FFCP PHASE1:Hg19::chr9:120487715..120487720,-: Difference between revisions
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|id=chr9:120487715..120487720,-
|short_description=p@chr9:120487715..120487720,-
|description=CAGE_peak_at_chr9:120487715..120487720,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:120487715..120487720,- | |||
|coexpression_cluster_id=C1333 | |||
|description=CAGE_peak_at_chr9:120487715..120487720,- | |||
|id=chr9:120487715..120487720,- | |||
|ontology_enrichment_celltype=CL:0002057!2.17e-78!42;CL:0000860!9.26e-73!45;CL:0002194!2.39e-49!63;CL:0000576!2.39e-49!63;CL:0000040!2.39e-49!63;CL:0000559!2.39e-49!63;CL:0002009!1.15e-47!65;CL:0000766!4.99e-47!76;CL:0000839!7.04e-44!70;CL:0000557!3.48e-43!71;CL:0000763!9.43e-35!112;CL:0000049!9.43e-35!112;CL:0002087!7.30e-30!119;CL:0000738!1.30e-28!140;CL:0000037!1.92e-25!172;CL:0000566!1.92e-25!172;CL:0000988!1.17e-23!182;CL:0002031!2.82e-22!124;CL:0002032!1.73e-21!165;CL:0000837!1.73e-21!165;CL:0000842!5.17e-15!3;CL:0000224!2.19e-11!4;CL:0000134!2.47e-09!358;CL:0002320!5.16e-09!365;CL:0000219!6.89e-08!390;CL:0000080!9.68e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.82e-20;33!CL:0002057;3.82e-20;33!CL:0000473;3.57e-13;39!CL:0000234;3.57e-13;39!CL:0000771;2.02e-11;2!CL:0000576;2.03e-11;48!CL:0000094;4.66e-11;8!CL:0000766;1.05e-09;69!CL:0000081;2.72e-08;11!CL:0000775;4.84e-08;3!CL:0000226;7.02e-08;3!CL:0000842;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.49e-17,72;CL:0000860,6.95e-17,42;CL:0002057,6.95e-17,42;CL:0000473,8.98e-15,48;CL:0000234,8.98e-15,48;CL:0002194,8.27e-12,59;CL:0000576,8.27e-12,59;CL:0000040,8.27e-12,59;CL:0000559,8.27e-12,59;CL:0000771,1.82e-11,2;CL:0002009,2.00e-11,61;CL:0000738,2.48e-11,136;CL:0000763,2.52e-11,108;CL:0000049,2.52e-11,108;CL:0000094,4.66e-11,8;CL:0000839,1.45e-10,66;CL:0000557,2.07e-10,67;CL:0000037,4.31e-09,168;CL:0000988,1.32e-08,177;CL:0000081,2.72e-08,11;CL:0002087,4.04e-08,115;CL:0000775,5.18e-08,3;CL:0000226,5.93e-08,3;CL:0000842,5.93e-08,3;CL:0002032,1.78e-07,161;CL:0000837,1.78e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.01e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.59e-44!102;UBERON:0003061!1.59e-44!102;UBERON:0002193!5.78e-40!112;UBERON:0002371!1.05e-37!80;UBERON:0001474!1.11e-34!86;UBERON:0004765!1.11e-28!101;UBERON:0001434!1.11e-28!101;UBERON:0002405!1.77e-24!115;UBERON:0003081!1.99e-17!216;UBERON:0002204!5.11e-15!167;UBERON:0000178!3.71e-11!15;UBERON:0000179!3.71e-11!15;UBERON:0000463!3.71e-11!15;UBERON:0002384!2.32e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.95e-12,98;UBERON:0003061,1.95e-12,98;UBERON:0002193,2.92e-11,108;UBERON:0002371,3.52e-09,76;UBERON:0001474,1.66e-08,82;UBERON:0004765,9.58e-08,90;UBERON:0002405,1.71e-07,93;UBERON:0001434,5.83e-07,100 | |||
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|short_description=p@chr9:120487715..120487720,- | |||
}} | }} |
Latest revision as of 22:16, 31 July 2015
Short description: | p@chr9:120487715..120487720, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:120487715..120487720, - |
Coexpression cluster: | C1333_Eosinophils_CD14_Neutrophils_Whole_Basophils_Peripheral_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.49e-17 | 72 |
classical monocyte | 6.95e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.95e-17 | 42 |
defensive cell | 8.98e-15 | 48 |
phagocyte | 8.98e-15 | 48 |
monopoietic cell | 8.27e-12 | 59 |
monocyte | 8.27e-12 | 59 |
monoblast | 8.27e-12 | 59 |
promonocyte | 8.27e-12 | 59 |
eosinophil | 1.82e-11 | 2 |
macrophage dendritic cell progenitor | 2.00e-11 | 61 |
leukocyte | 2.48e-11 | 136 |
myeloid cell | 2.52e-11 | 108 |
common myeloid progenitor | 2.52e-11 | 108 |
granulocyte | 4.66e-11 | 8 |
myeloid lineage restricted progenitor cell | 1.45e-10 | 66 |
granulocyte monocyte progenitor cell | 2.07e-10 | 67 |
hematopoietic stem cell | 4.31e-09 | 168 |
hematopoietic cell | 1.32e-08 | 177 |
blood cell | 2.72e-08 | 11 |
nongranular leukocyte | 4.04e-08 | 115 |
neutrophil | 5.18e-08 | 3 |
single nucleate cell | 5.93e-08 | 3 |
mononuclear cell | 5.93e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.78e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.95e-12 | 98 |
blood island | 1.95e-12 | 98 |
hemolymphoid system | 2.92e-11 | 108 |
bone marrow | 3.52e-09 | 76 |
bone element | 1.66e-08 | 82 |
skeletal element | 9.58e-08 | 90 |
immune system | 1.71e-07 | 93 |
skeletal system | 5.83e-07 | 100 |