FFCP PHASE1:Hg19::chr19:1038526..1038570,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:1038526..1038570,+ | |||
|coexpression_cluster_id=C2473 | |||
|description=CAGE_peak_at_chr19:1038526..1038570,+ | |||
|id=chr19:1038526..1038570,+ | |||
|ontology_enrichment_celltype=CL:0002371!3.35e-23!591;CL:0000144!3.89e-22!625;CL:0000003!5.45e-17!722;CL:0000548!2.71e-14!679;CL:0000004!2.71e-14!679;CL:0000255!2.71e-14!679;CL:0000055!3.04e-14!180;CL:0000012!1.32e-13!682;CL:0000034!2.17e-12!444;CL:0000048!2.92e-12!430;CL:0000723!3.98e-12!436;CL:0000183!3.13e-10!59;CL:0000393!7.16e-10!60;CL:0000211!7.16e-10!60;CL:0000680!1.47e-09!57;CL:0000056!1.47e-09!57;CL:0000355!1.47e-09!57;CL:0000192!3.25e-09!42;CL:0000514!3.25e-09!42;CL:0000187!4.69e-09!54;CL:0000222!3.84e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000192;8.80e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,3.74e-12,441;CL:0000723,1.11e-11,433;CL:0000048,1.63e-11,427;CL:0000393,3.86e-10,61;CL:0000211,3.86e-10,61;CL:0000680,6.74e-10,58;CL:0000056,6.74e-10,58;CL:0000355,6.74e-10,58;CL:0000192,1.72e-09,43;CL:0000514,1.72e-09,43;CL:0000187,2.36e-09,55;CL:0000222,2.14e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;8.80e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.16e-09!82;UBERON:0005256!4.28e-09!143;UBERON:0000914!1.20e-08!83;UBERON:0002329!1.20e-08!83;UBERON:0003077!1.20e-08!83;UBERON:0003059!1.20e-08!83;UBERON:0007282!1.20e-08!83;UBERON:0009618!1.20e-08!83;UBERON:0007285!1.20e-08!83;UBERON:0001134!4.55e-08!61;UBERON:0002036!4.55e-08!61;UBERON:0003082!4.55e-08!61;UBERON:0004290!7.03e-08!70;UBERON:0002385!1.29e-07!63;UBERON:0001015!1.29e-07!63;UBERON:0000383!1.29e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,8.92e-10,78;UBERON:0000486,1.02e-09,83;UBERON:0001134,2.35e-08,62;UBERON:0002036,2.35e-08,62;UBERON:0003082,2.35e-08,62;UBERON:0007524,5.29e-08,73;UBERON:0002329,5.46e-08,71;UBERON:0003059,5.46e-08,71;UBERON:0007282,5.46e-08,71;UBERON:0004290,5.46e-08,71;UBERON:0009618,5.46e-08,71;UBERON:0000926,7.78e-08,315;UBERON:0004120,7.78e-08,315;UBERON:0006603,7.78e-08,315;UBERON:0003077,1.29e-07,72;UBERON:0007285,1.29e-07,72;UBERON:0002385,1.54e-07,64;UBERON:0001015,1.54e-07,64;UBERON:0000383,1.54e-07,64 | |||
|phase1_expression=12.3541297903979,10.9191267184401,5.3562673556469,7.00513088471913,10.7270662662549,11.3404008133048,27.8629865985142,5.05375898741465,3.13422753839806,4.17747692052565,27.9120467188971,0.436882744260345,3.16520373874144,5.5694858832021,3.31397375727916,11.4295274896802,12.6565850885035,8.76372108464848,9.27072317701963,3.69363174230364,6.5280221198161,6.89600387251793,2.28988789704845,2.18999080116615,1.63205431473244,0.534893840235659,1.31360943119913,0.708397031823113,2.36018566109342,0.383829398097213,0.928896739896456,2.75826367343678,2.409647350226,0.739508020333575,0.154934401160603,0.426507697462265,0,0.553995408531877,1.60435557976113,1.51907609501096,0.895661896959697,0,0,2.90796477559129,0.377875943688809,1.94067248950253,0.697287110717054,0.822335776043652,1.23882548358041,0.863077176966451,1.0246428261164,2.60130452877444,1.72372840368309,2.5819387343353,0,3.76484679085209,1.09162460023138,1.12361742222542,2.14258724659632,2.88836124368484,3.83602275479425,1.64925650093358,2.59302754908121,0.426224750532694,1.7412554317715,0,1.24564449799115,1.7587406567972,1.0429658368404,3.04064382587163,1.81619850790011,1.47311054395026,1.89877432464531,1.90129757680748,3.18906449947565,1.46761051855863,2.3589012540764,2.25265339262259,1.76798145366788,0.570025487482497,3.77941686678271,1.46131323011707,1.75996244461323,1.63841583378639,0.889509253863555,2.13365111283254,1.60158394814405,0,2.64417949113945,0.954053754535364,1.70763890732835,1.76171156811282,0.764546456250458,0,0,1.05353633910031,0.983548850569165,4.32311839024081,1.64481199199607,2.67498392625085,0.977766799900771,0.473447805734733,1.94826728407911,5.9047542149142,2.06224135232386,3.32300841875432,7.31170432165542,3.97083091149593,2.86130564631732,2.46656856905514,4.97430032014527,5.21645554323094,3.85545064221357,4.54819407752512,3.1360657141493,6.34532319106371,2.29932296161153,1.71813722741315,6.57851199250707,2.22995790026868,1.30216690771284,0,2.86092726247768,1.53583933385302,1.24930726552346,1.18388626022008,3.28451198768419,2.01606743224732,2.94184215361858,1.44824403882799,4.87613732627923,2.68280343881454,2.42938867502708,2.53007406669196,3.00802746381534,7.24232594804119,0,0,3.21418378357831,4.65631734671384,5.18225235589444,0.72038491523742,3.64295288292542,1.85392221392215,1.62273696827342,0.870648686496336,1.32957960518865,0.476981248610684,0,0,0.39752481473341,0,1.04142150482278,1.13061588384802,3.35599548967925,5.50236083880135,0.417989933073621,1.29208379584664,1.06729878806013,0.33472061276467,4.83395180530976,0.760272105718513,4.88124115096339,1.10298924103761,10.5318453224629,0.803697554556718,0.22452937262617,0.450445921933289,0,2.84779697870439,0.732806975721629,3.9534125230819,3.87780264148325,1.3082821564276,2.48485975847659,6.45815609489357,1.45650098894541,0.860509862246441,1.77334191099179,5.60677600142307,7.47242970107935,12.333377420858,1.55605517699883,1.34710672069688,0.490385709340376,2.11900398702904,2.30470369792,1.40592859100278,2.18512053781224,0,2.24173020827702,0.822041490506354,0.809364721840658,1.54495887372473,0.408308342509787,1.71968044236475,0.516628905878827,4.75201142912821,15.5778165445491,0,5.74894513452991,0.841680569770331,0.875829639103749,0.277064115484183,4.82875382968922,15.324389789951,4.6573798261045,4.8775838758809,3.22901344239952,5.76604949810132,4.4505699243508,1.50045548042201,3.29768093563004,3.60696756063881,3.53622027030021,1.18143432568886,4.09235421677034,1.7670364197088,4.60249493211497,2.42469085228218,2.84007674013291,2.72030665214629,1.69560592310488,2.31913023795956,3.27295344709002,2.00763216772303,3.41526377162867,1.72288698817931,3.60201222895507,2.07322110030741,4.79409616663694,2.55484151353081,1.56449532329816,33.44852878603,2.76269842704961,12.5379340568634,10.1063127433742,1.53798840051797,1.85443159085912,0.723033089650446,1.98529150918309,1.30727666455444,0.949082476444386,0.943819157121151,0.392442930250692,1.92373578473195,3.69077727312324,9.81692416624121,2.057870056657,5.88034845542168,1.26755034821831,0.982827216677626,0.590789906681404,1.32438929824395,1.10689594688802,12.0097467208968,5.81676512665715,0,4.12168786887686,3.51836091602412,0,1.03993478527958,5.77325368101093,3.4779121492523,2.93521735589554,1.58803092537181,5.55582615091933,2.09279567458058,0,0.858486162094873,0.492434012174795,0.702012795417713,0.297262324577456,0,5.03946384596579,3.54437743105966,1.61205340865127,2.3250715081117,1.53353071666084,0.492663237895943,1.58487181223807,2.48793738648926,1.15295962733569,1.8936365013957,0.190493682876507,3.4378958300245,0,1.71072446022705,0.411309970813294,1.20137223137567,0.857479297891735,1.79409734952577,3.05172048183296,2.42016343209135,2.32689088364,21.4593867511129,5.917119267892,3.72313363218819,7.28052058379563,2.05765899409714,0,2.66422179016099,8.14974563851441,7.05408087008876,4.93944202068461,2.28015329005615,6.39705507736582,6.33561498346743,6.02878754119172,2.61460037580088,2.7992437530976,2.43247561282381,1.004514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| |||
|short_description=p@chr19:1038526..1038570,+ | |||
}} |
Latest revision as of 02:55, 26 July 2015
Short description: | p@chr19:1038526..1038570, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1038526..1038570, + |
Coexpression cluster: | C2473_Hair_Alveolar_Aortic_Astrocyte_Mesenchymal_Neutrophils_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 3.74e-12 | 441 |
somatic stem cell | 1.11e-11 | 433 |
multi fate stem cell | 1.63e-11 | 427 |
electrically responsive cell | 3.86e-10 | 61 |
electrically active cell | 3.86e-10 | 61 |
muscle precursor cell | 6.74e-10 | 58 |
myoblast | 6.74e-10 | 58 |
multi-potent skeletal muscle stem cell | 6.74e-10 | 58 |
smooth muscle cell | 1.72e-09 | 43 |
smooth muscle myoblast | 1.72e-09 | 43 |
muscle cell | 2.36e-09 | 55 |
mesodermal cell | 2.14e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 8.92e-10 | 78 |
multilaminar epithelium | 1.02e-09 | 83 |
skeletal muscle tissue | 2.35e-08 | 62 |
striated muscle tissue | 2.35e-08 | 62 |
myotome | 2.35e-08 | 62 |
dense mesenchyme tissue | 5.29e-08 | 73 |
somite | 5.46e-08 | 71 |
presomitic mesoderm | 5.46e-08 | 71 |
presumptive segmental plate | 5.46e-08 | 71 |
dermomyotome | 5.46e-08 | 71 |
trunk paraxial mesoderm | 5.46e-08 | 71 |
mesoderm | 7.78e-08 | 315 |
mesoderm-derived structure | 7.78e-08 | 315 |
presumptive mesoderm | 7.78e-08 | 315 |
paraxial mesoderm | 1.29e-07 | 72 |
presumptive paraxial mesoderm | 1.29e-07 | 72 |
muscle tissue | 1.54e-07 | 64 |
musculature | 1.54e-07 | 64 |
musculature of body | 1.54e-07 | 64 |