FFCP PHASE1:Hg19::chr20:35177635..35177755,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:35177635..35177755,- | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_at_chr20:35177635..35177755,- | |||
|id=chr20:35177635..35177755,- | |||
|ontology_enrichment_celltype=CL:0000055!6.29e-24!180;CL:0000057!3.55e-14!75;CL:0000183!1.69e-12!59;CL:0000680!1.97e-12!57;CL:0000056!1.97e-12!57;CL:0000355!1.97e-12!57;CL:0000192!2.26e-12!42;CL:0000514!2.26e-12!42;CL:0000187!1.28e-11!54;CL:0000222!2.59e-11!119;CL:0000393!4.34e-11!60;CL:0000211!4.34e-11!60;CL:0000359!4.92e-09!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.22e-09;43!CL:0000359;2.78e-09;32!CL:0000187;2.66e-07;55!CL:0000134;6.62e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.03e-14,76;CL:0000680,1.04e-13,58;CL:0000056,1.04e-13,58;CL:0000355,1.04e-13,58;CL:0000192,2.02e-13,43;CL:0000514,2.02e-13,43;CL:0000187,7.87e-13,55;CL:0000393,6.11e-12,61;CL:0000211,6.11e-12,61;CL:0000222,3.96e-11,121;CL:0000359,1.04e-09,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.22e-09;43!CL:0000355;2.53e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.03e-17!143;UBERON:0000468!3.62e-14!659;UBERON:0000914!3.66e-14!83;UBERON:0002329!3.66e-14!83;UBERON:0003077!3.66e-14!83;UBERON:0003059!3.66e-14!83;UBERON:0007282!3.66e-14!83;UBERON:0009618!3.66e-14!83;UBERON:0007285!3.66e-14!83;UBERON:0002385!2.39e-13!63;UBERON:0001015!2.39e-13!63;UBERON:0000383!2.39e-13!63;UBERON:0004290!3.01e-13!70;UBERON:0002100!3.52e-13!216;UBERON:0000486!4.84e-13!82;UBERON:0001134!1.57e-12!61;UBERON:0002036!1.57e-12!61;UBERON:0003082!1.57e-12!61;UBERON:0001009!1.61e-12!113;UBERON:0000481!2.07e-12!347;UBERON:0004535!1.07e-11!110;UBERON:0003104!1.58e-11!238;UBERON:0009142!1.58e-11!238;UBERON:0003914!2.50e-10!118;UBERON:0002049!4.62e-10!79;UBERON:0007798!4.62e-10!79;UBERON:0000467!6.16e-10!625;UBERON:0004872!9.81e-10!84;UBERON:0000480!1.01e-09!626;UBERON:0000475!1.28e-09!365;UBERON:0000926!2.94e-09!448;UBERON:0004120!2.94e-09!448;UBERON:0006603!2.94e-09!448;UBERON:0000490!2.99e-09!138;UBERON:0001981!5.29e-08!60;UBERON:0007500!5.29e-08!60;UBERON:0004537!5.29e-08!60;UBERON:0006965!5.29e-08!60;UBERON:0000055!1.31e-07!69;UBERON:0000922!1.42e-07!612;UBERON:0000119!3.25e-07!312;UBERON:0001637!3.45e-07!42;UBERON:0003509!3.45e-07!42;UBERON:0004572!3.45e-07!42;UBERON:0000483!3.69e-07!309;UBERON:0000477!7.16e-07!286;UBERON:0002050!7.23e-07!605;UBERON:0005423!7.23e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;8.96e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.75e-18,160;UBERON:0009142,1.75e-18,160;UBERON:0005256,1.96e-16,122;UBERON:0007503,1.24e-14,78;UBERON:0002385,2.25e-14,64;UBERON:0001015,2.25e-14,64;UBERON:0000383,2.25e-14,64;UBERON:0007524,6.82e-14,73;UBERON:0001134,1.70e-13,62;UBERON:0002036,1.70e-13,62;UBERON:0003082,1.70e-13,62;UBERON:0002329,2.39e-13,71;UBERON:0003059,2.39e-13,71;UBERON:0007282,2.39e-13,71;UBERON:0004290,2.39e-13,71;UBERON:0009618,2.39e-13,71;UBERON:0003077,2.40e-13,72;UBERON:0007285,2.40e-13,72;UBERON:0000486,1.42e-12,83;UBERON:0001009,9.62e-12,112;UBERON:0000926,3.42e-11,315;UBERON:0004120,3.42e-11,315;UBERON:0006603,3.42e-11,315;UBERON:0004535,6.70e-11,109;UBERON:0002100,6.76e-11,199;UBERON:0003914,1.41e-09,117;UBERON:0004872,2.70e-09,83;UBERON:0002049,5.41e-09,78;UBERON:0007798,5.41e-09,78;UBERON:0000490,5.80e-09,148;UBERON:0001637,2.46e-07,42;UBERON:0003509,2.46e-07,42;UBERON:0004572,2.46e-07,42;UBERON:0007500,2.91e-07,59;UBERON:0001981,2.91e-07,59;UBERON:0004537,2.91e-07,59;UBERON:0006965,2.91e-07,59;UBERON:0007100,4.25e-07,27;UBERON:0001013,9.41e-07,14 | |||
|phase1_expression=45.9646299554508,27.6189675819368,26.6403823741386,80.0586386825043,97.4375185851487,67.1700663557284,119.050942739106,13.2661173419635,9.40268261519419,13.02389863458,30.7032513907868,1.52908960491121,4.22027165165526,3.09415882400117,3.97676850873499,34.9609076154923,28.9293373451509,35.0548843385939,46.8415486838887,1.10808952269109,5.71201935483908,6.89600387251793,3.43483184557268,1.36874425072884,6.90484517771415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,14.5763320501625,42.6498199813788,3.00802746381534,12.31195411167,0,1.94653948121054,4.25406677238305,16.8514342071549,9.57399164055074,10.4128365020682,0.364295288292542,0,2.92092654289215,1.74129737299267,2.79211717089617,0,0,0,0,1.72046919021225,1.38856200643038,0.56530794192401,1.25849830862972,2.20094433552054,1.67195973229448,0.516833518338658,3.91342888955381,1.33888245105868,3.22263453687318,1.52054421143703,6.58967555380058,0.367663080345869,6.48113558305408,0.357198913136319,0.44905874525234,1.35133776579987,1.53316637465883,0,0.549605231791222,0,0,0.872188104285069,69.0791012856493,10.5103324681601,11.2547803691236,3.44203944898576,7.09336764396714,26.3518472066884,14.9448594021587,66.353570524216,2.8008993185979,3.77189881795127,3.59616186849609,2.8757911252537,2.88087962239999,1.87457145467037,12.4864030732128,0.570471821544449,6.27684458317565,0.822041490506354,0.809364721840658,1.26405726032024,1.02077085627447,3.80786383666481,1.85986406116378,17.8200428592308,44.0135134115831,0.910161361938026,20.8399261126709,1.68336113954066,1.12606667884768,1.6623846929051,29.4115005990161,58.2326812018137,31.0992781936655,16.107370008723,5.91985797773244,19.0066076048525,17.8022796974032,6.60200411385685,8.75946498526731,11.8514648420989,19.7283867711485,3.88185564154912,11.4975666090214,13.3789900349381,13.7154348977026,4.0411514204703,14.2003837006646,23.5759909852678,18.1429833772222,1.15956511897978,0.545492241181669,0.573609190778008,3.41526377162867,2.38553582978673,2.32387885739037,2.59152637538426,4.54177531576131,1.45990943630332,12.5159625863853,77.1889125831462,8.28809528114883,24.1471322576629,28.1532997851138,3.785817601275,1.68584690078102,2.6511213287183,3.30881918197182,3.05031221729369,4.50814176311084,3.37078270400411,3.13954344200554,1.15424147083917,2.95262181849859,8.41450642820675,16.8745344645874,33.8120036186747,0,0,1.77236972004421,0,0.614942192715568,4.97546649865724,0.219500570817251,0,0,0.0925884451585296,2.93227474779292,3.11980435583874,7.21656710126366,2.89826012437692,20.8987475739763,3.60916119402685,2.31492756288305,1.14152491340759,0,0,0,1.40402559083543,1.0404181360211,0,2.18376766658517,0.708875486211932,0.0895585227028483,0.290633938513962,1.15014803749563,0,0,0,0,0,0.190493682876507,0.381988425558278,1.17217447210047,8.55362230113526,1.02827492703324,0.901029173531752,0,1.34557301214433,2.1798003441664,1.83345714552375,15.6418776066911,96.5672403800083,7.607724773004,52.9216852003892,86.3261726364339,3.34369586540785,7.09245660116391,2.93064396917709,11.0093055116774,9.76718889704597,3.29296134712308,6.18898750158097,11.727934308504,3.16780749173372,14.7705294759197,6.97226766880235,25.9929777073348,1.2162378064119,0,0,29.7134820809562,33.309961391893,0,10.7138166934009,10.0683398049688,10.206474904674,0,0,0,0,0,1.30139853857622,1.54657762555539,0.670065061337395,2.55175500661265,0,0,0,3.80343624329334,15.50528615285,11.3931309953889,108.14484799602,72.4421694516477,62.2924539384042,29.8710608231419,3.61135319673263,4.5481500811197,9.31257641632544,21.255219153134,13.4589493035443,13.4669602425528,6.85304051119592,7.20601190002797,0.413536052245775,0,0,0,0,0.30239029332968,12.4053903909388,21.9450621801929,25.8207286878428,9.35415789566617,27.632191449602,50.0255694756619,46.0096005979472,10.3320494847779,19.8869132350702,5.58464660893902,8.30807086693794,22.5448134212321,1.69203229428271,3.60911646545913,0.0920809889358963,10.21848588665,16.2061139525978,28.8473712910733,0.902399225814824,1.5403067420883,5.49044838423799,1.46139224653261,1.16106791782163,1.13733384070897,1.19065593693561,6.0456456508599,7.71136263451447,9.48312531403485,22.0743500496135,0.509752546090077,3.3243040357149,2.0148727924996,0,0,0.769350375349168,5.576248976895,1.95227036798582,2.7821073144885,2.19766715564024,1.32015199872941,1.14853107599234,1.30012049207304,24.1025894766239,6.28359668898793,3.08097234229289,2.76306614507033,3.1702411671442,3.00776685631166,4.20548412351263,2.81247870473133,9.70449188549437,1.15699440752685,1.92190067365106,0,0.50578890427775,18.1289764225941,9.75918275174984,4.1822236209636,1.54016790088044,7.98459045475533,0,15.3819101856254,2.14687330112987,10.7925927114304,25.9431128269355,43.8449446024797,16.3774586439254,5.13526785640705,3.5002357271853,8.6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| |||
|short_description=p@chr20:35177635..35177755,- | |||
}} |
Latest revision as of 13:36, 28 July 2015
Short description: | p@chr20:35177635..35177755, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35177635..35177755, - |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.03e-14 | 76 |
muscle precursor cell | 1.04e-13 | 58 |
myoblast | 1.04e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.04e-13 | 58 |
smooth muscle cell | 2.02e-13 | 43 |
smooth muscle myoblast | 2.02e-13 | 43 |
muscle cell | 7.87e-13 | 55 |
electrically responsive cell | 6.11e-12 | 61 |
electrically active cell | 6.11e-12 | 61 |
mesodermal cell | 3.96e-11 | 121 |
vascular associated smooth muscle cell | 1.04e-09 | 32 |