | 1.35e-08 | 433 |
stem cell | 2.75e-08 | 441 |
myeloid leukocyte | 7.22e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.97e-11 | 371 |
hematopoietic system | 3.75e-08 | 98 |
blood island | 3.75e-08 | 98 |
bone marrow | 2.53e-07 | 76 |
hemolymphoid system | 4.26e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.74e-72 | 31 |
leukemia | 3.05e-67 | 39 |
hematologic cancer | 5.13e-50 | 51 |
immune system cancer | 5.13e-50 | 51 |
chronic leukemia | 6.66e-28 | 8 |
organ system cancer | 9.24e-15 | 137 |