FFCP PHASE1:Hg19::chr17:61514812..61514863,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1534 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2571 | |||
|TSSclassifier=strong | |||
|UniProt=P49447 | |||
|association_with_transcript=44bp_to_BT007096_5end | |||
|cluster_id=chr17:61514812..61514863,- | |||
|description=CAGE_peak_3_at_CYB561_5end | |||
|id=chr17:61514812..61514863,- | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-27!180;CL:0000057!1.90e-24!75;CL:0000680!6.99e-17!57;CL:0000056!6.99e-17!57;CL:0000355!6.99e-17!57;CL:0000187!1.13e-15!54;CL:0000183!6.33e-15!59;CL:0000393!1.61e-12!60;CL:0000211!1.61e-12!60;CL:0000192!4.92e-12!42;CL:0000514!4.92e-12!42;CL:0002334!2.90e-10!12;CL:0002494!4.35e-10!16;CL:0000359!3.44e-09!32;CL:0000048!3.99e-09!430;CL:0000723!1.23e-08!436;CL:0000034!6.44e-08!444;CL:0002620!8.44e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.01e-15;12!CL:0000359;4.17e-12;32!CL:0002595;7.33e-09;5!CL:0002620;1.12e-08;23!CL:0000057;1.29e-08;73!CL:0000192;1.37e-08;43!CL:0002570;1.75e-08;8!CL:0000569;1.93e-07;4!CL:0000136;3.40e-07;13!CL:0000134;3.88e-07;55!CL:0002494;6.44e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.08e-26,76;CL:0000048,8.34e-19,427;CL:0000723,3.66e-18,433;CL:0000034,2.46e-17,441;CL:0002334,5.56e-16,12;CL:0000359,1.86e-12,32;CL:0000680,1.23e-10,58;CL:0000056,1.23e-10,58;CL:0000355,1.23e-10,58;CL:0000134,3.14e-10,354;CL:0000192,3.39e-10,43;CL:0000514,3.39e-10,43;CL:0002320,4.00e-10,361;CL:0000136,6.72e-10,15;CL:0000187,1.33e-09,55;CL:0002595,6.30e-09,5;CL:0002620,1.15e-08,23;CL:0002570,1.67e-08,8;CL:0000393,4.49e-08,61;CL:0000211,4.49e-08,61;CL:0000219,4.57e-08,386;CL:0000569,2.58e-07,4;CL:0000011,2.58e-07,4;CL:0002494,8.01e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.37e-08;43!CL:0000011;1.93e-07;4!CL:0000355;8.33e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.00e-08;5!DOID:450;6.00e-08;5!DOID:66;6.00e-08;5!DOID:423;6.00e-08;5!DOID:0080000;6.00e-08;5!DOID:11722;6.00e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.89e-08,5;DOID:450,6.89e-08,5;DOID:66,6.89e-08,5;DOID:423,6.89e-08,5;DOID:0080000,6.89e-08,5;DOID:11722,6.89e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.65e-18!83;UBERON:0002329!9.65e-18!83;UBERON:0003077!9.65e-18!83;UBERON:0003059!9.65e-18!83;UBERON:0007282!9.65e-18!83;UBERON:0009618!9.65e-18!83;UBERON:0007285!9.65e-18!83;UBERON:0002385!1.41e-17!63;UBERON:0001015!1.41e-17!63;UBERON:0000383!1.41e-17!63;UBERON:0004290!3.16e-17!70;UBERON:0001134!5.20e-17!61;UBERON:0002036!5.20e-17!61;UBERON:0003082!5.20e-17!61;UBERON:0000486!1.71e-13!82;UBERON:0007100!3.95e-12!27;UBERON:0000948!3.24e-11!24;UBERON:0005498!3.24e-11!24;UBERON:0004140!3.24e-11!24;UBERON:0009881!3.24e-11!24;UBERON:0004141!3.24e-11!24;UBERON:0003084!3.24e-11!24;UBERON:0007005!3.24e-11!24;UBERON:0004139!3.24e-11!24;UBERON:0004291!3.24e-11!24;UBERON:0004872!3.54e-11!84;UBERON:0000475!5.29e-11!365;UBERON:0001013!8.07e-10!14;UBERON:0004573!1.87e-08!33;UBERON:0004571!1.87e-08!33;UBERON:0001009!2.93e-08!113;UBERON:0003102!6.24e-08!95;UBERON:0001637!1.00e-07!42;UBERON:0003509!1.00e-07!42;UBERON:0004572!1.00e-07!42;UBERON:0005256!1.21e-07!143;UBERON:0004535!1.40e-07!110;UBERON:0000055!5.03e-07!69;UBERON:0002199!6.52e-07!45;UBERON:0002416!6.52e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.06e-13;33!UBERON:0004571;5.06e-13;33!UBERON:0001013;2.67e-12;14!UBERON:0003688;1.11e-09;6!UBERON:0002358;1.11e-09;6!UBERON:0003684;1.11e-09;6!UBERON:0001178;1.11e-09;6!UBERON:0003834;7.33e-09;5!UBERON:0001533;7.33e-09;5!UBERON:0001637;1.41e-08;42!UBERON:0003509;1.41e-08;42!UBERON:0004572;1.41e-08;42!UBERON:0004457;3.11e-08;9!UBERON:0000042;3.11e-08;9!UBERON:0002384;5.85e-07;198!UBERON:0000948;9.34e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.66e-15,33;UBERON:0004571,2.66e-15,33;UBERON:0002329,3.06e-13,71;UBERON:0003059,3.06e-13,71;UBERON:0007282,3.06e-13,71;UBERON:0004290,3.06e-13,71;UBERON:0009618,3.06e-13,71;UBERON:0003077,6.15e-13,72;UBERON:0007285,6.15e-13,72;UBERON:0007524,1.21e-12,73;UBERON:0001013,2.53e-12,14;UBERON:0001637,3.11e-12,42;UBERON:0003509,3.11e-12,42;UBERON:0004572,3.11e-12,42;UBERON:0001134,1.04e-11,62;UBERON:0002036,1.04e-11,62;UBERON:0003082,1.04e-11,62;UBERON:0007503,2.72e-11,78;UBERON:0002385,4.09e-11,64;UBERON:0001015,4.09e-11,64;UBERON:0000383,4.09e-11,64;UBERON:0000486,4.86e-11,83;UBERON:0002384,1.78e-10,371;UBERON:0004872,8.89e-10,83;UBERON:0003688,1.25e-09,6;UBERON:0002358,1.25e-09,6;UBERON:0003684,1.25e-09,6;UBERON:0001178,1.25e-09,6;UBERON:0003834,6.30e-09,5;UBERON:0001533,6.30e-09,5;UBERON:0002199,4.99e-08,46;UBERON:0002416,4.99e-08,46;UBERON:0007500,6.67e-08,59;UBERON:0001981,6.67e-08,59;UBERON:0004537,6.67e-08,59;UBERON:0006965,6.67e-08,59;UBERON:0000055,8.88e-08,68;UBERON:0000948,2.87e-07,24;UBERON:0005498,2.87e-07,24;UBERON:0004140,2.87e-07,24;UBERON:0009881,2.87e-07,24;UBERON:0004141,2.87e-07,24;UBERON:0003084,2.87e-07,24;UBERON:0007005,2.87e-07,24;UBERON:0004139,2.87e-07,24;UBERON:0004291,2.87e-07,24 | |||
|phase1_expression=1.99846217197612,2.14100523890983,2.81908808191942,1.0007329835313,4.02264984984559,7.85104671690332,5.06599756336621,8.84407822797563,0.783556884599516,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.767175371061182,1.0843174571537,0.50133791063589,0.579386075843295,0,2.43317435151318,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,5.4666914686485,0,3.83986624358335,9.75244510545967,2.83734705758686,0.560677600142307,2.1349799145941,0.24666754841716,0.933633106199299,0.538842688278752,0.490385709340376,0.756787138224657,0,0,1.24864030732128,0,1.19558944441441,0,0.161872944368132,0,2.24569588380383,0.245668634623536,1.34323515528495,1.18800285728205,2.22540236350701,5.46096817162816,2.87447256726495,0.336672227908132,0.125118519871964,2.21651292387346,1.75591048352335,3.0648779579902,2.85452311922534,0.453728732640084,3.40840307808838,1.2813443329114,2.11931901159562,4.80145753735044,1.33968288009971,3.86460810068444,0.930584281657949,0.506328996723799,0.194874010322397,2.27190396819703,2.39329736469978,0.161646056818812,3.90510551768276,1.5112814734146,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,3.12899064659632,5.14592750554308,0,0,0.721879481669586,0,0,0,0.220587945464788,0,0,0,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,2.07986957055916,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0,1.93907573636667,7.15312891703765,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,3.25572963234866,4.11620168390384,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,1.59259437334337,0.205476322550383,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0.713715955188647,0,0.234282829985426,0,0,0,0,0,0,0.783204629850962,1.37257369524342,0,0,0,0,1.66435439510497,0.30239029332968,3.96972492510043,0.767309866440312,5.61320188866147,2.94720043288112,2.55853624533352,7.07757253031873,7.42090332224955,2.7757744884478,7.45759246315134,2.87445046048332,3.63478100428535,2.44041794765914,0,0,0,0.459257792658427,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,1.07834031980251,1.38153307253517,0.964856007391714,0.214840489736547,0.580066775656914,0.170453254832202,0.534192213880424,0,0,0,0,2.32422774648643,8.49993336442728,7.6674099717666,1.23213432070436,3.19383618190213,3.47973196830029,0.18532421910392,1.14499909393593,0.372158369359667,0,0.762520775695299,0.767693373934002,0,2.22742273548156,7.06453776179307,0.179872457583315,1.09814811894422,0.706874414074119,3.23491970517306,1.58510321173008,1.26377536871694,0.48763373908959,1.21856744815642,13.7345190783782,0.682499557039929,3.25232493493539,5.65040583101214,28.6709978643985,1.99031692572366,6.13831239355268,0.578775534266688,0,0,0.30982349809975,0.845086807596724,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,2.96365403663912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0,0,3.89768643453339,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.278304294485554,1.99613798001194,0.260427761085233,0.174919999992391,2.17499872630438,0.1137934482855,0.254253650292766,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0.0897576444097721,0,0.31900115973192,0.549585560411174,0,0,0,0,1.35357396370308,2.94093801476609,4.02771808742022,0.189753732724185,0,0,0.163232808159148,0,0,1.99052386215701,0.0884575645033392,0,0,0,0,0,4.01288823649394,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.0633107959558787,0.195551382734803,0,1.06726497369676,0,0.288180834308212,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0,0,1.28929632425987,0,1.39641200636127,0.458320848023367,0,0.399358000997982,0.858452096273142,0.223171457441873,0,2.52209918479682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,29.8179038124488,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.751145584238999,0,0,0.124192805882767,0,0,0.151649117541648,0,0,0,0.144921028610825,12.5374034424974,3.73941295755559,8.3220879225392,0.568209015825267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| |||
|short_description=p3@CYB561 | |||
}} |
Latest revision as of 17:13, 16 September 2015
Short description: | p3@CYB561 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYB561_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_BT007096_5end |
EntrezGene: | CYB561 |
HGNC: | 2571 |
UniProt: | P49447 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.08e-26 | 76 |
multi fate stem cell | 8.34e-19 | 427 |
somatic stem cell | 3.66e-18 | 433 |
stem cell | 2.46e-17 | 441 |
preadipocyte | 5.56e-16 | 12 |
vascular associated smooth muscle cell | 1.86e-12 | 32 |
muscle precursor cell | 1.23e-10 | 58 |
myoblast | 1.23e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-10 | 58 |
mesenchymal cell | 3.14e-10 | 354 |
smooth muscle cell | 3.39e-10 | 43 |
smooth muscle myoblast | 3.39e-10 | 43 |
connective tissue cell | 4.00e-10 | 361 |
fat cell | 6.72e-10 | 15 |
muscle cell | 1.33e-09 | 55 |
smooth muscle cell of the subclavian artery | 6.30e-09 | 5 |
skin fibroblast | 1.15e-08 | 23 |
mesenchymal stem cell of adipose | 1.67e-08 | 8 |
electrically responsive cell | 4.49e-08 | 61 |
electrically active cell | 4.49e-08 | 61 |
motile cell | 4.57e-08 | 386 |
cardiac mesenchymal cell | 2.58e-07 | 4 |
migratory trunk neural crest cell | 2.58e-07 | 4 |
cardiocyte | 8.01e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.89e-08 | 5 |
myotonic disease | 6.89e-08 | 5 |
muscle tissue disease | 6.89e-08 | 5 |
myopathy | 6.89e-08 | 5 |
muscular disease | 6.89e-08 | 5 |
myotonic dystrophy | 6.89e-08 | 5 |