FFCP PHASE1:Hg19::chr1:155231991..155232005,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10067 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10565 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000465312_5end | |||
|cluster_id=chr1:155231991..155232005,- | |||
|description=CAGE_peak_6_at_SCAMP3_5end | |||
|id=chr1:155231991..155232005,- | |||
|ontology_enrichment_celltype=CL:0000222!5.28e-19!119;CL:0000055!2.21e-17!180;CL:0000220!3.63e-15!246;CL:0002321!8.68e-15!248;CL:0000680!8.78e-14!57;CL:0000056!8.78e-14!57;CL:0000355!8.78e-14!57;CL:0000183!1.73e-13!59;CL:0000187!1.36e-12!54;CL:0000192!1.75e-12!42;CL:0000514!1.75e-12!42;CL:0000548!4.37e-12!679;CL:0000004!4.37e-12!679;CL:0000255!4.37e-12!679;CL:0000012!3.47e-11!682;CL:0000359!5.09e-10!32;CL:0000393!6.10e-10!60;CL:0000211!6.10e-10!60;CL:0000066!1.73e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.79e-10;32!CL:0000192;8.89e-09;43!CL:0000187;2.59e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.39e-19,121;CL:0002321,9.32e-14,250;CL:0000680,1.84e-13,58;CL:0000056,1.84e-13,58;CL:0000355,1.84e-13,58;CL:0000192,2.37e-12,43;CL:0000514,2.37e-12,43;CL:0000187,3.74e-12,55;CL:0000359,3.48e-10,32;CL:0000393,3.01e-09,61;CL:0000211,3.01e-09,61;CL:0000066,2.13e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000514;8.89e-09;43!CL:0000355;1.21e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!7.41e-14!138;UBERON:0002100!2.41e-13!216;UBERON:0002049!6.07e-13!79;UBERON:0007798!6.07e-13!79;UBERON:0001637!6.88e-13!42;UBERON:0003509!6.88e-13!42;UBERON:0004572!6.88e-13!42;UBERON:0000914!8.98e-13!83;UBERON:0002329!8.98e-13!83;UBERON:0003077!8.98e-13!83;UBERON:0003059!8.98e-13!83;UBERON:0007282!8.98e-13!83;UBERON:0009618!8.98e-13!83;UBERON:0007285!8.98e-13!83;UBERON:0001134!1.06e-12!61;UBERON:0002036!1.06e-12!61;UBERON:0003082!1.06e-12!61;UBERON:0000055!1.41e-12!69;UBERON:0004290!1.61e-12!70;UBERON:0002385!9.54e-12!63;UBERON:0001015!9.54e-12!63;UBERON:0000383!9.54e-12!63;UBERON:0003914!1.35e-11!118;UBERON:0001981!2.64e-11!60;UBERON:0007500!2.64e-11!60;UBERON:0004537!2.64e-11!60;UBERON:0006965!2.64e-11!60;UBERON:0000486!3.17e-11!82;UBERON:0004872!1.14e-10!84;UBERON:0003104!1.22e-10!238;UBERON:0009142!1.22e-10!238;UBERON:0005256!2.00e-10!143;UBERON:0000119!4.68e-10!312;UBERON:0000483!6.34e-10!309;UBERON:0004573!8.03e-10!33;UBERON:0004571!8.03e-10!33;UBERON:0000477!1.05e-09!286;UBERON:0000475!1.73e-09!365;UBERON:0004535!1.04e-08!110;UBERON:0001009!1.10e-08!113;UBERON:0000481!1.32e-08!347;UBERON:0000025!2.52e-07!194;UBERON:0004111!2.53e-07!241;UBERON:0001737!5.81e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.55e-10;42!UBERON:0003509;1.55e-10;42!UBERON:0004572;1.55e-10;42!UBERON:0004573;8.23e-09;33!UBERON:0004571;8.23e-09;33!UBERON:0001737;6.90e-08;9!UBERON:0001557;6.90e-08;9!UBERON:0007500;1.85e-07;56!UBERON:0001981;1.85e-07;56!UBERON:0004537;1.85e-07;56!UBERON:0003914;3.98e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.47e-13,42;UBERON:0003509,1.47e-13,42;UBERON:0004572,1.47e-13,42;UBERON:0000490,2.36e-13,148;UBERON:0002049,1.63e-12,78;UBERON:0007798,1.63e-12,78;UBERON:0007503,1.80e-12,78;UBERON:0001134,2.82e-12,62;UBERON:0002036,2.82e-12,62;UBERON:0003082,2.82e-12,62;UBERON:0000055,2.90e-12,68;UBERON:0007524,6.96e-12,73;UBERON:0002329,1.00e-11,71;UBERON:0003059,1.00e-11,71;UBERON:0007282,1.00e-11,71;UBERON:0004290,1.00e-11,71;UBERON:0009618,1.00e-11,71;UBERON:0003077,1.17e-11,72;UBERON:0007285,1.17e-11,72;UBERON:0003914,1.52e-11,117;UBERON:0007500,2.38e-11,59;UBERON:0001981,2.38e-11,59;UBERON:0004537,2.38e-11,59;UBERON:0006965,2.38e-11,59;UBERON:0002385,2.75e-11,64;UBERON:0001015,2.75e-11,64;UBERON:0000383,2.75e-11,64;UBERON:0002100,6.81e-11,199;UBERON:0004872,1.08e-10,83;UBERON:0000486,3.27e-10,83;UBERON:0004573,4.62e-10,33;UBERON:0004571,4.62e-10,33;UBERON:0004535,6.57e-10,109;UBERON:0001009,2.14e-09,112;UBERON:0005256,6.31e-09,122;UBERON:0003104,6.41e-09,160;UBERON:0009142,6.41e-09,160;UBERON:0000119,3.35e-08,309;UBERON:0000483,3.54e-08,306;UBERON:0001737,8.22e-08,9 | |||
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| |||
|short_description=p6@SCAMP3 | |||
}} |
Latest revision as of 12:09, 17 September 2015
Short description: | p6@SCAMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCAMP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000465312_5end |
EntrezGene: | SCAMP3 |
HGNC: | 10565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.39e-19 | 121 |
embryonic cell | 9.32e-14 | 250 |
muscle precursor cell | 1.84e-13 | 58 |
myoblast | 1.84e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.84e-13 | 58 |
smooth muscle cell | 2.37e-12 | 43 |
smooth muscle myoblast | 2.37e-12 | 43 |
muscle cell | 3.74e-12 | 55 |
vascular associated smooth muscle cell | 3.48e-10 | 32 |
electrically responsive cell | 3.01e-09 | 61 |
electrically active cell | 3.01e-09 | 61 |
epithelial cell | 2.13e-07 | 253 |