FFCP PHASE1:Hg19::chr22:40440895..40440904,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23112 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29190 | |||
|TSSclassifier=strong | |||
|UniProt=B0QYM5,Q9UPQ9 | |||
|association_with_transcript=74bp_to_ENST00000301923,ENST00000441751,NM_001024843,uc003aym.2_5end | |||
|cluster_id=chr22:40440895..40440904,+ | |||
|coexpression_cluster_id=C1134 | |||
|description=CAGE_peak_12_at_TNRC6B_5end | |||
|id=chr22:40440895..40440904,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.61e-25!140;CL:0000037!1.15e-22!172;CL:0000566!1.15e-22!172;CL:0000988!2.19e-22!182;CL:0002032!5.37e-18!165;CL:0000837!5.37e-18!165;CL:0002031!4.57e-15!124;CL:0002087!8.46e-15!119;CL:0000542!2.71e-12!53;CL:0000051!2.71e-12!53;CL:0000838!9.49e-12!52;CL:0000791!8.73e-09!18;CL:0000789!8.73e-09!18;CL:0002420!8.73e-09!18;CL:0002419!8.73e-09!18;CL:0000790!8.73e-09!18;CL:0000094!1.78e-08!8;CL:0000624!3.22e-08!6;CL:0000766!1.04e-07!76;CL:0000763!1.52e-07!112;CL:0000049!1.52e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000775;4.34e-23;3!CL:0000623;1.41e-22;3!CL:0000236;3.30e-19;13!CL:0000094;3.67e-15;8!CL:0000542;2.02e-14;53!CL:0000081;4.56e-11;11!CL:0000625;6.38e-11;11!CL:0000784;2.87e-10;3!CL:0000945;3.46e-10;24!CL:0000791;5.74e-10;18!CL:0000789;5.74e-10;18!CL:0002419;5.74e-10;18!CL:0000084;4.11e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.72e-24,52;CL:0000542,5.60e-24,53;CL:0000051,5.60e-24,53;CL:0000775,5.23e-23,3;CL:0000623,1.36e-22,3;CL:0000825,1.36e-22,3;CL:0000738,1.97e-21,136;CL:0000236,7.43e-18,14;CL:0000037,1.33e-16,168;CL:0000988,1.48e-15,177;CL:0000094,3.95e-15,8;CL:0002087,8.57e-13,115;CL:0002032,1.68e-12,161;CL:0000837,1.68e-12,161;CL:0000081,4.81e-11,11;CL:0000625,6.72e-11,11;CL:0002031,1.70e-10,120;CL:0000945,3.24e-10,24;CL:0000826,3.24e-10,24;CL:0000784,4.19e-10,3;CL:0000791,5.48e-10,18;CL:0000789,5.48e-10,18;CL:0002420,5.48e-10,18;CL:0002419,5.48e-10,18;CL:0000790,5.48e-10,18;CL:0000084,3.97e-07,25;CL:0000827,3.97e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;2.02e-14;53!CL:0000790;5.74e-10;18!UBERON:0001045;2.55e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.67e-07!102;UBERON:0003061!1.67e-07!102;UBERON:0007023!4.50e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.55e-08;1!UBERON:0001153;2.55e-08;1!UBERON:0009854;2.55e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.98e-08,1;UBERON:0001153,1.98e-08,1;UBERON:0001045,1.98e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.309632246632152,0,0,0,0.232401601740905,0,0.293600439334847,0,0.802177789880567,0.651032612147555,0,0,0.77272670290256,0,0,0.727752183563449,0.232429036905685,0,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0.598390972864896,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,1.26584954976354,0,0,0,0,0.300353785683013,0,0,0.39783335439818,0.182664153764634,0,0,0.889509253863555,1.70692089026603,0.800791974072025,1.14950487990897,1.32208974556972,0,4.55370375287559,1.17447437874188,2.29363936875137,0,2.80254281490768,0,0.786839080455332,1.57204305099666,0.411202997999018,0,0.651844533267181,0,1.94826728407911,0,0.589211814949674,0.221533894583621,0.270803863765016,0,0,0.164437904603676,0.276350017785848,0,0.593146252648242,0.267540828089713,0,0.113309342697566,0.766440987203842,0.34362744548263,0,0,0,0,0.301150238155546,0.383959833463255,1.24930726552346,0,0,4.43534835094411,4.01160293675261,4.19990771260117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0.953962497221368,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.352193736052904,0.621984346622316,0,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,3.66566877261179,2.31017465303547,0,0,0,0,0,5.24304916763028,5.9832291840805,2.07207756718018,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0.343143423810856,2.48121631347465,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,1.29694662238543,0,0,0.106824071127473,0,0,0.185803175125719,0,0.284567373393656,0,0,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0.144090417154106,0,0.514784993585894,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0.160753148465019,0,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0.157204305099666,0.414239055347196,0,0.197611631897944,0.365377795142688,0.638341257770182,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.124192805882767,0,0.249960815924213,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.23658523500376,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.339848664884159,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.51215543128185,0.691259661814092,0,0,0.0852134047591577,0.423387050190929,0,0,0,0.111855431797792,0.098150233615243,0,0.647428837187895,0.307988420568741,0,0,0.233939463462106,0,0,0.11294608203896,0,0.301925687133347,0.0771741581079447,0,0,0,0.235676547101626,0,0.297046400327086,0,0,0.187967835959707,0.193373663920732,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0.378893491091197,0.535928260312357,0,0,0.213233981900981,0,0.452122368852043,0.496597714366863,0.224263725161227,0.190941474834495,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p12@TNRC6B | |||
}} |
Latest revision as of 19:43, 24 September 2015
Short description: | p12@TNRC6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TNRC6B_5end |
Coexpression cluster: | C1134_Eosinophils_Neutrophils_CD19_CD8_Natural_CD4_Basophils |
Association with transcript: | 74bp_to_ENST00000301923, ENST00000441751, NM_001024843, uc003aym.2_5end |
EntrezGene: | TNRC6B |
HGNC: | 29190 |
UniProt: | B0QYM5Q9UPQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.72e-24 | 52 |
lymphocyte | 5.60e-24 | 53 |
common lymphoid progenitor | 5.60e-24 | 53 |
neutrophil | 5.23e-23 | 3 |
natural killer cell | 1.36e-22 | 3 |
pro-NK cell | 1.36e-22 | 3 |
leukocyte | 1.97e-21 | 136 |
B cell | 7.43e-18 | 14 |
hematopoietic stem cell | 1.33e-16 | 168 |
hematopoietic cell | 1.48e-15 | 177 |
granulocyte | 3.95e-15 | 8 |
nongranular leukocyte | 8.57e-13 | 115 |
hematopoietic oligopotent progenitor cell | 1.68e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-12 | 161 |
blood cell | 4.81e-11 | 11 |
CD8-positive, alpha-beta T cell | 6.72e-11 | 11 |
hematopoietic lineage restricted progenitor cell | 1.70e-10 | 120 |
lymphocyte of B lineage | 3.24e-10 | 24 |
pro-B cell | 3.24e-10 | 24 |
plasmacytoid dendritic cell | 4.19e-10 | 3 |
mature alpha-beta T cell | 5.48e-10 | 18 |
alpha-beta T cell | 5.48e-10 | 18 |
immature T cell | 5.48e-10 | 18 |
mature T cell | 5.48e-10 | 18 |
immature alpha-beta T cell | 5.48e-10 | 18 |
T cell | 3.97e-07 | 25 |
pro-T cell | 3.97e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.98e-08 | 1 |
caecum | 1.98e-08 | 1 |
midgut | 1.98e-08 | 1 |