FFCP PHASE1:Hg19::chr17:40120071..40120085,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1267 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2158 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_CU674668,CU675383,D28445,DQ892575,DQ895791_5end | |||
|cluster_id=chr17:40120071..40120085,+ | |||
|coexpression_cluster_id=C729 | |||
|description=CAGE_peak_15_at_CNP_5end | |||
|id=chr17:40120071..40120085,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.23e-66;1!UBERON:0006238;2.55e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.34e-20!82;UBERON:0001049!6.60e-20!57;UBERON:0005068!6.60e-20!57;UBERON:0006241!6.60e-20!57;UBERON:0007135!6.60e-20!57;UBERON:0005743!1.38e-18!86;UBERON:0000955!8.53e-18!69;UBERON:0006238!8.53e-18!69;UBERON:0000073!9.30e-18!94;UBERON:0001016!9.30e-18!94;UBERON:0001893!8.12e-17!34;UBERON:0002020!2.86e-16!34;UBERON:0003528!2.86e-16!34;UBERON:0002780!4.52e-16!41;UBERON:0001890!4.52e-16!41;UBERON:0006240!4.52e-16!41;UBERON:0002616!5.67e-16!59;UBERON:0002791!1.25e-15!33;UBERON:0003080!1.62e-15!42;UBERON:0001869!2.20e-14!32;UBERON:0003075!1.18e-11!86;UBERON:0007284!1.18e-11!86;UBERON:0000025!1.31e-11!194;UBERON:0002346!1.03e-10!90;UBERON:0001950!1.70e-10!20;UBERON:0002308!4.70e-10!9;UBERON:0000125!4.70e-10!9;UBERON:0004111!6.11e-10!241;UBERON:0000477!1.37e-09!286;UBERON:0003056!1.53e-09!61;UBERON:0002619!2.90e-09!22;UBERON:0007023!4.50e-09!115;UBERON:0000956!5.75e-09!25;UBERON:0000203!5.75e-09!25;UBERON:0005174!4.84e-08!5;UBERON:0001137!4.84e-08!5;UBERON:0009663!6.74e-08!7;UBERON:0002420!1.01e-07!9;UBERON:0007245!1.01e-07!9;UBERON:0010009!1.01e-07!9;UBERON:0010011!1.01e-07!9;UBERON:0000454!1.01e-07!9;UBERON:0000033!1.28e-07!123;UBERON:0004121!1.95e-07!169;UBERON:0000924!5.24e-07!173;UBERON:0006601!5.24e-07!173;UBERON:0000153!7.72e-07!129;UBERON:0007811!7.72e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;3.34e-66;1!UBERON:0011215;3.34e-66;1!UBERON:0001018;3.34e-66;1!UBERON:0002473;3.34e-66;1!UBERON:0005340;3.34e-66;1!UBERON:0003544;3.34e-66;1!UBERON:0005970;3.34e-66;1!UBERON:0002316;3.34e-66;1!UBERON:0001020;3.34e-66;1!UBERON:0002437;3.34e-66;1!UBERON:0005162;5.96e-34;2!UBERON:0000122;5.96e-34;2!UBERON:0001894;8.16e-11;7!UBERON:0000955;1.64e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,4.66e-66,1;UBERON:0011215,4.66e-66,1;UBERON:0001018,4.66e-66,1;UBERON:0002473,4.66e-66,1;UBERON:0005340,4.66e-66,1;UBERON:0003544,4.66e-66,1;UBERON:0005970,4.66e-66,1;UBERON:0002316,4.66e-66,1;UBERON:0001020,4.66e-66,1;UBERON:0002437,4.66e-66,1;UBERON:0005162,7.05e-34,2;UBERON:0000122,7.05e-34,2;UBERON:0001894,8.16e-11,7;UBERON:0006222,8.16e-11,7;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.10e-07,41;UBERON:0001890,2.10e-07,41;UBERON:0003080,2.10e-07,41;UBERON:0006240,2.10e-07,41 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,1.93866549219044,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,1.88723172345896,0,3.51396668588009,0.182454789215666,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0.316553979779393,0,0,0,0.19980960958213,0.288180834308212,0,0,0,0,0,0,0.209205692624666,0.101998217636322,0,0.600420288709789,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0.366078794705889,0.1251909307065,0,0,0.558867626472451,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0.184105950251841,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0.82046545696302,0.252071696221718,0.829887029570615,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0.540300676947157,0.781078098613847,0,0.443910671357348,0,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,0.920818829879887,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0,0.23248285073625,0,0.801711364730253,0,0,0,0,0,0.170426809518315,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.413731983447581,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@CNP | |||
}} |
Latest revision as of 07:56, 20 September 2015
Short description: | p15@CNP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CNP_5end |
Coexpression cluster: | C729_diencephalon_corpus_thalamus_occipital_brain_medulla_frontal |
Association with transcript: | 0bp_to_CU674668, CU675383, D28445, DQ892575, DQ895791_5end |
EntrezGene: | CNP |
HGNC: | 2158 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 4.66e-66 | 1 |
central nervous system cell part cluster | 4.66e-66 | 1 |
axon tract | 4.66e-66 | 1 |
intercerebral commissure | 4.66e-66 | 1 |
dorsal telencephalic commissure | 4.66e-66 | 1 |
brain white matter | 4.66e-66 | 1 |
brain commissure | 4.66e-66 | 1 |
white matter | 4.66e-66 | 1 |
nervous system commissure | 4.66e-66 | 1 |
cerebral hemisphere white matter | 4.66e-66 | 1 |
multi cell component structure | 7.05e-34 | 2 |
neuron projection bundle | 7.05e-34 | 2 |
diencephalon | 8.16e-11 | 7 |
future diencephalon | 8.16e-11 | 7 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |
regional part of forebrain | 2.10e-07 | 41 |
forebrain | 2.10e-07 | 41 |
anterior neural tube | 2.10e-07 | 41 |
future forebrain | 2.10e-07 | 41 |