FFCP PHASE1:Hg19::chr18:29175078..29175088,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:29175078..29175088,+ | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_at_chr18:29175078..29175088,+ | |||
|id=chr18:29175078..29175088,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.35e-09;11!UBERON:0009497;1.09e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!4.85e-26!3;UBERON:0005290!4.85e-26!3;UBERON:0010096!4.85e-26!3;UBERON:0001905!1.73e-17!2;UBERON:0002757!1.73e-17!2;UBERON:0010134!1.73e-17!2;UBERON:0002784!1.73e-17!2;UBERON:0005408!1.73e-17!2;UBERON:0001899!1.73e-17!2;UBERON:0002298!5.72e-17!8;UBERON:0007023!1.37e-13!115;UBERON:0005743!1.58e-11!86;UBERON:0004733!2.20e-11!12;UBERON:0002028!2.20e-11!12;UBERON:0007277!2.20e-11!12;UBERON:0004732!1.61e-10!13;UBERON:0000073!2.86e-10!94;UBERON:0001016!2.86e-10!94;UBERON:0001049!2.88e-10!57;UBERON:0005068!2.88e-10!57;UBERON:0006241!2.88e-10!57;UBERON:0007135!2.88e-10!57;UBERON:0001017!3.81e-10!82;UBERON:0000955!4.41e-10!69;UBERON:0006238!4.41e-10!69;UBERON:0002616!6.99e-10!59;UBERON:0002336!8.91e-10!1;UBERON:0001018!8.91e-10!1;UBERON:0002473!8.91e-10!1;UBERON:0005340!8.91e-10!1;UBERON:0002316!8.91e-10!1;UBERON:0003544!8.91e-10!1;UBERON:0001020!8.91e-10!1;UBERON:0005970!8.91e-10!1;UBERON:0002437!8.91e-10!1;UBERON:0003075!9.54e-10!86;UBERON:0007284!9.54e-10!86;UBERON:0002346!3.07e-09!90;UBERON:0003296!3.30e-09!4;UBERON:0010133!3.30e-09!4;UBERON:0003076!3.87e-09!15;UBERON:0003057!3.87e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;1.26e-30;3!UBERON:0005290;1.26e-30;3!UBERON:0002298;7.23e-16;6!UBERON:0002360;2.07e-12;2!UBERON:0000094;2.07e-12;2!UBERON:0010743;2.07e-12;2!UBERON:0002107;4.22e-11;19!UBERON:0006925;4.22e-11;19!UBERON:0002114;1.30e-08;2!UBERON:0002423;1.37e-08;25!UBERON:0004733;2.05e-08;12!UBERON:0002028;2.05e-08;12!UBERON:0004732;7.76e-08;13!UBERON:0002365;6.55e-07;31!UBERON:0002330;6.55e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.26e-30,3;UBERON:0005290,1.26e-30,3;UBERON:0010096,1.26e-30,3;UBERON:0002298,7.23e-16,6;UBERON:0002360,2.07e-12,2;UBERON:0000094,2.07e-12,2;UBERON:0010743,2.07e-12,2;UBERON:0002107,4.07e-11,19;UBERON:0006925,4.07e-11,19;UBERON:0008836,4.07e-11,19;UBERON:0008835,1.09e-09,22;UBERON:0003894,1.09e-09,22;UBERON:0009854,2.70e-09,23;UBERON:0007499,1.34e-08,25;UBERON:0009497,1.34e-08,25;UBERON:0000015,1.34e-08,25;UBERON:0002423,1.34e-08,25;UBERON:0006235,1.34e-08,25;UBERON:0004161,1.34e-08,25;UBERON:0002114,1.51e-08,2;UBERON:0004733,2.05e-08,12;UBERON:0002028,2.05e-08,12;UBERON:0007277,2.05e-08,12;UBERON:0009856,2.72e-08,26;UBERON:0004732,7.76e-08,13;UBERON:0002365,4.77e-07,31;UBERON:0002330,4.77e-07,31;UBERON:0003076,6.59e-07,15;UBERON:0003057,6.59e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,1.32506888912221,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4681839138014,5.21366542223206,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:29175078..29175088,+ | |||
}} |
Latest revision as of 00:20, 26 July 2015
Short description: | p@chr18:29175078..29175088, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:29175078..29175088, + |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.26e-30 | 3 |
myelencephalon | 1.26e-30 | 3 |
future myelencephalon | 1.26e-30 | 3 |
brainstem | 7.23e-16 | 6 |
meninx | 2.07e-12 | 2 |
membrane organ | 2.07e-12 | 2 |
meningeal cluster | 2.07e-12 | 2 |
liver | 4.07e-11 | 19 |
digestive gland | 4.07e-11 | 19 |
liver bud | 4.07e-11 | 19 |
hepatic diverticulum | 1.09e-09 | 22 |
liver primordium | 1.09e-09 | 22 |
digestive tract diverticulum | 2.70e-09 | 23 |
epithelial sac | 1.34e-08 | 25 |
epithelium of foregut-midgut junction | 1.34e-08 | 25 |
anatomical boundary | 1.34e-08 | 25 |
hepatobiliary system | 1.34e-08 | 25 |
foregut-midgut junction | 1.34e-08 | 25 |
septum transversum | 1.34e-08 | 25 |
duodenum | 1.51e-08 | 2 |
segmental subdivision of hindbrain | 2.05e-08 | 12 |
hindbrain | 2.05e-08 | 12 |
presumptive hindbrain | 2.05e-08 | 12 |
sac | 2.72e-08 | 26 |
segmental subdivision of nervous system | 7.76e-08 | 13 |
exocrine gland | 4.77e-07 | 31 |
exocrine system | 4.77e-07 | 31 |
posterior neural tube | 6.59e-07 | 15 |
chordal neural plate | 6.59e-07 | 15 |