FFCP PHASE1:Hg19::chr9:119094607..119094618,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:119094607..119094618,+
|short_description=p50@PAPPA
|description=CAGE_peak_50_at_PAPPA_5end
|association_with_transcript=-92bp_to_ENST00000460463_5end
|En...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5069 | |EntrezGene=5069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8602 | |HGNC=8602 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-92bp_to_ENST00000460463_5end | |||
|cluster_id=chr9:119094607..119094618,+ | |||
|coexpression_cluster_id=C776 | |||
|description=CAGE_peak_50_at_PAPPA_5end | |||
|id=chr9:119094607..119094618,+ | |||
|ontology_enrichment_celltype=CL:0000192!1.44e-12!42;CL:0000514!1.44e-12!42;CL:0000187!9.98e-12!54;CL:0000359!2.15e-11!32;CL:0000680!6.84e-11!57;CL:0000056!6.84e-11!57;CL:0000355!6.84e-11!57;CL:0000183!2.21e-10!59;CL:0000393!3.85e-10!60;CL:0000211!3.85e-10!60;CL:0002541!5.05e-10!3;CL:0000055!5.31e-10!180;CL:0002580!1.10e-09!3;CL:0000569!7.17e-07!4;CL:0000011!7.17e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002541;5.59e-45;3!CL:0002591;7.05e-34;1!CL:0002580;2.89e-12;3!CL:0000349;5.25e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.00e-45,3;CL:0002591,7.06e-34,1;CL:0002580,3.24e-12,3;CL:0000349,5.16e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.05e-34;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!4.16e-11!7;UBERON:0000476!5.05e-10!3;UBERON:0000920!5.05e-10!3;UBERON:0001134!6.58e-10!61;UBERON:0002036!6.58e-10!61;UBERON:0003082!6.58e-10!61;UBERON:0002385!1.83e-09!63;UBERON:0001015!1.83e-09!63;UBERON:0000383!1.83e-09!63;UBERON:0004290!3.15e-09!70;UBERON:0004872!3.71e-08!84;UBERON:0000914!4.40e-08!83;UBERON:0002329!4.40e-08!83;UBERON:0003077!4.40e-08!83;UBERON:0003059!4.40e-08!83;UBERON:0007282!4.40e-08!83;UBERON:0009618!4.40e-08!83;UBERON:0007285!4.40e-08!83;UBERON:0005631!1.71e-07!14;UBERON:0000158!1.71e-07!14;UBERON:0000486!2.86e-07!82;UBERON:0000488!4.22e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.59e-45;3!UBERON:0000920;5.59e-45;3!UBERON:0000078;1.07e-17;2!UBERON:0002012;1.07e-17;2!UBERON:0008886;1.07e-17;2!UBERON:0005631;2.57e-14;10!UBERON:0000158;2.57e-14;10!UBERON:0000478;3.55e-13;24!UBERON:0001987;1.57e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.00e-45,3;UBERON:0003124,4.53e-43,7;UBERON:0005631,5.01e-22,14;UBERON:0000158,5.01e-22,14;UBERON:0000078,1.07e-17,2;UBERON:0007497,1.07e-17,2;UBERON:0003643,1.07e-17,2;UBERON:0003504,1.07e-17,2;UBERON:0003469,1.07e-17,2;UBERON:0003496,1.07e-17,2;UBERON:0002012,1.07e-17,2;UBERON:0008886,1.07e-17,2;UBERON:0007303,1.07e-17,2;UBERON:0002061,1.07e-17,2;UBERON:0005432,1.07e-17,2;UBERON:0004363,1.07e-17,2;UBERON:0000478,3.34e-13,24;UBERON:0004145,2.89e-12,3;UBERON:0001987,1.44e-09,4;UBERON:0004340,1.44e-09,4;UBERON:0003498,7.01e-08,5;UBERON:0005985,7.01e-08,5;UBERON:0010188,8.97e-07,6;UBERON:0002539,8.97e-07,6;UBERON:0003351,8.97e-07,6;UBERON:0008816,8.97e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.436882744260345,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,1.12264037773229,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0,0,0,0,0,0,2.20368642781448,0,0.308033580176089,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0.7133421029625,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,0.0915975934018623,4.26427820814908,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33053555243958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.436882744260345,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,1.12264037773229,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0,0,0,0,0,0,2.20368642781448,0,0.308033580176089,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0.7133421029625,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,0.0915975934018623,4.26427820814908,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33053555243958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p50@PAPPA | |||
}} | }} |
Latest revision as of 18:03, 24 September 2015
Short description: | p50@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_50_at_PAPPA_5end |
Coexpression cluster: | C776_chorionic_placenta_Smooth_Aortic_Fibroblast_leiomyoma_mesothelioma |
Association with transcript: | -92bp_to_ENST00000460463_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.00e-45 | 3 |
smooth muscle cell of the pulmonary artery | 7.06e-34 | 1 |
preadipocyte of the breast | 3.24e-12 | 3 |
extraembryonic cell | 5.16e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.00e-45 | 3 |
chorion | 4.53e-43 | 7 |
extraembryonic membrane | 5.01e-22 | 14 |
membranous layer | 5.01e-22 | 14 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.07e-17 | 2 |
developing epithelial placode | 1.07e-17 | 2 |
respiratory system arterial blood vessel | 1.07e-17 | 2 |
respiratory system blood vessel | 1.07e-17 | 2 |
respiratory system artery | 1.07e-17 | 2 |
head blood vessel | 1.07e-17 | 2 |
pulmonary artery | 1.07e-17 | 2 |
pulmonary vascular system | 1.07e-17 | 2 |
pharyngeal vasculature | 1.07e-17 | 2 |
truncus arteriosus | 1.07e-17 | 2 |
aortic sac | 1.07e-17 | 2 |
pharyngeal arch artery | 1.07e-17 | 2 |
extraembryonic structure | 3.34e-13 | 24 |
outflow tract | 2.89e-12 | 3 |
placenta | 1.44e-09 | 4 |
allantois | 1.44e-09 | 4 |
heart blood vessel | 7.01e-08 | 5 |
coronary vessel | 7.01e-08 | 5 |
protuberance | 8.97e-07 | 6 |
pharyngeal arch | 8.97e-07 | 6 |
pharyngeal epithelium | 8.97e-07 | 6 |
embryonic head | 8.97e-07 | 6 |