FFCP PHASE1:Hg19::chr1:2524278..2524289,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79258 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14668 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENST00000491941_5end | |||
|cluster_id=chr1:2524278..2524289,- | |||
|description=CAGE_peak_3_at_MMEL1_5end | |||
|id=chr1:2524278..2524289,- | |||
|ontology_enrichment_celltype=CL:0002393!4.40e-11!9;CL:0002397!4.40e-11!9;CL:0000624!1.89e-10!6 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.56e-16;6!CL:0000898;8.07e-15;3!CL:0000895;9.60e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.05e-16,6;CL:0000898,6.54e-15,3;CL:0000810,1.19e-11,1;CL:0000895,1.19e-11,1;CL:0002436,1.19e-11,1;CL:0002427,1.19e-11,1;CL:0002428,1.19e-11,1;CL:0002429,1.19e-11,1;CL:0002433,1.19e-11,1;CL:0002431,1.19e-11,1;CL:0002432,1.19e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.45e-12;1!CL:0002427;9.60e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8552;9.60e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,1.07e-11,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;3.45e-12;1!UBERON:0001301;3.45e-12;1!UBERON:0004913;9.60e-12;1!UBERON:0003703;9.60e-12;1!UBERON:0001174;9.60e-12;1!UBERON:0004914;9.60e-12;1!UBERON:0002294;5.59e-07;7!UBERON:0001173;5.59e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,4.06e-12,1;UBERON:0004913,6.26e-12,1;UBERON:0003703,6.26e-12,1;UBERON:0001174,6.26e-12,1;UBERON:0004914,6.26e-12,1;UBERON:0001873,9.44e-07,2;UBERON:0010122,9.44e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0.671746422719773,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0.316462387440884,1.05627643155971,0.637812899895131,0.209658645508376,0.336985893439485,0,0,0.570025487482497,0.59675003159727,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,0,0.786839080455332,1.17903228824749,0.205601498999509,0.83593247695339,1.95553359980154,0.946895611469467,0,0.668462741311041,0.294605907474837,0.664601683750863,0.541607727530031,0.25618263945135,0.130059347559878,0,0.276350017785848,0.869409257205157,1.03800594213442,0.802622484269139,0,0.226618685395132,1.14966148080576,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0,0.821127996921047,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0.380508304469197,0.790204397959275,0,0.246217006087397,0,0,0,0,0,0,0.290633938513962,0,0,0.528290604079356,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.828851746593443,0.503865495708552,0,0,0,0,0.537063524026827,0,0.690503839458535,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,2.77371808838438,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,1.16348177330109,0,0,0,0,1.11255605286265,0,0,0,0,0.995261931078505,0.884575645033392,0,0,0,0,0,0,0.234264445725339,0,1.9566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0,2.27144668714639,0,0,0,0,0.775912131907355,0,0.225980740780532,0,0,0,0.586654148204409,0,2.98834192635094,0,0,0,0.343189995723929,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,2.34454203369928,0,0,1.47856086217045,0,0,0,0,0,0.548257766857182,0,0,1.27762427639595,0,0,0,0,0,0,0,0,0,0,0.222462803784138,1.25588948560822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0.68732060563215,0,0,0,0,0.609589624911347,0,0,0,0.485710993059139,0,0,0,0,0,0.603851374266694,0.231522474323834,0,1.41095188908457,0,0.707029641304878,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.20686599172379,0.639701945702943,0,0,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0,0.202056159043763,0.430333232356058,0.332660356546013,0,0,0,0.179650404213174,0,0.244482888365733,2.03448089157869,0.665756774185513,0,0 | |||
|short_description=p3@MMEL1 | |||
}} |
Latest revision as of 02:28, 17 September 2015
Short description: | p3@MMEL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MMEL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000491941_5end |
EntrezGene: | MMEL1 |
HGNC: | 14668 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 3.05e-16 | 6 |
naive T cell | 6.54e-15 | 3 |
CD4-positive, alpha-beta thymocyte | 1.19e-11 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.19e-11 | 1 |
mature CD4 single-positive thymocyte | 1.19e-11 | 1 |
resting double-positive thymocyte | 1.19e-11 | 1 |
double-positive blast | 1.19e-11 | 1 |
CD69-positive double-positive thymocyte | 1.19e-11 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.19e-11 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.19e-11 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.19e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
epididymis | 4.06e-12 | 1 |
hepatopancreatic ampulla | 6.26e-12 | 1 |
extrahepatic bile duct | 6.26e-12 | 1 |
common bile duct | 6.26e-12 | 1 |
duodenal papilla | 6.26e-12 | 1 |
caudate nucleus | 9.44e-07 | 2 |
future caudate nucleus | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 1.07e-11 | 1 |