FFCP PHASE1:Hg19::chr1:173174681..173174702,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7292 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11934 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IV74 | |||
|association_with_transcript=0bp_to_ENST00000367718,uc001giv.2_5end | |||
|cluster_id=chr1:173174681..173174702,- | |||
|coexpression_cluster_id=C725 | |||
|description=CAGE_peak_5_at_TNFSF4_5end | |||
|id=chr1:173174681..173174702,- | |||
|ontology_enrichment_celltype=CL:0002139!1.46e-12!24;CL:1000413!3.34e-11!9;CL:0000071!4.14e-11!18;CL:0002546!4.14e-11!18;CL:0000115!7.60e-09!35;CL:0002544!3.42e-08!6;CL:0000080!3.97e-08!6;CL:0000222!1.75e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:1000413;1.30e-11;9!CL:0002544;1.95e-08;6!CL:0000071;2.77e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,7.24e-12,9;CL:0002544,1.24e-08,6;CL:0000071,1.94e-07,18;CL:0002546,1.94e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;2.77e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.82e-29!110;UBERON:0001009!8.53e-28!113;UBERON:0000178!1.42e-19!15;UBERON:0000179!1.42e-19!15;UBERON:0000463!1.42e-19!15;UBERON:0000055!9.67e-18!69;UBERON:0001981!2.20e-17!60;UBERON:0007500!2.20e-17!60;UBERON:0004537!2.20e-17!60;UBERON:0006965!2.20e-17!60;UBERON:0004872!1.73e-16!84;UBERON:0002049!2.04e-16!79;UBERON:0007798!2.04e-16!79;UBERON:0001637!3.79e-13!42;UBERON:0003509!3.79e-13!42;UBERON:0004572!3.79e-13!42;UBERON:0003915!3.34e-11!9;UBERON:0004700!3.34e-11!9;UBERON:0001917!3.34e-11!9;UBERON:0001986!4.14e-11!18;UBERON:0004638!4.14e-11!18;UBERON:0004852!4.14e-11!18;UBERON:0003914!3.90e-09!118;UBERON:0003081!2.14e-08!216;UBERON:0000487!2.47e-08!22;UBERON:0004573!1.04e-07!33;UBERON:0004571!1.04e-07!33;UBERON:0000490!2.61e-07!138;UBERON:0006914!7.27e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.86e-35;15!UBERON:0000179;4.86e-35;15!UBERON:0000463;4.86e-35;15!UBERON:0002390;3.99e-16;32!UBERON:0003915;1.30e-11;9!UBERON:0004700;1.30e-11;9!UBERON:0001917;1.30e-11;9!UBERON:0002193;8.13e-08;42!UBERON:0004638;2.77e-07;18!UBERON:0001986;2.77e-07;18!UBERON:0004852;2.77e-07;18!UBERON:0001637;5.94e-07;42!UBERON:0003509;5.94e-07;42!UBERON:0004572;5.94e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.46e-35,15;UBERON:0000179,3.46e-35,15;UBERON:0000463,3.46e-35,15;UBERON:0004535,2.48e-15,109;UBERON:0001009,9.93e-15,112;UBERON:0003915,7.24e-12,9;UBERON:0004700,7.24e-12,9;UBERON:0001917,7.24e-12,9;UBERON:0001637,9.24e-08,42;UBERON:0003509,9.24e-08,42;UBERON:0004572,9.24e-08,42;UBERON:0003081,9.77e-08,203;UBERON:0004638,1.94e-07,18;UBERON:0001986,1.94e-07,18;UBERON:0004852,1.94e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.975865597581014,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.708397031823113,1.18009283054671,0.383829398097213,0.464448369948228,0,0,0,0,0,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15106533222573,1.65810010671509,0.579606171470105,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,4.17401055470081,1.72046919021225,1.73570250803797,2.26123176769604,1.67799774483962,0.550236083880135,1.25396979922086,0.775250277507987,0.35576626268671,0.66944122552934,0,0.760272105718513,0,0.735326160691737,0.81014194788176,0.803697554556718,0.22452937262617,0.563057402416611,0,0,1.46561395144326,0,0,0,0,0.759783069987479,0.529636723252875,0.573673241497627,0,0,1.06748995729705,0.49333509683432,0,1.48181739276657,0.163461903113459,0.151357427644931,0,0,0,1.1409436430889,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,2.49550802952046,1.07633781413317,5.33893472046419,0,0,0.309157587715317,0.772921620136887,1.11670113798954,0,0,0.252433774244115,0.828449087780694,0,0.355009592516614,1.10827308050404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587043471179108,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,0,0,0.0895585227028483,0,0,12.3165809473986,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13669490424889,0,0,1.59562869950922,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,2.48649308061621,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,1.44737618286021,0.862856803274467,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0.308419387605311,0,0,0,0,0,0,0,0.34444334449382,0.910455840033585,0,0,0,0,0,0,0,0.510281115829547,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0.464845549297286,0,0,0,0,0,0,1.43124886741991,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0,0.404364963146632,1.58510321173008,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,1.32687795048244,0.438450885253763,0,0,0.608731130888112,0.30982349809975,1.12678241012897,0.430234056612155,0.392996164052485,1.426684205925,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,5.58192370155386,6.88173486428138,5.69647187174163,4.04994018278241,2.87953591160336,6.48473311192717,4.86028293514303,5.55187623405989,0,0,0,0,0.721346064882224,0,0,4.7899049143876,0.383010740264733,9.94865838802249,0,0.280797178113459,2.05411211129873,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,1.22439575525196,0,0,0,0.276283915531148,0,0,0.246169610922139,5.28767299025073,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28236630762607,0,0,1.72678282034527,0,0,0,0,0,0,0,0,0,0,0,0,0,8.30259160305741,6.91958058100416,5.8476291723055,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98989253361951,3.97490815986866,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,4.32359860250884,0,0,0.0824158583811665,0.202210631562555,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0.477890301491107,0,0.465788870628778,0,7.17772629306586,1.04349012362347,0.450772826991655,2.66563648518157,1.62748293281865,0,0.644463342254931,0,5.17524655308201,10.400721881242,0,0,0,0,0,0,0,0,0,1.4327107286519,0,0,0.353378291891762,0,0,0,0,0,0,0.389720617678777,0,0.327130788511688,0,0,0,0.19998739585493,0,0,1.70254786070051,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,1.81382013502883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60330401607244,3.57896299988462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.535928260312357,0,0,0,0,0.193766729508018,0.0620747142958579,1.23345048838675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@TNFSF4 | |||
}} |
Latest revision as of 17:25, 18 September 2015
Short description: | p5@TNFSF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TNFSF4_5end |
Coexpression cluster: | C725_Mast_cord_mycosis_mesenchymal_Endothelial_hepatic_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000367718, uc001giv.2_5end |
EntrezGene: | TNFSF4 |
HGNC: | 11934 |
UniProt: | Q8IV74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 7.24e-12 | 9 |
aortic endothelial cell | 1.24e-08 | 6 |
blood vessel endothelial cell | 1.94e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.94e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
blood | 3.46e-35 | 15 |
haemolymphatic fluid | 3.46e-35 | 15 |
organism substance | 3.46e-35 | 15 |
cardiovascular system | 2.48e-15 | 109 |
circulatory system | 9.93e-15 | 112 |
endothelial tube | 7.24e-12 | 9 |
arterial system endothelium | 7.24e-12 | 9 |
endothelium of artery | 7.24e-12 | 9 |
artery | 9.24e-08 | 42 |
arterial blood vessel | 9.24e-08 | 42 |
arterial system | 9.24e-08 | 42 |
lateral plate mesoderm | 9.77e-08 | 203 |
blood vessel endothelium | 1.94e-07 | 18 |
endothelium | 1.94e-07 | 18 |
cardiovascular system endothelium | 1.94e-07 | 18 |