FFCP PHASE1:Hg19::chr18:2571572..2571606,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10403 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16909 | |||
|TSSclassifier=strong | |||
|UniProt=F5H1J6 | |||
|association_with_transcript=0bp_to_ENST00000543946_5end | |||
|cluster_id=chr18:2571572..2571606,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_2_at_NDC80_5end | |||
|id=chr18:2571572..2571606,+ | |||
|ontology_enrichment_celltype=CL:0000548!7.11e-15!679;CL:0000004!7.11e-15!679;CL:0000255!7.11e-15!679;CL:0000012!2.26e-14!682;CL:0000066!1.59e-12!254;CL:0000003!4.22e-10!722;CL:0000055!4.12e-09!180;CL:0002319!4.09e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.50e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.33e-12,253;CL:0002319,2.86e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.07e-47!235;DOID:14566!9.38e-46!239;DOID:0050687!4.63e-27!143;DOID:305!2.09e-22!106;DOID:0050686!3.34e-20!137;DOID:2531!4.47e-12!51;DOID:0060083!4.47e-12!51;DOID:1240!1.57e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:305;7.01e-08;106!DOID:0050687;1.40e-07;143!DOID:2531;1.47e-07;51!DOID:0060083;1.47e-07;51!DOID:1240;3.27e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.26e-46,235;DOID:14566,2.54e-45,239;DOID:0050687,1.58e-26,143;DOID:305,3.00e-22,106;DOID:0050686,2.15e-19,137;DOID:2531,2.27e-12,51;DOID:0060083,2.27e-12,51;DOID:1240,1.00e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,1.92690471501885,0.563817616383885,2.00146596706261,0,0,0,0,0,2.7030733015166,0,3.49506195408276,0.791300934685361,1.8564952944007,0.994192127183747,0.672325146451775,1.80808358407193,0,0.975865597581014,6.89477925230012,2.24400760368678,1.25381888591235,29.4823066744988,20.6680381860055,18.3292253808412,18.1863905680124,20.6893485413863,22.4325726743986,0.393364276848904,0,0.464448369948228,4.59710612239464,1.204823675113,0.369754010166788,23.627496176992,11.3735385989937,2.64240395401362,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0.285012743741249,0,0.182664153764634,3.51992488922645,0.546138611262131,1.77901850772711,1.70692089026603,0.800791974072025,1.14950487990897,2.64417949113945,3.81621501814146,2.84606484554724,0,1.14681968437569,0,0,5.26768169550154,0.590129310341499,0.393010762749165,1.64481199199607,2.50779743086017,1.95553359980154,0.946895611469467,0,7.5759110681918,5.00830042707223,3.76607620792156,6.49929273036037,5.12365278902701,6.63302672555379,9.70183637161689,8.84320056914715,11.012517257932,0.741432815810302,0.535081656179426,0,13.5971211237079,0.383220493601921,1.71813722741315,3.03623630423403,0.95569624297229,0.651083453856419,0,0.301150238155546,0.383959833463255,0,0.947109008176067,0,0.604820229674197,0.267440195783507,0.289648807765598,0,7.37770945674,7.1603034632377,29.999449647919,1.50401373190767,2.89693037921647,6.36228757640879,0.486634870302636,18.8124286156495,10.1995522832779,6.67544371267758,0.523916301990851,0.728590576585084,2.22470665670658,0,0.174129737299267,0,0,0,0,5.56534740626774,6.881876760849,3.12426451446835,3.95715559346807,3.77549492588915,7.97842321626196,6.89683389571475,1.29208379584664,1.77883131343355,3.01248551488203,5.63961043952806,0.760272105718513,1.70843440283719,9.92690316933846,0.81014194788176,17.5920464719637,11.900056749187,12.1620398921988,7.66583187329416,5.69559395740877,4.39684185432977,1.31780417436063,0,0.436094052142534,0.993943903390637,11.9032680964705,0.132409180813219,23.2337662806539,21.2801029319014,3.92474320099615,1.06748995729705,1.48000529050296,6.53543174339509,6.46611225934503,16.019266505119,2.27036141467397,0,8.20125011418288,2.80944069147288,5.13424639390004,1.94283284717341,21.2556442545214,18.2916427135989,18.3990556779946,5.51216262388212,18.3023132794534,2.6864703105699,4.75201142912821,2.71993622206413,1.82032272387605,0,30.63717273964,21.6455039378498,19.3944880838928,10.5354629011401,4.90380473278431,3.15499923703853,17.5819883898033,33.3664722381283,0.427114777637135,2.96704661623387,24.0072876867522,6.49230934202165,6.1833729610951,2.79175284497385,26.8354368263613,10.815507572893,20.6995694880174,2.85354685791128,1.61646056818812,15.620422070731,16.9263525022436,8.98671139245584,1.35282597214308,2.72746120590835,1.14721838155602,12.6852654374779,14.9758638203278,13.5946913157337,12.1283434367983,16.4008553069158,25.1834377762323,1.56449532329816,1.28648187638577,2.76269842704961,0,0,17.9826336060563,17.3642230780445,15.6657169424263,17.3161537189858,13.944284421914,13.7616959084436,12.9438055833758,13.1468381633982,12.6966561792309,1.4763109092493,1.40241773803446,2.8810180793198,1.47008711385542,0,0.982827216677626,0.590789906681404,18.98291327483,22.5068842533898,9.09309394582185,0.658501712451753,1.1240175325762,4.72486170334665,2.4998880192803,2.6064664424826,0,4.3299402607582,11.7089709024828,1.17408694235822,4.76409277611544,3.24089858803628,4.75635380586496,3.95102198979638,10.3018339451385,0.984868024349589,2.34004265139238,6.98566462757023,1.87467667973554,1.17587489739202,2.83550194484773,26.4197641973402,17.4380363108377,6.9008882249738,4.92663237895944,8.80484340132261,0.414656231081544,0.144119953416961,0.25248486685276,23.3672250995182,3.05590740446622,3.51652341630141,1.71072446022705,8.7403368797825,15.6178390078837,4.85904935471983,8.40983132590205,3.48768055066624,36.0824366239074,0.129271715757778,0,12.67954128834,2.12750493267896,1.04007436911366,4.8869401109807,4.25547396069835,4.79559922228979,2.28764789853036,0,2.46972101034231,12.7037111874557,1.06617584622764,14.2551337128017,0,0,1.89948683245908,0,0,0,5.27174682081482,0,5.70547620162874,5.64647096003559,5.13690806375959,10.0274139414342,9.52723723944982,0.591092280605782,0.431255149719035,0.256686072559497,17.53252907135,3.90419561572865,1.54657762555539,8.54332953205179,5.10351001322531,1.49801404789436,2.99161459204025,1.65766205374414,0,2.00068208423871,1.35632511849868,0.831883446123229,3.39015078714607,1.89242898040722,4.21709093973768,0.300946099727719,0,1.03473071292505,19.2625423575277,5.34670588770939,13.9013783148933,0,0,0.206768026122887,0.431428401637234,0.320182673410333,2.72814814301633,8.32177197552485,4.5358543999452,0,2.14846762603287,1.12264037773229,0.256278298511402,1.53512174720011,0,0,12.9536142794231,6.74734556189883,18.067974323038,9.34657972530518,11.96966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| |||
|short_description=p2@NDC80 | |||
}} |
Latest revision as of 03:18, 19 September 2015
Short description: | p2@NDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NDC80_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000543946_5end |
EntrezGene: | NDC80 |
HGNC: | 16909 |
UniProt: | F5H1J6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.33e-12 | 253 |
neural cell | 2.86e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.26e-46 | 235 |
disease of cellular proliferation | 2.54e-45 | 239 |
cell type cancer | 1.58e-26 | 143 |
carcinoma | 3.00e-22 | 106 |
organ system cancer | 2.15e-19 | 137 |
hematologic cancer | 2.27e-12 | 51 |
immune system cancer | 2.27e-12 | 51 |
leukemia | 1.00e-08 | 39 |