FFCP PHASE1:Hg19::chr8:71316428..71316459,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:71316428..71316459,-
|short_description=p2@NCOA2
|description=CAGE_peak_2_at_NCOA2_5end
|association_with_transcript=-388bp_to_ENST00000452400_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10499 | |EntrezGene=10499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7669 | |HGNC=7669 | ||
|TSSclassifier=strong | |||
|UniProt=Q15596 | |UniProt=Q15596 | ||
|association_with_transcript=-388bp_to_ENST00000452400_5end | |||
|cluster_id=chr8:71316428..71316459,- | |||
|description=CAGE_peak_2_at_NCOA2_5end | |||
|id=chr8:71316428..71316459,- | |||
|ontology_enrichment_celltype=CL:0000738!2.52e-43!140;CL:0000037!4.30e-43!172;CL:0000566!4.30e-43!172;CL:0002032!9.15e-41!165;CL:0000837!9.15e-41!165;CL:0000988!3.99e-39!182;CL:0002087!1.27e-37!119;CL:0002031!3.16e-37!124;CL:0000766!2.15e-29!76;CL:0000763!1.73e-27!112;CL:0000049!1.73e-27!112;CL:0002057!2.22e-26!42;CL:0000839!3.74e-25!70;CL:0000557!6.57e-25!71;CL:0000860!1.36e-24!45;CL:0002194!2.27e-24!63;CL:0000576!2.27e-24!63;CL:0000040!2.27e-24!63;CL:0000559!2.27e-24!63;CL:0002009!2.70e-24!65;CL:0000838!6.30e-12!52;CL:0000542!8.77e-12!53;CL:0000051!8.77e-12!53;CL:0000791!1.44e-07!18;CL:0000789!1.44e-07!18;CL:0002420!1.44e-07!18;CL:0002419!1.44e-07!18;CL:0000790!1.44e-07!18;CL:0002393!8.62e-07!9;CL:0002397!8.62e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.81e-22;33!CL:0002057;1.81e-22;33!CL:0000576;6.66e-21;48!CL:0000473;2.70e-20;39!CL:0000234;2.70e-20;39!CL:0000766;3.62e-17;69!CL:0002087;1.59e-13;104!CL:0000738;3.33e-11;136!CL:0000763;8.37e-11;100!CL:0000791;1.27e-08;18!CL:0000789;1.27e-08;18!CL:0002419;1.27e-08;18!CL:0000988;1.99e-08;177!CL:0000094;2.18e-07;8!CL:0000542;2.83e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.36e-51,136;CL:0000037,1.50e-48,168;CL:0002032,7.92e-46,161;CL:0000837,7.92e-46,161;CL:0000988,4.88e-45,177;CL:0002031,1.09e-44,120;CL:0002087,1.17e-44,115;CL:0000766,2.01e-37,72;CL:0000473,2.45e-32,48;CL:0000234,2.45e-32,48;CL:0000839,3.11e-32,66;CL:0000763,5.28e-32,108;CL:0000049,5.28e-32,108;CL:0000557,6.89e-32,67;CL:0002194,1.73e-31,59;CL:0000576,1.73e-31,59;CL:0000040,1.73e-31,59;CL:0000559,1.73e-31,59;CL:0002009,2.60e-31,61;CL:0000860,5.78e-31,42;CL:0002057,5.78e-31,42;CL:0000838,9.63e-13,52;CL:0000542,3.47e-12,53;CL:0000051,3.47e-12,53;CL:0000791,1.12e-08,18;CL:0000789,1.12e-08,18;CL:0002420,1.12e-08,18;CL:0002419,1.12e-08,18;CL:0000790,1.12e-08,18;CL:0002393,9.29e-08,9;CL:0002397,9.29e-08,9;CL:0000094,2.16e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.70e-22;42!CL:0000049;1.02e-09;108!CL:0000790;1.27e-08;18!CL:0000051;2.83e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.55e-26!102;UBERON:0003061!4.55e-26!102;UBERON:0002193!1.11e-21!112;UBERON:0002371!2.67e-19!80;UBERON:0002405!2.12e-18!115;UBERON:0001474!4.72e-18!86;UBERON:0007023!1.21e-17!115;UBERON:0004765!1.16e-12!101;UBERON:0001434!1.16e-12!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.19e-07;15!UBERON:0000179;1.19e-07;15!UBERON:0000463;1.19e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.06e-34,98;UBERON:0003061,1.06e-34,98;UBERON:0002193,4.72e-30,108;UBERON:0002371,1.60e-26,76;UBERON:0002405,1.33e-23,93;UBERON:0001474,3.50e-23,82;UBERON:0007023,1.23e-18,114;UBERON:0004765,1.48e-18,90;UBERON:0001434,1.44e-14,100;UBERON:0000178,1.64e-07,15;UBERON:0000179,1.64e-07,15;UBERON:0000463,1.64e-07,15 | |||
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| ||
|short_description=p2@NCOA2 | |||
}} | }} |
Latest revision as of 00:14, 19 September 2015
Short description: | p2@NCOA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NCOA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -388bp_to_ENST00000452400_5end |
EntrezGene: | NCOA2 |
HGNC: | 7669 |
UniProt: | Q15596 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.06e-34 | 98 |
blood island | 1.06e-34 | 98 |
hemolymphoid system | 4.72e-30 | 108 |
bone marrow | 1.60e-26 | 76 |
immune system | 1.33e-23 | 93 |
bone element | 3.50e-23 | 82 |
adult organism | 1.23e-18 | 114 |
skeletal element | 1.48e-18 | 90 |
skeletal system | 1.44e-14 | 100 |
blood | 1.64e-07 | 15 |
haemolymphatic fluid | 1.64e-07 | 15 |
organism substance | 1.64e-07 | 15 |