FFCP PHASE1:Hg19::chr19:14049184..14049242,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79883 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26275 | |||
|TSSclassifier=strong | |||
|UniProt=A8K3W6,B7Z3M0,Q6PEZ8 | |||
|association_with_transcript=46bp_to_ENST00000339560,NM_024825,uc002mxr.2_5end | |||
|cluster_id=chr19:14049184..14049242,- | |||
|coexpression_cluster_id=C1421 | |||
|description=CAGE_peak_1_at_PODNL1_5end | |||
|id=chr19:14049184..14049242,- | |||
|ontology_enrichment_celltype=CL:0000055!3.85e-31!180;CL:0000057!9.87e-19!75;CL:0002620!3.29e-09!23;CL:0000680!1.07e-08!57;CL:0000056!1.07e-08!57;CL:0000355!1.07e-08!57;CL:0000183!3.35e-08!59;CL:0000187!8.47e-08!54 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.24e-11;23!CL:0000057;4.67e-09;73!CL:0000499;1.12e-07;28!CL:0000327;4.72e-07;15!CL:0000153;8.54e-07;9!CL:0000447;8.54e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.23e-22,76;CL:0002620,3.02e-11,23;CL:0000048,3.64e-09,427;CL:0000723,5.72e-09,433;CL:0000034,2.96e-08,441;CL:0000499,1.11e-07,28;CL:0000680,2.09e-07,58;CL:0000056,2.09e-07,58;CL:0000355,2.09e-07,58;CL:0000327,4.92e-07,15;CL:0000153,8.74e-07,9;CL:0000447,8.74e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.52e-19!365;UBERON:0000914!8.72e-10!83;UBERON:0002329!8.72e-10!83;UBERON:0003077!8.72e-10!83;UBERON:0003059!8.72e-10!83;UBERON:0007282!8.72e-10!83;UBERON:0009618!8.72e-10!83;UBERON:0007285!8.72e-10!83;UBERON:0000481!1.17e-09!347;UBERON:0000468!5.84e-09!659;UBERON:0003102!1.02e-08!95;UBERON:0000486!2.56e-08!82;UBERON:0004290!9.56e-08!70;UBERON:0001134!1.00e-07!61;UBERON:0002036!1.00e-07!61;UBERON:0003082!1.00e-07!61;UBERON:0002385!1.73e-07!63;UBERON:0001015!1.73e-07!63;UBERON:0000383!1.73e-07!63;UBERON:0005256!3.69e-07!143;UBERON:0000033!4.40e-07!123;UBERON:0002199!8.09e-07!45;UBERON:0002416!8.09e-07!45;UBERON:0000153!8.31e-07!129;UBERON:0007811!8.31e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.47e-09;9!UBERON:0000042;2.47e-09;9!UBERON:0003688;1.25e-08;6!UBERON:0002358;1.25e-08;6!UBERON:0003684;1.25e-08;6!UBERON:0001178;1.25e-08;6!UBERON:0002384;1.68e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.75e-10,99;UBERON:0003688,1.33e-08,6;UBERON:0002358,1.33e-08,6;UBERON:0003684,1.33e-08,6;UBERON:0001178,1.33e-08,6;UBERON:0002199,2.80e-08,46;UBERON:0002416,2.80e-08,46;UBERON:0002097,3.26e-08,41;UBERON:0003104,2.05e-07,160;UBERON:0009142,2.05e-07,160;UBERON:0002384,5.34e-07,371;UBERON:0007524,8.41e-07,73 | |||
|phase1_expression=13.4442000660212,13.274232481241,8.03440103347036,29.0212565224078,13.4088328328186,21.8084631025092,17.7309914717817,0,0,0.491467873003018,0,0,0.791300934685361,4.45558870656168,4.63956326019082,0.672325146451775,2.41077811209591,0,0,2.83178433576612,1.02000345622126,5.32873026512749,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0,8.31310050484502,6.01605492763067,14.3398053771215,7.95285947051099,26.2782829963423,1.60709189178915,0.665188192387692,1.14185221401064,0.523916301990851,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,2.61656431285521,12.424298792383,1.64619665163954,0.529636723252875,6.02356903572509,1.06400514659507,0,1.06748995729705,5.67335361359468,1.24484414159907,0,0,1.05950199351452,0.576175924479999,0.937285727335186,0.312160076830321,1.71141546463335,0.298897361103602,0,0,0,1.02077085627447,0.61417158655884,3.09977343527296,5.94001428641027,9.89067717114228,3.64064544775211,7.18618141816238,0,0.375355559615893,0,4.82875382968922,4.59731693698529,9.76547382892879,0,5.202299434977,14.5219024396626,4.66250182551036,6.30191301777245,8.14114980983667,8.75977836155139,9.86419338557426,3.37552664482532,13.0565586916006,6.31084435610286,14.1756843909141,6.30419621593366,7.81021103536552,5.84362169720314,2.03472710772585,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,4.69348596989448,10.935095949279,0,8.35862270457562,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,8.82052268313252,0,0,0,0,0,0,0,0,0,1.75918045801206,1.3032332212413,3.11980435583874,0,0.695582429850461,3.63966952131047,0,0,0,0,0,0,0,0,0,1.17587489739202,0.141775097242386,0.447792613514241,0.871901815541886,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0,7.49775951395111,67.9547247118577,0,4.25500986535793,3.12022310734098,0.771622122786426,0,0.266422179016099,7.00592168924923,17.9065129779176,8.23240336780769,0.325736184293735,7.10783897485092,3.16780749173372,0,0.871533458600294,0,0,0,0,0.239624855491583,4.59447743336456,4.27910715122155,1.30303176000821,1.2328579353023,2.68591444859843,0,0,0,0,0,0,0,0,0,0,0,0,7.72956397830581,7.50255781589516,1.35632511849868,3.11956292296211,5.53129865271201,10.0929545621718,5.15422225967938,10.5331134904702,18.1926003244788,5.17365356462525,3.98535359121262,3.87175253937577,3.30157734978715,0.391602314925481,0.343143423810856,0,0,0,0,0,0,12.1572825831201,14.5788874623659,21.0495070824805,9.48229704492187,16.8863392192012,14.4768529029247,17.8101679733989,0.308419387605311,1.06537035187876,0.246381468041427,0,0.232420756919918,0,0.200506470303285,0,4.36294903025506,0.728364672026868,3.93373244878272,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.812839312631559,2.00675909541941,0,0,0,0,0,0,0.984043937099117,3.25378394664303,0.9273691048295,0.640986253728404,0.247528499761764,2.29706215198469,0,4.82051789532479,1.64340221096607,0.308097234229289,0.307007349452259,0.137836572484531,4.94133126394059,4.0604674295984,0.426133137080504,3.02708921198907,1.65284915360978,1.92190067365106,2.16941611240793,2.32662895967765,7.43752878875657,10.0739950985805,0,0,0,4.34966496037536,1.48259375283136,0.286249773483982,0.372158369359667,1.2655176988749,2.66882271493355,3.07077349573601,0,1.59101623962968,0,5.03642881233281,4.94166653524899,3.53437207037059,0.404364963146632,0,0,10.2403085208814,0.487426979262569,1.05650146756755,2.32049849393576,7.7772987574542,0,1.65409603063837,0.66343897524122,0,0,1.9676842561399,0,0.6196469961995,0.845086807596724,3.01163839628508,11.6916358805614,0.7133421029625,0,8.02209014131124,10.208141681757,0.75894634753143,3.84928192269481,0.192444225451024,0,0,0.941438007767792,0.86101074534246,1.68471475667626,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.422008249231538,0.556543525114529,0,0,3.78571177677032,0.552567831062295,0,0.409074730008619,0,0.622079175323615,0,0,0,0.0986434056369336,0,3.33410970433911,0,0.371072392647405,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.552896299656123,0.295547618953547,0.438770794307945,0,0,1.15425387755696,3.76008784295104,0,0,0,0.638002319463839,0.732780747214898,1.5991043280559,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.606610196826093,0,0,0,0,0,0,0,0,5.30767268879299,0,0,0,0,0,0,0,0,0,0.783939179315021,0,0.52418000472609,0,0.0967563312890851,0,0,0.0969890164884194,0.794305140223502,2.71176888936639,0.685209623233754,0.19871461170299,0.316553979779393,0,7.6150879238957,1.49417096317547,0.19980960958213,0,0.114536596165916,0,0,0,0.235694034616795,3.53350935791397,4.18411385249333,1.63197148218115,3.4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| |||
|short_description=p1@PODNL1 | |||
}} |
Latest revision as of 03:02, 16 September 2015
Short description: | p1@PODNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PODNL1_5end |
Coexpression cluster: | C1421_Mesenchymal_Preadipocyte_Fibroblast_tenocyte_Adipocyte_Osteoblast_Nucleus |
Association with transcript: | 46bp_to_ENST00000339560, NM_024825, uc002mxr.2_5end |
EntrezGene: | PODNL1 |
HGNC: | 26275 |
UniProt: | A8K3W6B7Z3M0Q6PEZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.23e-22 | 76 |
skin fibroblast | 3.02e-11 | 23 |
multi fate stem cell | 3.64e-09 | 427 |
somatic stem cell | 5.72e-09 | 433 |
stem cell | 2.96e-08 | 441 |
stromal cell | 1.11e-07 | 28 |
muscle precursor cell | 2.09e-07 | 58 |
myoblast | 2.09e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.09e-07 | 58 |
extracellular matrix secreting cell | 4.92e-07 | 15 |
GAG secreting cell | 8.74e-07 | 9 |
carbohydrate secreting cell | 8.74e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.75e-10 | 99 |
omentum | 1.33e-08 | 6 |
peritoneum | 1.33e-08 | 6 |
abdominal cavity | 1.33e-08 | 6 |
visceral peritoneum | 1.33e-08 | 6 |
integument | 2.80e-08 | 46 |
integumental system | 2.80e-08 | 46 |
skin of body | 3.26e-08 | 41 |
mesenchyme | 2.05e-07 | 160 |
entire embryonic mesenchyme | 2.05e-07 | 160 |
connective tissue | 5.34e-07 | 371 |
dense mesenchyme tissue | 8.41e-07 | 73 |