FFCP PHASE1:Hg19::chr17:80275399..80275416,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=924 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1695 | |||
|TSSclassifier=strong | |||
|UniProt=P09564,Q29VG3 | |||
|association_with_transcript=63bp_to_ENST00000312648,NM_006137,uc002kel.1,uc002kem.2,uc010din.2,uc010wvk.1_5end | |||
|cluster_id=chr17:80275399..80275416,- | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_3_at_CD7_5end | |||
|id=chr17:80275399..80275416,- | |||
|ontology_enrichment_celltype=CL:0000738!1.36e-22!140;CL:0000037!5.75e-20!172;CL:0000566!5.75e-20!172;CL:0000988!3.04e-18!182;CL:0000084!3.48e-18!25;CL:0000827!3.48e-18!25;CL:0000791!6.47e-18!18;CL:0000789!6.47e-18!18;CL:0002420!6.47e-18!18;CL:0002419!6.47e-18!18;CL:0000790!6.47e-18!18;CL:0002087!9.47e-18!119;CL:0002032!5.31e-17!165;CL:0000837!5.31e-17!165;CL:0002031!1.50e-14!124;CL:0000625!4.16e-12!11;CL:0002057!7.05e-12!42;CL:0000860!2.23e-10!45;CL:0000766!8.30e-10!76;CL:0000542!1.60e-09!53;CL:0000051!1.60e-09!53;CL:0000838!2.62e-09!52;CL:0000763!1.91e-08!112;CL:0000049!1.91e-08!112;CL:0002194!2.32e-07!63;CL:0000576!2.32e-07!63;CL:0000040!2.32e-07!63;CL:0000559!2.32e-07!63;CL:0002009!2.66e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.37e-27;18!CL:0000789;1.37e-27;18!CL:0002419;1.37e-27;18!CL:0000084;2.85e-25;25!CL:0000625;2.42e-18;11!CL:0000624;1.09e-09;6!CL:0000094;4.23e-08;8!CL:0002087;6.11e-08;104!CL:0000542;9.86e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.34e-27,18;CL:0000789,1.34e-27,18;CL:0002420,1.34e-27,18;CL:0002419,1.34e-27,18;CL:0000790,1.34e-27,18;CL:0000084,2.75e-25,25;CL:0000827,2.75e-25,25;CL:0000738,7.54e-24,136;CL:0000037,3.74e-22,168;CL:0000988,5.19e-20,177;CL:0002087,1.52e-19,115;CL:0000625,2.46e-18,11;CL:0002032,5.95e-18,161;CL:0000837,5.95e-18,161;CL:0002031,5.67e-15,120;CL:0000838,1.90e-14,52;CL:0000542,5.12e-14,53;CL:0000051,5.12e-14,53;CL:0000624,1.09e-09,6;CL:0000094,3.35e-08,8;CL:0000766,7.53e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000790;1.37e-27;18!CL:0000051;9.86e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.62e-19!115;UBERON:0002390!5.37e-12!102;UBERON:0003061!5.37e-12!102;UBERON:0002193!2.59e-11!112;UBERON:0000178!1.08e-08!15;UBERON:0000179!1.08e-08!15;UBERON:0000463!1.08e-08!15;UBERON:0002405!4.88e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.90e-14;15!UBERON:0000179;6.90e-14;15!UBERON:0000463;6.90e-14;15!UBERON:0002390;1.57e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.93e-14,15;UBERON:0000179,6.93e-14,15;UBERON:0000463,6.93e-14,15;UBERON:0002390,2.36e-12,98;UBERON:0003061,2.36e-12,98;UBERON:0002193,7.68e-12,108;UBERON:0004177,5.67e-08,7;UBERON:0005057,5.67e-08,7;UBERON:0002370,4.82e-07,4;UBERON:0005058,4.82e-07,4;UBERON:0009113,4.82e-07,4;UBERON:0003295,4.82e-07,4;UBERON:0005562,4.82e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,32.649234978459,18.039981710569,27.5572699502615,0,0,0,0,0,0,10.5259127621057,11.2304890583279,19.096956622995,1.56740831967947,6.15397965436061,1.03030227053675,0.290796477559129,2.64513160582167,0.485168122375632,1.16214518452842,2.05583944010913,0.929119112685311,1.7261543539329,1.7931249457037,0.236482229888585,2.06847408441971,1.93645405075148,0,0.752969358170419,3.27487380069415,0.449446968890169,1.53041946185451,2.24650318953266,1.27867425159808,0.989553900560148,0.797854630486527,0.852449501065388,2.61188314765726,3.40431134814684,0.622822248995575,1.00499466102697,2.08593167368081,0.217188844705117,0.605399502633369,1.10483290796269,0.632924774881769,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,2.34894875748376,1.14681968437569,0,12.3311883855938,0.526768169550154,23.60517241366,22.7946242394516,25.9057888739382,15.3811575759424,28.681159463756,16.5706732007157,38.9653456815823,7.91014243884732,17.6763544484902,5.09527957542329,10.8321545506006,6.14838334683241,7.93362020115257,24.6656856905514,20.7262513339386,22.6046406873341,39.4442258011081,22.7409703876256,38.6781438078414,20.1690630001668,17.2449222120865,9.62156847351364,9.61474829674111,37.9092843045675,39.7160906852415,43.7207940446252,35.2345778641988,42.4915549032669,27.4847598415161,34.3327015463824,45.9831678275786,56.2482813597003,53.755479352485,67.1985234016187,0,0,0,0,0,0,0,0,0,0,0.790513071238134,1.0478326039817,0,0,0,0,0,8.10868122638163,8.57992366170192,9.28643753323912,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723280468230358,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,0.590789906681404,17.658523976586,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,48.8359444852299,0.823240336780769,0,0,1.58390374586686,0.301439377059586,0.871533458600294,1.19967589418468,0,0,0,0,0,0,0,0,0,11.9931104073074,84.3291653664248,54.5537764394579,88.8133811055859,0,0,0,0,0,0,2.99161459204025,1.65766205374414,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.686286847621712,23.778323004132,29.1214171105133,35.7537318641538,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0.511359764496605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06031162111118,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,1.54911749049875,0,0,0.88424136911809,0,0,0.633322905892992,0,0.379473173765715,1.39973888097993,0,0,0,1.12972560932135,0,1.68471475667626,0,0,29.4319613354658,27.5269394571255,34.1788312304498,17.6291513838764,18.0999400157925,19.4541993357815,22.6813203640008,29.345631522888,0.213648142254946,0,0,0.185803175125719,0,4.90878719104057,25.986482454798,19.9579371432817,20.874085344428,0,0,7.30072663094993,0,0,0,9.31104777908818,0,0,0,0,0,0,0,0,0,11.0778659052941,0,0.33307196799782,7.04935025439248,0,0.586032717087576,0,0.222886768554957,0,0,1.48482340416319,0,0,0.140669416410513,0,0,0,1.9924798825107,11.0513566212459,0,0,0,0,0,0,0,0.887790650732402,33.5276329285716,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0,1.52581736317083,0.110579259931225,0,0,0,0,0.461701551022782,0,0,0,0,1.91400695839152,0,3.73124343213044,41.899252260252,3.45356564069054,0.166211681900156,0,0,0,0,0.794682894901893,0,0,0,0,0.995261931078505,5.30745387020035,5.49927130440263,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0,12.0990716048664,0,1.83241080922615,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,2.13375836274523,0,0.225980740780532,0,0,0,0,0,1.92107695265417,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0.446342914883745,0.201550417460179,0,2.32991899054908,8.42980050687293,7.82950654621081,7.54919691166871,0,0.338693328263138,0,0,0,0.137539436597234,0,0.2249738915515,0,0.242998226632099,0,0.315222829196793,0.472091293214983,0,0,0,0,0.662091970365432,0,1.08599920350743,0,0.979762080328227,0,0,0,0,1.46552233678082,0,0.258565912723101,0.13223260174269,0,0,3.9511342650047,1.57204305099666,4.14239055347196,21.8313049597258,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751288044986092,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.664324201566815,0,0,0,0,0.59996218756479,0,0,0,0.184105950251841,0,1.86623178009892,0,0,0,0,0,0,0,0.558644917973244,0,0.0788617450012534,0,0,0,0.06422922509645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| |||
|short_description=p3@CD7 | |||
}} |
Latest revision as of 12:18, 18 September 2015
Short description: | p3@CD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD7_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 63bp_to_ENST00000312648, NM_006137, uc002kel.1, uc002kem.2, uc010din.2, uc010wvk.1_5end |
EntrezGene: | CD7 |
HGNC: | 1695 |
UniProt: | P09564Q29VG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.34e-27 | 18 |
alpha-beta T cell | 1.34e-27 | 18 |
immature T cell | 1.34e-27 | 18 |
mature T cell | 1.34e-27 | 18 |
immature alpha-beta T cell | 1.34e-27 | 18 |
T cell | 2.75e-25 | 25 |
pro-T cell | 2.75e-25 | 25 |
leukocyte | 7.54e-24 | 136 |
hematopoietic stem cell | 3.74e-22 | 168 |
hematopoietic cell | 5.19e-20 | 177 |
nongranular leukocyte | 1.52e-19 | 115 |
CD8-positive, alpha-beta T cell | 2.46e-18 | 11 |
hematopoietic oligopotent progenitor cell | 5.95e-18 | 161 |
hematopoietic multipotent progenitor cell | 5.95e-18 | 161 |
hematopoietic lineage restricted progenitor cell | 5.67e-15 | 120 |
lymphoid lineage restricted progenitor cell | 1.90e-14 | 52 |
lymphocyte | 5.12e-14 | 53 |
common lymphoid progenitor | 5.12e-14 | 53 |
CD4-positive, alpha-beta T cell | 1.09e-09 | 6 |
granulocyte | 3.35e-08 | 8 |
myeloid leukocyte | 7.53e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 6.93e-14 | 15 |
haemolymphatic fluid | 6.93e-14 | 15 |
organism substance | 6.93e-14 | 15 |
hematopoietic system | 2.36e-12 | 98 |
blood island | 2.36e-12 | 98 |
hemolymphoid system | 7.68e-12 | 108 |
hemopoietic organ | 5.67e-08 | 7 |
immune organ | 5.67e-08 | 7 |
thymus | 4.82e-07 | 4 |
hemolymphoid system gland | 4.82e-07 | 4 |
thymic region | 4.82e-07 | 4 |
pharyngeal gland | 4.82e-07 | 4 |
thymus primordium | 4.82e-07 | 4 |