FFCP PHASE1:Hg19::chr22:51001332..51001369,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=644186 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35245 | |||
|TSSclassifier=strong | |||
|UniProt=A1L190 | |||
|association_with_transcript=0bp_to_ENST00000406915_5end | |||
|cluster_id=chr22:51001332..51001369,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_SYCE3_5end | |||
|id=chr22:51001332..51001369,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000083;1.81e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,3.32e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1793;1.81e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1793,3.32e-08,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;4.66e-09;4!UBERON:0001905;2.18e-08;2!UBERON:0002757;2.18e-08;2!UBERON:0010134;2.18e-08;2!UBERON:0005408;2.18e-08;2!UBERON:0001899;2.18e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,7.45e-09,4;UBERON:0001905,4.47e-08,2;UBERON:0002757,4.47e-08,2;UBERON:0010134,4.47e-08,2;UBERON:0005408,4.47e-08,2;UBERON:0001899,4.47e-08,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,1.30592814099919,0.245733936501509,0.697801167972428,0.873765488520689,0.263766978228454,0,0.331397375727916,0,0.602694528023977,0,0,0.369363174230364,0,1.56727360739044,0,0.136874425072884,0.125542639594803,0.305653622991805,0.164201178899891,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0,0,1.56386155736164,0,0,0,0,0.223915474239924,0,0.515151135268373,0.436194716338694,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0.575384784644301,0.512321413058201,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0,0,0,0,0,0.329851300186716,0.199463657621632,0.852449501065388,0.290209238628584,0.56738522469114,0.622822248995575,0.502497330513487,1.5644487552606,0.65156653411535,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.561643155732475,0.150176892841506,0.32145117339416,0.570025487482497,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.390178042679635,0,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.724232594804119,0,0,0.189069634328136,0,0.087834785693126,16.8308112014561,0.364295288292542,0.741568885568859,0.649094787309367,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0.496971951695318,0,0,0,0,0.560677600142307,0,0,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0.423863802319124,0,0.206105058476878,0.257640540045629,0,0,0.0974370051611986,0,0.184099797284599,0,0,0,0,0,0.545492241181669,0,0.243947412259191,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0.737930631258681,0,0.329250856225877,0,0.201057944823262,0.555530670951178,0,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0.716468181622786,0.290633938513962,0.383382679165211,0,0.264145302039678,0,0,0.12624243342638,0.317489471460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0.355391948742546,0,1.20575750823834,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0.112085143993527,0,0,0.128343036279748,0.508189248444927,0,0,0.335032530668698,0.637938751653163,1.49801404789436,2.99161459204025,0,0.36807447515742,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0,0.587403472388222,1.37257369524342,0,0.431428401637234,0.106727557803444,0,0,0.604780586659361,0,0,0.280660094433074,0,0,0.482561763430822,0,0,0,0,0,0.116210378459959,0,0.40101294060657,0.460404944679482,0,0,0,0.451199612907412,0.462092022626489,0,0,0.316654886678627,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0.447749509444357,0,0,0,0.328014645699706,0.650756789328606,0.206082023295445,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0.178064071293475,0.330569830721956,0.192190067365106,0.127612712494584,0.2023155617111,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0.886860307073351,0.459446800413919,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.142283686696828,0.318852545457645,0,0,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0.33307196799782,0,0,0.146508179271894,9.34476017471254,0.557216921387392,0,0.71623345421307,0.593929361665277,0,0.994147647766298,0.140669416410513,0.333926115068718,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0.20453736500431,2.09244169283818,0.933118762985422,0.0898683511473268,0,1.53471711068062,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,1.82299432759663,0.787139999965761,0.724999575434793,0,0.508507300585533,1.65471377237555,0.344743373241465,1.45802306691627,1.04174996959975,0,0.60298219312704,0,0,0.295547618953547,0.87754158861589,0.435753854075961,0,0.0769502585037971,0,0.23056390438806,0.0897576444097721,0.651884231532048,0,0.0915975934018623,1.5991043280559,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0,0,0,2.10998064528027,0.652931232636591,0.424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| |||
|short_description=p1@SYCE3 | |||
}} |
Latest revision as of 21:31, 15 September 2015
Short description: | p1@SYCE3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYCE3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000406915_5end |
EntrezGene: | SYCE3 |
HGNC: | 35245 |
UniProt: | A1L190 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 3.32e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 7.45e-09 | 4 |
pineal body | 4.47e-08 | 2 |
regional part of epithalamus | 4.47e-08 | 2 |
secretory circumventricular organ | 4.47e-08 | 2 |
circumventricular organ | 4.47e-08 | 2 |
epithalamus | 4.47e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreatic cancer | 3.32e-08 | 4 |