FFCP PHASE1:Hg19::chr17:62502942..62502965,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1655 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2746 | |||
|TSSclassifier=strong | |||
|UniProt=P17844 | |||
|association_with_transcript=-458bp_to_ENST00000540698,NM_004396,uc002jej.2,uc002jek.2,uc010wqa.1_5end | |||
|cluster_id=chr17:62502942..62502965,- | |||
|coexpression_cluster_id=C2428 | |||
|description=CAGE_peak_6_at_DDX5_5end | |||
|id=chr17:62502942..62502965,- | |||
|ontology_enrichment_celltype=CL:0000766!3.19e-25!76;CL:0000557!3.08e-22!71;CL:0000763!3.60e-22!112;CL:0000049!3.60e-22!112;CL:0000738!4.11e-22!140;CL:0002057!4.48e-22!42;CL:0000037!4.47e-21!172;CL:0000566!4.47e-21!172;CL:0002032!1.35e-19!165;CL:0000837!1.35e-19!165;CL:0000839!2.77e-19!70;CL:0002009!5.95e-19!65;CL:0000860!6.47e-19!45;CL:0002194!7.42e-18!63;CL:0000576!7.42e-18!63;CL:0000040!7.42e-18!63;CL:0000559!7.42e-18!63;CL:0000988!8.75e-18!182;CL:0002031!1.10e-16!124;CL:0002087!6.64e-15!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.32e-19;33!CL:0002057;9.32e-19;33!CL:0000473;4.45e-15;39!CL:0000234;4.45e-15;39!CL:0000766;7.39e-13;69!CL:0000576;1.15e-12;48!CL:0000763;7.07e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.13e-29,72;CL:0000557,1.32e-25,67;CL:0000763,1.62e-24,108;CL:0000049,1.62e-24,108;CL:0000738,1.08e-23,136;CL:0000860,7.83e-23,42;CL:0002057,7.83e-23,42;CL:0000037,3.03e-22,168;CL:0000473,3.47e-22,48;CL:0000234,3.47e-22,48;CL:0002009,4.62e-22,61;CL:0000839,4.77e-22,66;CL:0002194,7.13e-21,59;CL:0000576,7.13e-21,59;CL:0000040,7.13e-21,59;CL:0000559,7.13e-21,59;CL:0002032,1.06e-20,161;CL:0000837,1.06e-20,161;CL:0000988,7.33e-20,177;CL:0002031,8.11e-18,120;CL:0002087,4.51e-16,115;CL:0000134,1.68e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-16;42!CL:0000049;2.49e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.18e-18!86;UBERON:0002371!1.31e-18!80;UBERON:0004765!2.39e-14!101;UBERON:0001434!2.39e-14!101;UBERON:0002390!1.25e-13!102;UBERON:0003061!1.25e-13!102;UBERON:0002193!1.09e-12!112;UBERON:0002405!8.05e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.87e-22,76;UBERON:0001474,8.60e-22,82;UBERON:0004765,5.84e-17,90;UBERON:0002405,6.53e-17,93;UBERON:0002390,7.35e-16,98;UBERON:0003061,7.35e-16,98;UBERON:0001434,4.09e-15,100;UBERON:0002193,1.78e-14,108 | |||
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| |||
|short_description=p6@DDX5 | |||
}} |
Latest revision as of 19:48, 16 September 2015
Short description: | p6@DDX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DDX5_5end |
Coexpression cluster: | C2428_Mast_CD14_Eosinophils_immature_CD19_CD4_CD8 |
Association with transcript: | -458bp_to_ENST00000540698, NM_004396, uc002jej.2, uc002jek.2, uc010wqa.1_5end |
EntrezGene: | DDX5 |
HGNC: | 2746 |
UniProt: | P17844 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.13e-29 | 72 |
granulocyte monocyte progenitor cell | 1.32e-25 | 67 |
myeloid cell | 1.62e-24 | 108 |
common myeloid progenitor | 1.62e-24 | 108 |
leukocyte | 1.08e-23 | 136 |
classical monocyte | 7.83e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.83e-23 | 42 |
hematopoietic stem cell | 3.03e-22 | 168 |
defensive cell | 3.47e-22 | 48 |
phagocyte | 3.47e-22 | 48 |
macrophage dendritic cell progenitor | 4.62e-22 | 61 |
myeloid lineage restricted progenitor cell | 4.77e-22 | 66 |
monopoietic cell | 7.13e-21 | 59 |
monocyte | 7.13e-21 | 59 |
monoblast | 7.13e-21 | 59 |
promonocyte | 7.13e-21 | 59 |
hematopoietic oligopotent progenitor cell | 1.06e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-20 | 161 |
hematopoietic cell | 7.33e-20 | 177 |
hematopoietic lineage restricted progenitor cell | 8.11e-18 | 120 |
nongranular leukocyte | 4.51e-16 | 115 |
mesenchymal cell | 1.68e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.87e-22 | 76 |
bone element | 8.60e-22 | 82 |
skeletal element | 5.84e-17 | 90 |
immune system | 6.53e-17 | 93 |
hematopoietic system | 7.35e-16 | 98 |
blood island | 7.35e-16 | 98 |
skeletal system | 4.09e-15 | 100 |
hemolymphoid system | 1.78e-14 | 108 |