FFCP PHASE1:Hg19::chr9:14910246..14910280,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:14910246..14910280,-
|short_description=p3@FREM1
|description=CAGE_peak_3_at_FREM1_5end
|association_with_transcript=-12bp_to_uc003zlm.2_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=158326 | |EntrezGene=158326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23399 | |HGNC=23399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_uc003zlm.2_5end | |||
|cluster_id=chr9:14910246..14910280,- | |||
|description=CAGE_peak_3_at_FREM1_5end | |||
|id=chr9:14910246..14910280,- | |||
|ontology_enrichment_celltype=CL:0002274!1.29e-09!5;CL:0000457!1.29e-09!5;CL:0002191!1.29e-09!5;CL:0000097!1.29e-09!5;CL:0000831!1.29e-09!5;CL:0002028!1.29e-09!5;CL:0002322!1.18e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.42e-23;5!CL:0000163;1.01e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.46e-23,5;CL:0002028,5.46e-23,5;CL:0000163,1.13e-12,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.31e-15;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-35!115;UBERON:0001049!4.75e-23!57;UBERON:0005068!4.75e-23!57;UBERON:0006241!4.75e-23!57;UBERON:0007135!4.75e-23!57;UBERON:0001017!7.53e-19!82;UBERON:0002346!8.52e-19!90;UBERON:0005743!1.06e-18!86;UBERON:0002616!1.24e-18!59;UBERON:0000073!8.20e-18!94;UBERON:0001016!8.20e-18!94;UBERON:0000955!1.67e-17!69;UBERON:0006238!1.67e-17!69;UBERON:0003076!3.57e-17!15;UBERON:0003057!3.57e-17!15;UBERON:0003075!3.03e-16!86;UBERON:0007284!3.03e-16!86;UBERON:0004733!3.88e-13!12;UBERON:0002028!3.88e-13!12;UBERON:0007277!3.88e-13!12;UBERON:0004732!6.35e-12!13;UBERON:0002780!6.53e-11!41;UBERON:0001890!6.53e-11!41;UBERON:0006240!6.53e-11!41;UBERON:0003080!1.59e-10!42;UBERON:0000153!3.34e-10!129;UBERON:0007811!3.34e-10!129;UBERON:0002020!6.51e-10!34;UBERON:0003528!6.51e-10!34;UBERON:0000924!1.66e-09!173;UBERON:0006601!1.66e-09!173;UBERON:0002298!2.14e-09!8;UBERON:0002791!4.07e-09!33;UBERON:0002619!5.48e-09!22;UBERON:0001893!9.86e-09!34;UBERON:0002680!1.18e-08!9;UBERON:0001895!1.18e-08!9;UBERON:0010092!1.18e-08!9;UBERON:0001950!1.80e-08!20;UBERON:0000033!2.14e-08!123;UBERON:0004121!5.30e-08!169;UBERON:0000956!1.40e-07!25;UBERON:0000203!1.40e-07!25;UBERON:0001869!3.63e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;3.32e-15;5!UBERON:0005423;3.32e-15;5!UBERON:0001896;1.68e-14;3!UBERON:0005290;1.68e-14;3!UBERON:0004733;7.38e-14;12!UBERON:0002028;7.38e-14;12!UBERON:0004732;9.62e-13;13!UBERON:0002346;3.84e-11;4!UBERON:0000923;3.84e-11;4!UBERON:0010316;3.84e-11;4!UBERON:0005291;3.84e-11;4!UBERON:0002037;5.16e-08;6!UBERON:0002298;1.78e-07;6!UBERON:0006947;2.90e-07;3!UBERON:0004054;2.90e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,8.78e-15,15;UBERON:0003057,8.78e-15,15;UBERON:0001896,1.46e-14,3;UBERON:0005290,1.46e-14,3;UBERON:0010096,1.46e-14,3;UBERON:0004733,7.06e-14,12;UBERON:0002028,7.06e-14,12;UBERON:0007277,7.06e-14,12;UBERON:0004732,9.25e-13,13;UBERON:0002037,5.29e-08,6;UBERON:0006215,5.29e-08,6;UBERON:0007023,8.20e-08,114;UBERON:0002298,1.66e-07,6;UBERON:0006947,2.52e-07,3;UBERON:0004054,2.52e-07,3 | |||
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| ||
|short_description=p3@FREM1 | |||
}} | }} |
Latest revision as of 18:45, 16 September 2015
Short description: | p3@FREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FREM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_uc003zlm.2_5end |
EntrezGene: | FREM1 |
HGNC: | 23399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.46e-23 | 5 |
basophil mast progenitor cell | 5.46e-23 | 5 |
endocrine cell | 1.13e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 8.78e-15 | 15 |
chordal neural plate | 8.78e-15 | 15 |
medulla oblongata | 1.46e-14 | 3 |
myelencephalon | 1.46e-14 | 3 |
future myelencephalon | 1.46e-14 | 3 |
segmental subdivision of hindbrain | 7.06e-14 | 12 |
hindbrain | 7.06e-14 | 12 |
presumptive hindbrain | 7.06e-14 | 12 |
segmental subdivision of nervous system | 9.25e-13 | 13 |
cerebellum | 5.29e-08 | 6 |
rhombic lip | 5.29e-08 | 6 |
adult organism | 8.20e-08 | 114 |
brainstem | 1.66e-07 | 6 |
male genital duct | 2.52e-07 | 3 |
internal male genitalia | 2.52e-07 | 3 |