FFCP PHASE1:Hg19::chr20:52675557..52675561,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8537 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=974 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-298bp_to_HQ258323,HQ258554_5end | |||
|cluster_id=chr20:52675557..52675561,- | |||
|coexpression_cluster_id=C1218 | |||
|description=CAGE_peak_4_at_BCAS1_5end | |||
|id=chr20:52675557..52675561,- | |||
|ontology_enrichment_celltype=CL:0000542!5.69e-34!53;CL:0000051!5.69e-34!53;CL:0000838!7.18e-33!52;CL:0000945!2.38e-26!24;CL:0000826!2.38e-26!24;CL:0000236!1.95e-14!14;CL:0000738!7.56e-13!140;CL:0002087!9.82e-13!119;CL:0000988!1.01e-11!182;CL:0000037!4.28e-11!172;CL:0000566!4.28e-11!172;CL:0002032!1.82e-09!165;CL:0000837!1.82e-09!165;CL:0002031!6.26e-09!124;CL:0000080!6.81e-09!6;CL:0000084!1.46e-07!25;CL:0000827!1.46e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.41e-23;24!CL:0000236;1.25e-15;13!CL:0000542;1.38e-14;53!CL:0000946;1.05e-07;1!CL:0000786;1.05e-07;1!CL:0000785;2.22e-07;1!CL:0000819;2.22e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.11e-23,24;CL:0000826,5.11e-23,24;CL:0000838,9.86e-23,52;CL:0000542,3.03e-22,53;CL:0000051,3.03e-22,53;CL:0000236,8.68e-20,14;CL:0000785,2.26e-13,2;CL:0000955,2.26e-13,2;CL:0000818,2.26e-13,2;CL:0000954,2.26e-13,2;CL:0000816,2.26e-13,2;CL:0002032,3.01e-09,161;CL:0000837,3.01e-09,161;CL:0000817,3.34e-09,3;CL:0000037,1.05e-08,168;CL:0002087,1.71e-08,115;CL:0000988,4.56e-08,177;CL:0002031,5.10e-08,120;CL:0000946,1.06e-07,1;CL:0000786,1.06e-07,1;CL:0000980,1.06e-07,1;CL:0000819,2.37e-07,1;CL:0000738,9.70e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;1.38e-14;53!CL:0000954;2.12e-13;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.16e-14!10;DOID:162!3.11e-07!235;DOID:14566!7.98e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.85e-21;10!DOID:1036;4.73e-12;8!DOID:2531;3.64e-08;51!DOID:0060083;3.64e-08;51!DOID:630;1.20e-07;1!DOID:0050177;1.20e-07;1!DOID:0050427;1.20e-07;1!DOID:0060073;2.22e-07;1!DOID:8675;2.22e-07;1!DOID:0060060;4.74e-07;1!DOID:0060061;4.74e-07;1!DOID:8691;4.74e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.15e-21,10;DOID:2531,3.47e-12,51;DOID:0060083,3.47e-12,51;DOID:1036,6.05e-12,8;DOID:630,1.20e-07,1;DOID:0050177,1.20e-07,1;DOID:0050427,1.20e-07,1;DOID:0060073,2.37e-07,1;DOID:8675,2.37e-07,1;DOID:0060060,3.21e-07,1;DOID:0060061,3.21e-07,1;DOID:8691,3.21e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.22e-07;1!UBERON:0001961;2.22e-07;1!UBERON:0001744;2.22e-07;1!UBERON:0001042;2.22e-07;1!UBERON:0001735;2.22e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.84e-07,1;UBERON:0001961,2.84e-07,1;UBERON:0001744,2.84e-07,1;UBERON:0001735,2.84e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.492603536699674,0.236132343941038,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0.774672005803016,1.70603078984906,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,1.77901850772711,0.853460445133014,0.400395987036012,1.14950487990897,0.661044872784862,0,2.27685187643779,1.76171156811282,1.14681968437569,0,0.560508562981536,0,0.590129310341499,0.786021525498329,0,0,0,0,0,0.222820913770347,2.94605907474837,0.221533894583621,6.22848886659536,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0.301150238155546,0,1.24930726552346,0,0.821127996921047,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,1.23408681925858,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2498008950307,0.284136146806413,0,0,0,0,0,2.56010021552684,0,0,0,0.276283915531148,0,0,0.738508832766417,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0.874813840149763,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.46112780877612,2.87224462111271,0,0,0,0,0,0,0,1.1279783030859,1.17637520590644,2.3495022176618,6.07211944717392,0,0.210998064528027,0.163232808159148,0,0.649165919226273,0,0,0.611030144933625,0.296521128680622,0.123563938946503,0.522109747527277,0,0,0,2.37191225980366,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0.520679215005393,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,45.7423996446007,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.329663433524666,0.26961417541674,0,0.338693328263138,0,0,0.321506296930038,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,17.538134166849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,1.79988656269437,0,0,0,0,0,0,0.127894371303652,0,1.10086159299127,0,0,0,0.123935764259002,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,2.62216589314576,0,0.523813388962845,0.163771917510097,0,0,0,0,0,0,0,0,1.75871244359621,0,0,0,0,0,0,43.0975113458614,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,5.89392132762208,2.8666168169323,0.111855431797792,0,0,0,0,0,0,0,0,0.118920090777569,0,0.769583617218004,0,0,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,8.9947040332436,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0.26721740526556,0,0,1.36401656792831,1.87574891109325,0,0,0.213233981900981,0,0.516711278688049,0.620747142958579,0,0,0,0.217716747896961,0,2.02056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,14.7461506459487 | |||
|short_description=p4@BCAS1 | |||
}} |
Latest revision as of 02:19, 17 September 2015
Short description: | p4@BCAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BCAS1_5end |
Coexpression cluster: | C1218_hairy_plasma_lymphoma_xeroderma_hereditary_mycosis_splenic |
Association with transcript: | -298bp_to_HQ258323, HQ258554_5end |
EntrezGene: | BCAS1 |
HGNC: | 974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.11e-23 | 24 |
pro-B cell | 5.11e-23 | 24 |
lymphoid lineage restricted progenitor cell | 9.86e-23 | 52 |
lymphocyte | 3.03e-22 | 53 |
common lymphoid progenitor | 3.03e-22 | 53 |
B cell | 8.68e-20 | 14 |
mature B cell | 2.26e-13 | 2 |
pre-B-II cell | 2.26e-13 | 2 |
transitional stage B cell | 2.26e-13 | 2 |
small pre-B-II cell | 2.26e-13 | 2 |
immature B cell | 2.26e-13 | 2 |
hematopoietic oligopotent progenitor cell | 3.01e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.01e-09 | 161 |
precursor B cell | 3.34e-09 | 3 |
hematopoietic stem cell | 1.05e-08 | 168 |
nongranular leukocyte | 1.71e-08 | 115 |
hematopoietic cell | 4.56e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 5.10e-08 | 120 |
antibody secreting cell | 1.06e-07 | 1 |
plasma cell | 1.06e-07 | 1 |
plasmablast | 1.06e-07 | 1 |
B-1 B cell | 2.37e-07 | 1 |
leukocyte | 9.70e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.84e-07 | 1 |
mucosa-associated lymphoid tissue | 2.84e-07 | 1 |
lymphoid tissue | 2.84e-07 | 1 |
tonsillar ring | 2.84e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.15e-21 | 10 |
hematologic cancer | 3.47e-12 | 51 |
immune system cancer | 3.47e-12 | 51 |
chronic leukemia | 6.05e-12 | 8 |
genetic disease | 1.20e-07 | 1 |
monogenic disease | 1.20e-07 | 1 |
xeroderma pigmentosum | 1.20e-07 | 1 |
lymphatic system cancer | 2.37e-07 | 1 |
lymphosarcoma | 2.37e-07 | 1 |
non-Hodgkin lymphoma | 3.21e-07 | 1 |
cutaneous T cell lymphoma | 3.21e-07 | 1 |
mycosis fungoides | 3.21e-07 | 1 |