FFCP PHASE1:Mm9::chr11:58203590..58203637,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1293|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:58203590..58203637,+|id=chr11:58203590..58203637,+|ontology_enrichment_celltype=CL:0002563!6.10e-11!9;CL:0002251!6.10e-11!9;CL:0000239!2.70e-08!6;CL:0000677!2.70e-08!6;CL:0000212!2.70e-08!6;CL:0000584!2.70e-08!6;CL:0000075!6.40e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,1.37e-16,9;CL:0002251,1.37e-16,9;CL:0000239,2.37e-12,6;CL:0000677,2.37e-12,6;CL:0000584,2.37e-12,6;CL:0000075,1.83e-10,7;CL:0002076,3.19e-09,15;CL:0000066,5.85e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.33e-25!59;UBERON:0000160!5.04e-22!43;UBERON:0000344!3.12e-18!15;UBERON:0001242!1.04e-15!13;UBERON:0000060!1.04e-15!13;UBERON:0001262!1.04e-15!13;UBERON:0004786!1.04e-15!13;UBERON:0003350!6.10e-11!9;UBERON:0004808!6.10e-11!9;UBERON:0001277!6.10e-11!9;UBERON:0004923!6.69e-11!24;UBERON:0001007!1.65e-08!128;UBERON:0001555!1.65e-08!128;UBERON:0007026!1.65e-08!128;UBERON:0000485!1.69e-08!11;UBERON:0004119!3.48e-08!130;UBERON:0000925!3.48e-08!130;UBERON:0006595!3.48e-08!130;UBERON:0004921!2.26e-07!126;UBERON:0004185!2.26e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.17e-50,47;UBERON:0000160,8.37e-49,31;UBERON:0000344,2.67e-28,15;UBERON:0001242,3.06e-24,13;UBERON:0001262,3.06e-24,13;UBERON:0004786,3.06e-24,13;UBERON:0004923,2.44e-18,24;UBERON:0001007,6.55e-18,116;UBERON:0001555,6.55e-18,116;UBERON:0007026,6.55e-18,116;UBERON:0004119,1.88e-17,118;UBERON:0000925,1.88e-17,118;UBERON:0006595,1.88e-17,118;UBERON:0003350,1.37e-16,9;UBERON:0004808,1.37e-16,9;UBERON:0001277,1.37e-16,9;UBERON:0004921,1.10e-15,114;UBERON:0000485,3.09e-13,11;UBERON:0002108,2.88e-09,4;UBERON:0000331,1.37e-07,3;UBERON:0002116,1.37e-07,3;UBERON:0001204,1.37e-07,3;UBERON:0001168,1.37e-07,3|phase1_expression=0,10.4692622291808,13.6499771816861,20.8700305801713,17.0304548181758,9.23335995515394,21.4923629347884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,31.8384921358879,20.4174260149781,11.4846392823004,3.01533397311352,20.9007095705312,63.2777986789725,18.6502296022349,30.1553494491214,0,0,0,1.73310971850765,6.98185510505668,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,10.5049169341535,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,44.7340226923493,0,0,14.8165092020983,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,17.1851475734899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,8.72686869989696,0,0,1.80414445850931,8.0673409849337,4.00280478920767,6.08722003560189,17.5575752771469,6.42325923423642,11.8127548136127,9.94782360205754,7.21367122340745,18.8752075817387,15.9942156907274,15.732160587095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,11.0762717919343,0,0,0,0,0,0,0,0,0,0,75.418978823194,0,0.406638934253697,1.18805874903981,1.04544148007234,3.05707589244649,5.39457385539283,2.64491058321075,4.4498510137285,47.1798502782126,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.760437899670719,0.565879024158229,0.187283014939765,0.192075457214608,0,0,0.347652977834566,0,0,0.441596760403192,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0.818462086339379,0.309873682371932,0,0,0.701794825336225,1.28922632428979,0.382576664137687,0,0.463735671240843|short_description=p@chr11:58203590..58203637,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1293 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:58203590..58203637,+ | |||
|description=CAGE_peak_at_chr11:58203590..58203637,+ | |||
|id=chr11:58203590..58203637,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.10e-11!9;CL:0002251!6.10e-11!9;CL:0000239!2.70e-08!6;CL:0000677!2.70e-08!6;CL:0000212!2.70e-08!6;CL:0000584!2.70e-08!6;CL:0000075!6.40e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.37e-16,9;CL:0002251,1.37e-16,9;CL:0000239,2.37e-12,6;CL:0000677,2.37e-12,6;CL:0000584,2.37e-12,6;CL:0000075,1.83e-10,7;CL:0002076,3.19e-09,15;CL:0000066,5.85e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.33e-25!59;UBERON:0000160!5.04e-22!43;UBERON:0000344!3.12e-18!15;UBERON:0001242!1.04e-15!13;UBERON:0000060!1.04e-15!13;UBERON:0001262!1.04e-15!13;UBERON:0004786!1.04e-15!13;UBERON:0003350!6.10e-11!9;UBERON:0004808!6.10e-11!9;UBERON:0001277!6.10e-11!9;UBERON:0004923!6.69e-11!24;UBERON:0001007!1.65e-08!128;UBERON:0001555!1.65e-08!128;UBERON:0007026!1.65e-08!128;UBERON:0000485!1.69e-08!11;UBERON:0004119!3.48e-08!130;UBERON:0000925!3.48e-08!130;UBERON:0006595!3.48e-08!130;UBERON:0004921!2.26e-07!126;UBERON:0004185!2.26e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.17e-50,47;UBERON:0000160,8.37e-49,31;UBERON:0000344,2.67e-28,15;UBERON:0001242,3.06e-24,13;UBERON:0001262,3.06e-24,13;UBERON:0004786,3.06e-24,13;UBERON:0004923,2.44e-18,24;UBERON:0001007,6.55e-18,116;UBERON:0001555,6.55e-18,116;UBERON:0007026,6.55e-18,116;UBERON:0004119,1.88e-17,118;UBERON:0000925,1.88e-17,118;UBERON:0006595,1.88e-17,118;UBERON:0003350,1.37e-16,9;UBERON:0004808,1.37e-16,9;UBERON:0001277,1.37e-16,9;UBERON:0004921,1.10e-15,114;UBERON:0000485,3.09e-13,11;UBERON:0002108,2.88e-09,4;UBERON:0000331,1.37e-07,3;UBERON:0002116,1.37e-07,3;UBERON:0001204,1.37e-07,3;UBERON:0001168,1.37e-07,3 | |||
|phase1_expression=0,10.4692622291808,13.6499771816861,20.8700305801713,17.0304548181758,9.23335995515394,21.4923629347884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,31.8384921358879,20.4174260149781,11.4846392823004,3.01533397311352,20.9007095705312,63.2777986789725,18.6502296022349,30.1553494491214,0,0,0,1.73310971850765,6.98185510505668,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,10.5049169341535,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,44.7340226923493,0,0,14.8165092020983,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,17.1851475734899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,8.72686869989696,0,0,1.80414445850931,8.0673409849337,4.00280478920767,6.08722003560189,17.5575752771469,6.42325923423642,11.8127548136127,9.94782360205754,7.21367122340745,18.8752075817387,15.9942156907274,15.732160587095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,11.0762717919343,0,0,0,0,0,0,0,0,0,0,75.418978823194,0,0.406638934253697,1.18805874903981,1.04544148007234,3.05707589244649,5.39457385539283,2.64491058321075,4.4498510137285,47.1798502782126,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.760437899670719,0.565879024158229,0.187283014939765,0.192075457214608,0,0,0.347652977834566,0,0,0.441596760403192,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0.818462086339379,0.309873682371932,0,0,0.701794825336225,1.28922632428979,0.382576664137687,0,0.463735671240843 | |||
|short_description=p@chr11:58203590..58203637,+ | |||
}} |
Latest revision as of 04:11, 6 August 2015
Short description: | p@chr11:58203590..58203637, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58203590..58203637, + |
Coexpression cluster: | MCL_coexpression_mm9:1293 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.37e-16 | 9 |
epithelial cell of alimentary canal | 1.37e-16 | 9 |
brush border epithelial cell | 2.37e-12 | 6 |
gut absorptive cell | 2.37e-12 | 6 |
enterocyte | 2.37e-12 | 6 |
columnar/cuboidal epithelial cell | 1.83e-10 | 7 |
endo-epithelial cell | 3.19e-09 | 15 |
epithelial cell | 5.85e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.17e-50 | 47 |
intestine | 8.37e-49 | 31 |
mucosa | 2.67e-28 | 15 |
intestinal mucosa | 3.06e-24 | 13 |
wall of intestine | 3.06e-24 | 13 |
gastrointestinal system mucosa | 3.06e-24 | 13 |
organ component layer | 2.44e-18 | 24 |
digestive system | 6.55e-18 | 116 |
digestive tract | 6.55e-18 | 116 |
primitive gut | 6.55e-18 | 116 |
endoderm-derived structure | 1.88e-17 | 118 |
endoderm | 1.88e-17 | 118 |
presumptive endoderm | 1.88e-17 | 118 |
epithelium of mucosa | 1.37e-16 | 9 |
gastrointestinal system epithelium | 1.37e-16 | 9 |
intestinal epithelium | 1.37e-16 | 9 |
subdivision of digestive tract | 1.10e-15 | 114 |
simple columnar epithelium | 3.09e-13 | 11 |
small intestine | 2.88e-09 | 4 |
ileal mucosa | 1.37e-07 | 3 |
ileum | 1.37e-07 | 3 |
mucosa of small intestine | 1.37e-07 | 3 |
wall of small intestine | 1.37e-07 | 3 |