FFCP PHASE1:Hg19::chr22:37964255..37964268,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:37964255..37964268,+ | |||
|description=CAGE_peak_at_chr22:37964255..37964268,+ | |||
|id=chr22:37964255..37964268,+ | |||
|ontology_enrichment_celltype=CL:0000220!2.64e-13!246;CL:0002321!4.37e-13!248;CL:0000055!4.78e-13!180;CL:0000222!1.23e-09!119;CL:0000066!2.69e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000669;1.35e-12;4!CL:0000317;1.43e-07;2!CL:1000448;1.43e-07;2!CL:0002308;1.43e-07;2!CL:0002140;1.43e-07;2!CL:0002575;1.88e-07;2!CL:1000746;6.09e-07;7!CL:1000612;6.09e-07;7!CL:0000650;8.15e-07;2!CL:1000500;8.15e-07;2!CL:1000618;8.15e-07;2!CL:1001318;8.15e-07;2!CL:0002262;8.15e-07;2!CL:1000398;8.15e-07;2!CL:0002173;8.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,1.84e-12,4;CL:0000317,1.44e-07,2;CL:1000448,1.44e-07,2;CL:0002308,1.44e-07,2;CL:0002140,1.44e-07,2;CL:0002575,1.68e-07,2;CL:0002262,5.62e-07,2;CL:1000398,5.62e-07,2;CL:1000746,8.73e-07,7;CL:1000612,8.73e-07,7;CL:0002554,8.96e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.33e-09!365;UBERON:0000490!1.50e-08!138;UBERON:0005256!2.78e-08!143;UBERON:0000481!9.65e-08!347;UBERON:0000468!1.09e-07!659;UBERON:0000119!2.51e-07!312;UBERON:0002100!3.33e-07!216;UBERON:0003104!4.74e-07!238;UBERON:0009142!4.74e-07!238;UBERON:0000483!5.22e-07!309;UBERON:0000467!9.39e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;1.35e-08;15!UBERON:0002419;1.43e-07;2!UBERON:0007771;1.43e-07;2!UBERON:0003297;1.43e-07;2!UBERON:0001821;1.43e-07;2!UBERON:0003487;1.43e-07;2!UBERON:0001820;1.43e-07;2!UBERON:0000074;6.09e-07;7!UBERON:0001229;6.09e-07;7!UBERON:0001281;8.15e-07;2!UBERON:0003497;8.15e-07;2!UBERON:0003909;8.15e-07;2!UBERON:0003567;8.15e-07;2!UBERON:0003835;8.15e-07;2!UBERON:0003838;8.15e-07;2!UBERON:0003586;8.15e-07;2!UBERON:0005169;8.15e-07;2!UBERON:0002321;8.15e-07;2!UBERON:0005215;8.15e-07;2!UBERON:0002303;8.15e-07;2!UBERON:0002319;8.15e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000353,1.21e-08,15;UBERON:0002419,1.44e-07,2;UBERON:0007771,1.44e-07,2;UBERON:0003297,1.44e-07,2;UBERON:0001821,1.44e-07,2;UBERON:0003487,1.44e-07,2;UBERON:0001820,1.44e-07,2;UBERON:0005089,1.44e-07,2;UBERON:0005088,1.44e-07,2;UBERON:0001281,5.62e-07,2;UBERON:0003497,5.62e-07,2;UBERON:0003909,5.62e-07,2;UBERON:0003835,5.62e-07,2;UBERON:0005406,8.46e-07,2;UBERON:0010532,8.73e-07,7;UBERON:0000074,8.73e-07,7;UBERON:0001229,8.73e-07,7;UBERON:0001230,8.73e-07,7;UBERON:0003220,8.73e-07,7;UBERON:0005749,8.73e-07,7;UBERON:0004199,8.73e-07,7;UBERON:0004209,8.73e-07,7;UBERON:0004198,8.73e-07,7 | |||
|phase1_expression=0.908391896352783,1.71280419112787,1.12763523276777,0,1.34088328328186,1.74467704820074,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.61560529038394,0.612002073732759,0.626909442956176,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,1.0843174571537,1.00267582127178,0.289693037921647,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,1.09288586487763,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,1.13061588384802,0.419499436209906,1.10047216776027,0.208994966536811,0,0,0.33472061276467,2.01414658554573,0,0.976248230192678,0.735326160691737,1.62028389576352,0.535798369704479,0,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0,0.759783069987479,0.132409180813219,0.286836620748814,0.709336764396714,0.560677600142307,0,0.98667019366864,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0.937285727335186,0.936480230490962,0,0.597794722207204,0.23486899728753,0,0.140450806702248,0.408308342509787,0.122834317311768,0.516628905878827,0,1.23633464639278,1.82032272387605,1.43723628363248,0,0,0,1.31693286264251,0,0.300476117813194,0,0,0.427114777637135,0.211931901159562,0.300091096084402,0.309157587715317,0,0.744467425326359,0.337552664482532,0.974370051611986,0,0.276149695926898,0.80823028409406,0,0.503760491138201,0.339121184620975,0,0.545492241181669,0.286804595389004,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0.643240938192885,0,1.85747171212792,0,0.591534000199219,0.842923450390509,0.241011029883482,0.55146986366197,0.653638332277218,0.474541238222193,0.269662616320329,0.196221465125346,0.769494313892781,1.4763109092493,2.80483547606892,0.4115740113314,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,2.30475599358114,0,0.301586917234893,0.370353780634118,0.651616610620649,0,1.44331342025273,0.115930404975077,0.234817388471643,0.288732895522148,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.567100388969546,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0.063497894292169,1.14596527667483,0,0,0.514137463516618,0,1.42913216315289,0.560655421726804,0.43596006883328,0.07333828582095,0.258543431515556,10.7296933755565,0,2.12750493267896,3.12022310734098,0.257207374262142,0,0,0.714889968290738,0,0,0,0,0,0.602878754119172,0,2.89921674427965,0,0,0,2.39624855491583,3.44585807502342,0,0.144781306667579,0.205476322550383,0.716243852959582,0,0,0,0,1.01637849688985,0,1.54657762555539,0,1.27587750330633,0,0,0,0.49076596687656,0.500170521059677,0,0.831883446123229,0.535286966391485,0.788512075169673,0,0.601892199455438,13.6444502433591,2.0694614258501,0.664225598535437,0.184369168541703,0.781952530212746,3.91602314925481,3.77457766191941,0,0,0,0.606255142892519,0,0.907170879989041,0.744323423456331,0.153461973288062,1.40330047216537,0.768834895534206,0.511707249066704,0.321707842287215,1.48418066444991,0.154209693802656,0.887808626565635,0.574890092096664,0.519254429183621,0.697262270759755,0.725156697549733,0.802025881213139,0.920809889358963,0.229628896329213,0.728364672026868,0.917870904715969,1.80479845162965,0.231046011313244,0.784349769176855,0,0.527758144464379,1.13733384070897,0.510281115829547,0,7.71136263451447,1.08378575017541,2.50844886927427,0,0.831076008928724,0.671624264166535,0,0,0.512900250232778,1.64007322849853,3.25378394664303,0.206082023295445,0.366277859273374,0.247528499761764,5.74265537996172,5.20048196829217,1.6068392984416,2.32009723901093,0.154048617114644,0.460511024178389,0.137836572484531,0.429680979473094,0.145016693914229,0.0852266274161009,1.95870478422822,0.991709492165869,0.768760269460425,0,0.809262246844399,1.85938219718914,0,0.6970372701606,0.616067160352178,0.532306030317022,0.869932992075073,0.9266210955196,0.143124886741991,0,0,0.190630193923825,1.02359116524534,0,0.95460974377781,0,0.179872457583315,0.274537029736055,0.471249609382746,1.01091240786658,0,0.421258456238981,0.975267478179181,0.243713489631284,1.05650146756755,0.682499557039929,1.27264888758341,0,0.551365343546124,0.66343897524122,0.438450885253763,0.578775534266688,0,0,0.6196469961995,0.845086807596724,0.573645408816206,0,0,0.354761064070598,0.422215270595328,0.329294892959902,0,2.0996083214699,0.577332676353072,0.670302275535787,2.17781969722645,0.470719003883896,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.593929361665277,0.307160702099232,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0.306806047506464,0,0.311039587661807,0.449341755736634,0.179021174675609,0,0.295930216910801,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0.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| |||
|short_description=p@chr22:37964255..37964268,+ | |||
}} |
Latest revision as of 21:00, 28 July 2015
Short description: | p@chr22:37964255..37964268, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:37964255..37964268, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 1.84e-12 | 4 |
sebum secreting cell | 1.44e-07 | 2 |
epithelial cell of sweat gland | 1.44e-07 | 2 |
epithelial cell of skin gland | 1.44e-07 | 2 |
acinar cell of sebaceous gland | 1.44e-07 | 2 |
central nervous system pericyte | 1.68e-07 | 2 |
endothelial cell of sinusoid | 5.62e-07 | 2 |
endothelial cell of hepatic sinusoid | 5.62e-07 | 2 |
glomerular cell | 8.73e-07 | 7 |
kidney corpuscule cell | 8.73e-07 | 7 |
fibroblast of lymphatic vessel | 8.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
parenchyma | 1.21e-08 | 15 |
skin gland | 1.44e-07 | 2 |
epidermis gland | 1.44e-07 | 2 |
gland of integumental system | 1.44e-07 | 2 |
sebaceous gland | 1.44e-07 | 2 |
skin sebaceous gland | 1.44e-07 | 2 |
sweat gland | 1.44e-07 | 2 |
sweat gland placode | 1.44e-07 | 2 |
sebaceous gland placode | 1.44e-07 | 2 |
hepatic sinusoid | 5.62e-07 | 2 |
abdomen blood vessel | 5.62e-07 | 2 |
sinusoid | 5.62e-07 | 2 |
abdominal segment blood vessel | 5.62e-07 | 2 |
perirenal fat | 8.46e-07 | 2 |
primitive nephron | 8.73e-07 | 7 |
renal glomerulus | 8.73e-07 | 7 |
renal corpuscle | 8.73e-07 | 7 |
glomerular capsule | 8.73e-07 | 7 |
metanephric mesenchyme | 8.73e-07 | 7 |
glomerular tuft | 8.73e-07 | 7 |
S-shaped body | 8.73e-07 | 7 |
renal vesicle | 8.73e-07 | 7 |
comma-shaped body | 8.73e-07 | 7 |