FFCP PHASE1:Mm9::chr10:79792872..79792956,+: Difference between revisions
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{{FFCP|EntrezGene=70335|HGNC=|MCL_coexpression_id=175|UniProt=D3Z6V2,Q9JM62|association_with_transcript=0bp_to_ENSMUST00000040081,ENSMUST00000153167,NM_001204931,NM_139292,uc007gct.1,uc007gcu.1_5end|description=CAGE_peak_1_at_Reep6_5end|id=chr10:79792872..79792956,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.33e-16!59;UBERON:0000160!1.12e-15!43;UBERON:0004119!4.76e-13!130;UBERON:0000925!4.76e-13!130;UBERON:0006595!4.76e-13!130;UBERON:0001007!1.14e-12!128;UBERON:0001555!1.14e-12!128;UBERON:0007026!1.14e-12!128;UBERON:0009854!3.02e-12!23;UBERON:0009856!3.02e-12!23;UBERON:0000466!4.57e-12!79;UBERON:0002365!5.18e-12!25;UBERON:0002330!5.18e-12!25;UBERON:0002107!6.03e-12!22;UBERON:0007499!6.03e-12!22;UBERON:0006925!6.03e-12!22;UBERON:0009497!6.03e-12!22;UBERON:0000015!6.03e-12!22;UBERON:0002423!6.03e-12!22;UBERON:0006235!6.03e-12!22;UBERON:0008835!6.03e-12!22;UBERON:0003894!6.03e-12!22;UBERON:0004161!6.03e-12!22;UBERON:0008836!6.03e-12!22;UBERON:0004921!7.58e-12!126;UBERON:0004185!7.58e-12!126;UBERON:0005177!3.83e-09!85;UBERON:0005172!2.12e-08!49;UBERON:0005173!2.12e-08!49;UBERON:0002417!2.12e-08!49;UBERON:0000916!2.12e-08!49;UBERON:0009569!3.18e-08!66;UBERON:0000344!1.02e-07!15;UBERON:0004923!3.45e-07!24;UBERON:0001242!8.39e-07!13;UBERON:0000060!8.39e-07!13;UBERON:0001262!8.39e-07!13;UBERON:0004786!8.39e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.56e-14,31;UBERON:0005409,4.68e-14,47;UBERON:0009854,2.75e-12,23;UBERON:0009856,2.75e-12,23;UBERON:0002365,4.72e-12,25;UBERON:0002330,4.72e-12,25;UBERON:0002107,5.51e-12,22;UBERON:0007499,5.51e-12,22;UBERON:0006925,5.51e-12,22;UBERON:0009497,5.51e-12,22;UBERON:0000015,5.51e-12,22;UBERON:0002423,5.51e-12,22;UBERON:0006235,5.51e-12,22;UBERON:0008835,5.51e-12,22;UBERON:0003894,5.51e-12,22;UBERON:0004161,5.51e-12,22;UBERON:0008836,5.51e-12,22;UBERON:0004119,9.59e-11,118;UBERON:0000925,9.59e-11,118;UBERON:0006595,9.59e-11,118;UBERON:0005177,1.15e-10,79;UBERON:0001007,2.11e-10,116;UBERON:0001555,2.11e-10,116;UBERON:0007026,2.11e-10,116;UBERON:0004921,1.19e-09,114;UBERON:0005172,1.99e-08,49;UBERON:0005173,1.99e-08,49;UBERON:0002417,1.99e-08,49;UBERON:0000916,1.99e-08,49;UBERON:0009569,3.00e-08,66;UBERON:0000344,9.64e-08,15;UBERON:0004923,3.28e-07,24;UBERON:0001242,8.01e-07,13;UBERON:0001262,8.01e-07,13;UBERON:0004786,8.01e-07,13|phase1_expression=6.88640042550614,168.206146482172,163.799726180233,267.075898583931,267.979215521296,80.4141712457952,82.4652621302206,0,0.140788722151667,0.234064526321993,1.88339765048055,1.19658238493005,0,0.0874204024189974,15.3230490435205,31.9910922475925,58.7631977627643,0.315462165358238,0.137114433605739,1.69755860719212,49.0699784171673,0.893618560807968,1.30599894569468,200.470505760139,157.833585374213,148.151846741675,179.627752398334,140.271772478514,187.553115003441,182.21778381643,60.7541599195535,195.589447425566,196.205667239478,126.785344812351,52.570994794732,69.4860817598498,44.1005809526717,0.418531630736908,0,0,0.588231488031014,0,0.971020706062307,1.1330713617802,0.608261587317087,0.917733760808408,6.25913075478431,0.872100625521786,3.51497892375155,2.3331587888914,1.53985063787899,2.87505128729943,0,0,0,2.57259436035947,0.85960031981627,2.57836046138721,3.84401275633236,1.5869729378161,3.80298842103708,2.71075625655306,3.55717918444456,0.449949858640699,0,0,4.19440154725767,8.06858441175265,0.518448061542388,0.540023753326763,0.630974884054146,6.85562362569129,3.97563373712904,0.734944795289724,0.670918297127655,0,2.20231761998777,4.59674417106676,2.4577045320999,1.45074916503213,4.57438218012048,1.56274011167028,2.51264699101243,5.06486349028512,4.88954392885792,3.83017161115768,3.70166370077668,3.72798891650601,1.59025005999687,1.28471652181535,2.31891590961342,529.160684343553,571.17592031451,1062.67558433486,1123.46342576702,1191.30349279182,346.055051204637,0.511290967734173,0,0,6.4787973097273,1.28326477414318,0,0,17.1027922398859,19.7620695070577,18.1988800205322,459.590115869216,0.517875767294343,7.27366481417641,8.84775166507293,10.6562917409249,13.3756988408514,4.22023393547343,8.58397562090645,29.6573155538034,54.3828929015623,14.4599356919912,9.73071607144862,4.20593809863264,8.83366073841574,6.30337829075789,57.7814459776179,11.1256702864388,9.42510180660548,229.655892632524,0.718890747035522,0,0.254140454146129,5.09288173976397,6.40500843946077,1.00523481690292,6.25767552692195,2.04572365864264,2.90903262383384,2.59586020908412,2.24046600470696,13.6847667671102,36.1393544560155,345.966411077363,5.20481771850815,1.60931473103431,4.50155324513373,6.0281927134286,4.35433594568498,8.96796041993949,14.1489604085191,428.930188685288,2.80238390812695,3.40390944302075,2.11141348996739,3.72632745126877,6.11703948296315,9.05455632957633,11.5237996388448,5.7719937377363,0,0,0,3.72826390563903,2.81431271977315,0.540186184383045,1.18372367792605,1.57411385397923,1.3884040159864,0.9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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70335 | |||
|HGNC= | |||
|MCL_coexpression_id=175 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z6V2,Q9JM62 | |||
|association_with_transcript=0bp_to_ENSMUST00000040081,ENSMUST00000153167,NM_001204931,NM_139292,uc007gct.1,uc007gcu.1_5end | |||
|cluster_id=chr10:79792872..79792956,+ | |||
|description=CAGE_peak_1_at_Reep6_5end | |||
|id=chr10:79792872..79792956,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.33e-16!59;UBERON:0000160!1.12e-15!43;UBERON:0004119!4.76e-13!130;UBERON:0000925!4.76e-13!130;UBERON:0006595!4.76e-13!130;UBERON:0001007!1.14e-12!128;UBERON:0001555!1.14e-12!128;UBERON:0007026!1.14e-12!128;UBERON:0009854!3.02e-12!23;UBERON:0009856!3.02e-12!23;UBERON:0000466!4.57e-12!79;UBERON:0002365!5.18e-12!25;UBERON:0002330!5.18e-12!25;UBERON:0002107!6.03e-12!22;UBERON:0007499!6.03e-12!22;UBERON:0006925!6.03e-12!22;UBERON:0009497!6.03e-12!22;UBERON:0000015!6.03e-12!22;UBERON:0002423!6.03e-12!22;UBERON:0006235!6.03e-12!22;UBERON:0008835!6.03e-12!22;UBERON:0003894!6.03e-12!22;UBERON:0004161!6.03e-12!22;UBERON:0008836!6.03e-12!22;UBERON:0004921!7.58e-12!126;UBERON:0004185!7.58e-12!126;UBERON:0005177!3.83e-09!85;UBERON:0005172!2.12e-08!49;UBERON:0005173!2.12e-08!49;UBERON:0002417!2.12e-08!49;UBERON:0000916!2.12e-08!49;UBERON:0009569!3.18e-08!66;UBERON:0000344!1.02e-07!15;UBERON:0004923!3.45e-07!24;UBERON:0001242!8.39e-07!13;UBERON:0000060!8.39e-07!13;UBERON:0001262!8.39e-07!13;UBERON:0004786!8.39e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.56e-14,31;UBERON:0005409,4.68e-14,47;UBERON:0009854,2.75e-12,23;UBERON:0009856,2.75e-12,23;UBERON:0002365,4.72e-12,25;UBERON:0002330,4.72e-12,25;UBERON:0002107,5.51e-12,22;UBERON:0007499,5.51e-12,22;UBERON:0006925,5.51e-12,22;UBERON:0009497,5.51e-12,22;UBERON:0000015,5.51e-12,22;UBERON:0002423,5.51e-12,22;UBERON:0006235,5.51e-12,22;UBERON:0008835,5.51e-12,22;UBERON:0003894,5.51e-12,22;UBERON:0004161,5.51e-12,22;UBERON:0008836,5.51e-12,22;UBERON:0004119,9.59e-11,118;UBERON:0000925,9.59e-11,118;UBERON:0006595,9.59e-11,118;UBERON:0005177,1.15e-10,79;UBERON:0001007,2.11e-10,116;UBERON:0001555,2.11e-10,116;UBERON:0007026,2.11e-10,116;UBERON:0004921,1.19e-09,114;UBERON:0005172,1.99e-08,49;UBERON:0005173,1.99e-08,49;UBERON:0002417,1.99e-08,49;UBERON:0000916,1.99e-08,49;UBERON:0009569,3.00e-08,66;UBERON:0000344,9.64e-08,15;UBERON:0004923,3.28e-07,24;UBERON:0001242,8.01e-07,13;UBERON:0001262,8.01e-07,13;UBERON:0004786,8.01e-07,13 | |||
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| |||
|short_description=p1@Reep6 | |||
}} |
Latest revision as of 09:49, 26 September 2015
Short description: | p1@Reep6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Reep6_5end |
Coexpression cluster: | MCL_coexpression_mm9:175 |
Association with transcript: | 0bp_to_ENSMUST00000040081, ENSMUST00000153167, NM_001204931, NM_139292, uc007gct.1, uc007gcu.1_5end |
EntrezGene: | Reep6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data