FFCP PHASE1:Hg19::chr2:192711954..192711965,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8436 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10690 | |||
|TSSclassifier=strong | |||
|UniProt=O95810 | |||
|association_with_transcript=15bp_to_ENST00000304141,uc002utb.2_5end | |||
|cluster_id=chr2:192711954..192711965,- | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_2_at_SDPR_5end | |||
|id=chr2:192711954..192711965,- | |||
|ontology_enrichment_celltype=CL:0002139!6.91e-12!24;CL:0000213!8.43e-11!57;CL:0000215!8.43e-11!57;CL:0000115!1.20e-09!35;CL:0000222!1.32e-08!119;CL:0002078!1.62e-08!44;CL:0000071!2.40e-08!18;CL:0002546!2.40e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.86e-17;24!CL:0000115;1.27e-14;36!CL:0000071;1.61e-12;18!CL:0000213;7.74e-10;58!CL:0000215;7.74e-10;58!CL:0002078;5.49e-09;45!CL:0000097;1.52e-08;5!CL:1000413;1.85e-07;9!CL:0000163;3.35e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.79e-17,24;CL:0000115,1.21e-16,36;CL:0000213,2.31e-15,58;CL:0000215,2.31e-15,58;CL:0002078,8.19e-14,45;CL:0000071,1.16e-12,18;CL:0002546,1.16e-12,18;CL:0000097,1.57e-08,5;CL:0002028,1.57e-08,5;CL:1000413,1.24e-07,9;CL:0000163,3.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.61e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!1.74e-15!113;UBERON:0007023!1.74e-14!115;UBERON:0004535!2.42e-14!110;UBERON:0004111!1.23e-09!241;UBERON:0004872!1.66e-09!84;UBERON:0002049!1.67e-09!79;UBERON:0007798!1.67e-09!79;UBERON:0000477!2.02e-09!286;UBERON:0003914!1.03e-08!118;UBERON:0001986!2.40e-08!18;UBERON:0004638!2.40e-08!18;UBERON:0004852!2.40e-08!18;UBERON:0000025!2.72e-08!194;UBERON:0000119!3.45e-08!312;UBERON:0000055!4.38e-08!69;UBERON:0000483!1.14e-07!309;UBERON:0000487!2.99e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.61e-12;18!UBERON:0001986;1.61e-12;18!UBERON:0004852;1.61e-12;18!UBERON:0000487;9.37e-11;22!UBERON:0006914;6.50e-09;25!UBERON:0003915;1.85e-07;9!UBERON:0004700;1.85e-07;9!UBERON:0001917;1.85e-07;9!UBERON:0000490;6.43e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,6.99e-15,112;UBERON:0004535,7.24e-14,109;UBERON:0004638,1.16e-12,18;UBERON:0001986,1.16e-12,18;UBERON:0004852,1.16e-12,18;UBERON:0003914,5.48e-11,117;UBERON:0000487,6.11e-11,22;UBERON:0004872,5.02e-10,83;UBERON:0007023,1.94e-09,114;UBERON:0000055,3.27e-09,68;UBERON:0006914,4.52e-09,25;UBERON:0002049,3.46e-08,78;UBERON:0007798,3.46e-08,78;UBERON:0003915,1.24e-07,9;UBERON:0004700,1.24e-07,9;UBERON:0001917,1.24e-07,9;UBERON:0004111,3.53e-07,240;UBERON:0007500,4.01e-07,59;UBERON:0001981,4.01e-07,59;UBERON:0004537,4.01e-07,59;UBERON:0006965,4.01e-07,59 | |||
|phase1_expression=0.181678379270557,2.35510576280081,1.83240725324762,0,1.78784437770915,5.23403114460221,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,0,0.767658796194425,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,4.73091478821062,0.722878304769133,0,0.144846518960824,0,0,0.472674085820339,0.443458794925128,0.263504357079378,0.982343066232845,0,0,0,0,0,0,0,0,2.78267370313387,3.4409383804245,1.73570250803797,5.6530794192401,1.25849830862972,1.37559020970034,1.8809546988313,5.68516870172524,5.69226020298736,6.35969164252873,3.22263453687318,0,2.4406205754817,2.20597848207521,0.81014194788176,4.10778750106767,2.46982309888787,3.37834441449967,0,2.84779697870439,2.19842092716489,0,3.87780264148325,0,0,1.13967460498122,0.662045904066094,0.286836620748814,1.06400514659507,6.16745360156538,0,0,2.17847724779836,0.269421344139376,0.980771418680752,0.454072282934794,1.72852777344,0,0.936480230490962,0.570471821544449,0,0.23486899728753,0.485618833104395,0.280901613404497,0,0.122834317311768,0.309977343527296,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,2.38207584636044,0.538168907066586,0.427114777637135,0,0.300091096084402,0,1.8034837803194,1.30281799432113,0.337552664482532,0,0.252433774244115,0.184099797284599,0.646584227275248,0,0.302256294682921,0.169560592310488,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,2.80483547606892,2.057870056657,0,0,0,1.18157981336281,0,0,1.20097467208968,0.109750285408626,0,0,0,0,1.03993478527958,1.44331342025273,0.463721619900307,0.352226082707465,2.30986316417718,0.925971025153221,3.23432058798817,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,151.247614034055,20.4272366910684,80.2359807142788,98.7221680906186,49.1083066028618,0,0,0,0,0,0,0,0.897048674762886,0.43596006883328,1.9067954313447,0,0,0,0,0,0,0,0,1.71573592389777,0,0.823240336780769,0,1.42156779497018,0.791951872933429,2.71295439353627,2.61460037580088,6.49824442683371,0,0,0,0.479249710983165,0,2.85273810081437,0.144781306667579,0.410952645100767,1.43248770591916,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0.36807447515742,0.500170521059677,0,1.45579603071565,0.356857977594324,0,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.783204629850962,1.37257369524342,0,0.431428401637234,0.106727557803444,0,0,0,0.744323423456331,0.153461973288062,0,1.53766979106841,0.511707249066704,0.804269605718038,1.48418066444991,0.154209693802656,0,0.246381468041427,0.519254429183621,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,1.13733384070897,1.19065593693561,1.0795795805107,1.54227252690289,0.812839312631559,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,2.16386124460217,0,0,0,0,1.6068392984416,0.290012154876366,0,0.614014698904518,0.551346289938122,0.429680979473094,0,0.340906509664404,0.267096106940212,0,0,0,0.10115778085555,0,0,0,0.616067160352178,0.532306030317022,0,0,0,0.744316738719335,0.632758849437452,0.762520775695299,0,0.42793898803392,0.318203247925937,0,0.539617372749944,0.274537029736055,0.471249609382746,0,0,0.842516912477962,0.48763373908959,0.487426979262569,0,0,0.141405431953713,0,0,1.32687795048244,0.438450885253763,0,0.655894752046633,0.608731130888112,0,0,0,0,0,0,0,0.658589785919804,0,0,0.0962221127255121,0,0,1.50630081242847,0,0,0,0,0,6.88173486428138,6.83576624608995,1.42939065274673,2.46817363851717,3.8908398671563,1.62009431171434,4.75875105776562,0.427296284509893,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0.423347165447766,0,0,0,0,5.01268954180134,0.169291777801603,0,0,0,0,0,0,0,0,4.17609260842864,1.23087398947712,0.811367035427949,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0.844501632511974,1.39473591775749,0.552567831062295,0,0,0,0.311039587661807,0,0,0,2.17015492401254,11.974154617347,0,0,0.185536196323703,0,0,0,2.17499872630438,0.227586896570999,0.254253650292766,0,0,0,0,0,0,1.52581736317083,0,0,1.31631238292384,0,0,1.30815439456455,0,0,0,0,0,0.0915975934018623,0,0,1.09886179476517,0.664846727600626,2.48155226678899,1.76456280885966,1.1747511088309,0.37950746544837,1.43042921082341,0.210998064528027,1.95879369790977,0,0,1.99052386215701,1.50377859655677,3.05515072466813,0,0,0,0.202203398942031,3.21031058919516,1.1713222286267,0,0.19566461893209,0.971121518136371,0,1.20990716048664,0.91821828489147,0.442306057399416,0,0,1.32930774541437,0,0.627865836814451,1.19472429772959,1.70765727617876,0.416024019039416,0,0,0,2.09672001890436,0,0,0,0,1.84279131327997,0.0882561266915003,0.90392296312213,0,0,0.253243183823515,0,0.160317640503067,7.04394882639863,0,0,0.114536596165916,0.343189995723929,0.288109595976299,0,0,8.56196498263768,8.36822770498666,0,0,0.600420288709789,0.273810757783986,0,1.28929632425987,0,4.74780082162832,3.20824593616357,6.46085722119133,0.599037001496973,2.14613024068285,6.02562935093056,1.94832070211506,1.08089965062721,0,1.3393140992228,1.40106959247983,1.28066733322951,2.75596948241297,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.709251365692784,0.786818822024972,3.16801009558219,5.1993328406525,0,6.4322579373603,3.97255182219259,0,0.542999601753713,0.864221491201268,0.979762080328227,0,0.164185041498678,0.170388021785422,0,1.46552233678082,0,0.258565912723101,0.39669780522807,1.19760786519031,0,3.9511342650047,1.25763444079733,2.89967338743037,0.992332043623902,0,0,0.638341257770182,6.52821364043369,17.2976026875663,10.7220951867212,4.26234419922746,2.98402782875445,0,0.122026264901963,0.250381861413,0,0.332787154610557,0.248385611765534,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,1.36107831386915,0.310874401165561,0.295710299979268,0.477890301491107,0.449803112163605,0.310525913752519,1.24411862352257,0.53168342911599,0,0.751288044986092,2.66563648518157,1.22061219961398,0.545545977607678,0.214821114084977,1.39210127963548,0.398095888698616,16.8011661158525,0,0,3.78554694685953,1.54095864325843,0,0,0.453411851024545,0.926089897295336,1.95789363605174,0.179088841081487,0,1.53498834705095,5.83074181621407,0.578742114812744,0.168942440653073,0,0,0.911579868532147,0,0,0,0,0,0.245772908753719,0,0,0,0,5.10764358210152,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,2.4499638188256,0.128458450192919,0,0.159633859057151,0.615349092722265,0.756215088665154,0,0.322951291263702,0,0,0,0.366857197043358,0,0,0,0,2.18109952212846,0,0,0,5.2407013603231,0,0.270150338473579,0,0,0.126831620387814,0,1.09651553371436,2.97726707033577,0.527613733078862,0.255524855279191,0,0,1.21393120847326,0.455324382702595,0.887023701626388,0,0.171488009437418,0.475788130837822,0.0657727735628491,0.945550727071746,0,2.43328587836593,0.157115589916002,0,1.82631744101899,0.215927591218621,0,1.1436247068265,0.158013611732727,0,0,0.801711364730253,0,0.17071847709395,0,0.430227358820278,0,0,0.846774100381858,0,0,0.955538938977433,0,0.098150233615243,0,0.647428837187895,1.53994210284371,2.3196288626764,1.94284397223656,0,0,0,2.93659813301296,0,0.150962843566674,0.231522474323834,1.5299169235277,0,2.45148321753905,0,0.196308467114945,0,2.5359343655004,0,2.44358186747619,3.0939786227317,0,0.178553938605658,0,0,0.730336388246517,0.917458566809082,0.430018749454354,0,0.135982980381829,2.61810414204226,2.645134202577,0,0,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0.606229585745915,0,0,0.103432995861895,1.91910583710883,1.90451545170992,0.0645889098360061,0.186224142887574,1.34558235096736,1.84576759006678,1.61693751166575,3.48346796635138,5.81796611844978,0.134704106029175,0.78894425931944,1.99596213927608,0,0.853818767021724,0,1.07790242527904,0,1.1001729976458,0.406896178315738,1.33151354837103,3.22038069745642,0 | |||
|short_description=p2@SDPR | |||
}} |
Latest revision as of 05:21, 19 September 2015
Short description: | p2@SDPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SDPR_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 15bp_to_ENST00000304141, uc002utb.2_5end |
EntrezGene: | SDPR |
HGNC: | 10690 |
UniProt: | O95810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.79e-17 | 24 |
endothelial cell | 1.21e-16 | 36 |
lining cell | 2.31e-15 | 58 |
barrier cell | 2.31e-15 | 58 |
meso-epithelial cell | 8.19e-14 | 45 |
blood vessel endothelial cell | 1.16e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.16e-12 | 18 |
mast cell | 1.57e-08 | 5 |
basophil mast progenitor cell | 1.57e-08 | 5 |
endothelial cell of artery | 1.24e-07 | 9 |
endocrine cell | 3.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 6.99e-15 | 112 |
cardiovascular system | 7.24e-14 | 109 |
blood vessel endothelium | 1.16e-12 | 18 |
endothelium | 1.16e-12 | 18 |
cardiovascular system endothelium | 1.16e-12 | 18 |
epithelial tube | 5.48e-11 | 117 |
simple squamous epithelium | 6.11e-11 | 22 |
splanchnic layer of lateral plate mesoderm | 5.02e-10 | 83 |
adult organism | 1.94e-09 | 114 |
vessel | 3.27e-09 | 68 |
squamous epithelium | 4.52e-09 | 25 |
vasculature | 3.46e-08 | 78 |
vascular system | 3.46e-08 | 78 |
endothelial tube | 1.24e-07 | 9 |
arterial system endothelium | 1.24e-07 | 9 |
endothelium of artery | 1.24e-07 | 9 |
anatomical conduit | 3.53e-07 | 240 |
epithelial tube open at both ends | 4.01e-07 | 59 |
blood vessel | 4.01e-07 | 59 |
blood vasculature | 4.01e-07 | 59 |
vascular cord | 4.01e-07 | 59 |