FFCP PHASE1:Hg19::chr1:236140178..236140220,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:236140178..236140220,- | |||
|coexpression_cluster_id=C932 | |||
|description=CAGE_peak_at_chr1:236140178..236140220,- | |||
|id=chr1:236140178..236140220,- | |||
|ontology_enrichment_celltype=CL:0000055!2.66e-14!180;CL:0000057!8.42e-11!75;CL:0002620!1.95e-08!23;CL:0000115!8.09e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.97e-12;13!CL:0002615;2.60e-09;3!CL:0002564;2.27e-08;3!CL:0002195;4.33e-07;2!CL:0002571;4.33e-07;2!CL:0002549;5.00e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.08e-10,15;CL:0002615,2.63e-09,3;CL:0002564,3.32e-08,3;CL:0002195,4.37e-07,2;CL:0002571,4.37e-07,2;CL:0002549,5.03e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.02e-07!659;UBERON:0002100!2.45e-07!216;UBERON:0004457!6.19e-07!12;UBERON:0000042!6.19e-07!12;UBERON:0005256!8.31e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;5.26e-15;8!UBERON:0000982;5.26e-15;8!UBERON:0004770;5.26e-15;8!UBERON:0011135;4.33e-13;5!UBERON:0002216;4.33e-13;5!UBERON:0011134;4.33e-13;5!UBERON:0002209;4.33e-13;5!UBERON:0002213;4.33e-13;5!UBERON:0007844;4.33e-13;5!UBERON:0011138;4.33e-13;5!UBERON:0001130;4.33e-13;5!UBERON:0001066;4.33e-13;5!UBERON:0001468;4.33e-13;5!UBERON:0002242;2.27e-08;3!UBERON:0004457;2.54e-07;9!UBERON:0000042;2.54e-07;9!UBERON:0005629;5.00e-07;2!UBERON:0005358;5.00e-07;2!UBERON:0001886;5.00e-07;2!UBERON:0004086;5.00e-07;2!UBERON:0005282;5.00e-07;2!UBERON:0005281;5.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.39e-14,8;UBERON:0000982,1.39e-14,8;UBERON:0004770,1.39e-14,8;UBERON:0011135,7.83e-13,5;UBERON:0002216,7.83e-13,5;UBERON:0011134,7.83e-13,5;UBERON:0002209,7.83e-13,5;UBERON:0002213,7.83e-13,5;UBERON:0005856,7.83e-13,5;UBERON:0005866,7.83e-13,5;UBERON:0005863,7.83e-13,5;UBERON:0007844,7.83e-13,5;UBERON:0011138,7.83e-13,5;UBERON:0001130,7.83e-13,5;UBERON:0001066,7.83e-13,5;UBERON:0001468,7.83e-13,5;UBERON:0002242,3.32e-08,3;UBERON:0003068,3.32e-08,3;UBERON:0002328,3.32e-08,3;UBERON:0004880,3.32e-08,3;UBERON:0005629,5.03e-07,2;UBERON:0005358,5.03e-07,2;UBERON:0001886,5.03e-07,2;UBERON:0004086,5.03e-07,2;UBERON:0005282,5.03e-07,2;UBERON:0005281,5.03e-07,2 | |||
|phase1_expression=1.63510541343501,1.49870366723688,2.67813367782345,5.00366491765652,2.23480547213644,3.48935409640147,0,3.15859936713415,2.35067065379855,0.491467873003018,0,0,0,1.11389717664042,3.97676850873499,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0.940364164434263,0,0.136874425072884,0.125542639594803,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0.575384784644301,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0.870627715885752,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,0.722878304769133,0.50133791063589,0.434539556882471,1.5905718941022,0.486634870302636,0.472674085820339,0,0.351339142772504,0.327447688744282,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0,0.760272105718513,3.41686880567437,0,0.81014194788176,0.446498641420399,0.673588117878509,0.450445921933289,0,0,1.09921046358244,0,0,0,0,0.759783069987479,0,4.30254931123221,0,0,0,0.49333509683432,0.933633106199299,0.269421344139376,0.980771418680752,3.48122083583342,13.25204626304,0.937285727335186,0.624320153660641,1.1409436430889,0.896692083310806,0.23486899728753,0.161872944368132,0.280901613404497,0.204154171254893,0.368502951935304,0.309977343527296,0,0.741800787835671,1.82032272387605,0,0.841680569770331,0.375355559615893,0.277064115484183,0,0.30648779579902,0.45071417671979,0.453728732640084,2.69084453533293,1.49490172172997,0.847727604638247,2.10063767259082,0.412210116953756,0.772921620136887,0.930584281657949,0.337552664482532,0.389748020644795,1.00973509697646,0.552299391853796,0.323292113637624,1.06502877754984,0.503760491138201,0.508681776931463,0,0,0,0,0,0.348581828608555,0.414644220061482,0.252320850875628,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0,0,1.26755034821831,0,1.18157981336281,0,0.368965315629341,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,1.17408694235822,0.577465791044295,1.38895653772983,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0.448524337381443,0.87192013766656,0.4400297149257,0,10.7296933755565,2.535908257668,2.39344304926383,0,0.257207374262142,0,0.799266537048298,8.14974563851441,17.3638913725262,0,0.325736184293735,6.04166312862328,0.791951872933429,0,0,0.099972991182057,0,0,0,0.718874566474748,0,0,0.434343920002738,1.43833425785268,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,1.34960640891054,2.50085260529839,1.08506009479894,1.03985430765404,0,0.630809660135739,0.585707074963566,0.300946099727719,0,2.0694614258501,0,0,0.347534457872331,1.95801157462741,2.74514739048685,0,0,0,0,0,0,1.24053903909388,0.306923946576125,1.96462066103151,0.512556597022804,0.511707249066704,0.804269605718038,0,0.154209693802656,0.355123450626254,0.164254312027618,0.519254429183621,0.116210378459959,0.362578348774867,0,0.0920809889358963,1.7222167224691,0.546273504020151,1.04899531967539,0,0.0770153371044148,0,0,0.211103257785751,3.4120015221269,0.170093705276516,2.80690690932781,1.54227252690289,0.812839312631559,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0.462145851343933,0.921022048356777,0.413509717453592,0.644521469209642,1.59518363305651,0.340906509664404,0.356128142586949,0,0,0,0,0,0.31481234683064,0,0.924100740528266,0,0,0,0,0,0,0.38126038784765,0,2.99557291623744,0,0,0.899362287916574,0.274537029736055,0.471249609382746,0.202182481573316,0,0.421258456238981,0,0.731140468893853,1.05650146756755,1.09199929126389,0.989838023675989,0,0.551365343546124,0,0,0,0.655894752046633,0.405820753925408,0.6196469961995,0.845086807596724,0,0.196498082026242,0,0.709522128141196,1.05553817648832,1.31717957183961,0.379473173765715,0.349934720244983,0,0,0,0.753150406214233,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0.684704037099577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0.23056390438806,1.16684937732704,0.651884231532048,0,0.549585560411174,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0.995261931078505,0,3.66618086960175,0,0,0,0,3.21031058919516,0,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.698906672968121,0,0,0,0,0.290967049465258,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.407712618220842,0.313808538937,0.203996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| |||
|short_description=p@chr1:236140178..236140220,- | |||
}} |
Latest revision as of 05:25, 28 July 2015
Short description: | p@chr1:236140178..236140220, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:236140178..236140220, - |
Coexpression cluster: | C932_Mesenchymal_Adipocyte_Endothelial_Fibroblast_Renal_Pericytes_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.08e-10 | 15 |
adipocyte of omentum tissue | 2.63e-09 | 3 |
nucleus pulposus cell of intervertebral disc | 3.32e-08 | 3 |
hepatic stem cell | 4.37e-07 | 2 |
hepatic mesenchymal stem cell | 4.37e-07 | 2 |
fibroblast of choroid plexus | 5.03e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
articulation | 1.39e-14 | 8 |
skeletal joint | 1.39e-14 | 8 |
articular system | 1.39e-14 | 8 |
intervertebral cartilage | 7.83e-13 | 5 |
symphysis | 7.83e-13 | 5 |
nonsynovial joint | 7.83e-13 | 5 |
fibrous joint | 7.83e-13 | 5 |
cartilaginous joint | 7.83e-13 | 5 |
developing mesenchymal condensation | 7.83e-13 | 5 |
pre-cartilage condensation | 7.83e-13 | 5 |
cartilaginous condensation | 7.83e-13 | 5 |
cartilage element | 7.83e-13 | 5 |
post-cranial axial skeletal system | 7.83e-13 | 5 |
vertebral column | 7.83e-13 | 5 |
intervertebral disk | 7.83e-13 | 5 |
intervertebral joint | 7.83e-13 | 5 |
nucleus pulposus | 3.32e-08 | 3 |
axial mesoderm | 3.32e-08 | 3 |
notochord | 3.32e-08 | 3 |
chordamesoderm | 3.32e-08 | 3 |
vascular plexus | 5.03e-07 | 2 |
ventricle of nervous system | 5.03e-07 | 2 |
choroid plexus | 5.03e-07 | 2 |
brain ventricle | 5.03e-07 | 2 |
ventricular system of brain | 5.03e-07 | 2 |
ventricular system of central nervous system | 5.03e-07 | 2 |