FFCP PHASE1:Hg19::chr2:99485806..99485815,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=343990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33454 | |||
|TSSclassifier=strong | |||
|UniProt=C9JK00 | |||
|association_with_transcript=9bp_to_ENST00000423771_5end | |||
|cluster_id=chr2:99485806..99485815,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_9_at_C2orf55_5end | |||
|id=chr2:99485806..99485815,- | |||
|ontology_enrichment_celltype=CL:0000066!7.07e-11!254;CL:0000039!8.98e-10!7;CL:0000586!8.98e-10!7;CL:0002541!9.56e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.64e-60;3!CL:0000349;2.87e-26;19!CL:0000039;4.10e-26;7!CL:0000586;4.10e-26;7!CL:0002537;8.14e-17;5!CL:0002097;3.70e-11;2!CL:0000174;7.26e-08;3!CL:0000134;6.74e-07;55!CL:0000723;8.39e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.65e-60,3;CL:0000349,2.72e-26,19;CL:0000039,3.45e-26,7;CL:0000586,3.45e-26,7;CL:0002537,7.51e-17,5;CL:0002097,4.09e-11,2;CL:0000174,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.52e-20!106;DOID:0050687!4.07e-17!143;DOID:299!3.91e-12!25;DOID:162!1.44e-10!235;DOID:14566!3.99e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;8.94e-09;22!DOID:2994;8.94e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.47e-09,22;DOID:2994,8.47e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.96e-12!14;UBERON:0000158!5.96e-12!14;UBERON:0000476!9.56e-10!3;UBERON:0000920!9.56e-10!3;UBERON:0000478!1.64e-09!24;UBERON:0004119!8.82e-08!169;UBERON:0000925!8.82e-08!169;UBERON:0006595!8.82e-08!169;UBERON:0001007!5.25e-07!155;UBERON:0001555!5.25e-07!155;UBERON:0007026!5.25e-07!155;UBERON:0003124!5.52e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.64e-60;3!UBERON:0000920;3.64e-60;3!UBERON:0005631;1.39e-49;10!UBERON:0000158;1.39e-49;10!UBERON:0000478;7.46e-21;24!UBERON:0000305;2.66e-12;7!UBERON:0002369;7.26e-08;3!UBERON:0001235;7.26e-08;3!UBERON:0006858;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.65e-60,3;UBERON:0005631,1.46e-35,14;UBERON:0000158,1.46e-35,14;UBERON:0003124,2.67e-26,7;UBERON:0000478,7.16e-21,24;UBERON:0000305,2.51e-12,7;UBERON:0004871,6.61e-11,8;UBERON:0002369,7.76e-08,3;UBERON:0001235,7.76e-08,3;UBERON:0006858,7.76e-08,3;UBERON:0004923,1.14e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,2.62618933211459,0.296964680832639,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,1.84451123510448,2.51321404347362,2.93347904189422,3.19001159731919,1.37396390102793,7.99552164027952,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0.995261931078505,0.265372693510018,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.293977192243133,0,0,0,0,0,0.164230914106418,0,0,0,0,0,0,0.391102765469606,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0,0,0.617602894321944,0,0.176689145945881,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0.231051332300676,0,0,0,0.150420656698515,0,0,0.785720083444267,0,0.443568258651136,0,0,0,0,0,0.548257766857182,0,0,0.255524855279191,0,0,0,0,0.975726071789027,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.335566295393377,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0.603851374266694,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0.435433495793923,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@C2orf55 | |||
}} |
Latest revision as of 04:12, 19 September 2015
Short description: | p9@C2orf55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_C2orf55_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 9bp_to_ENST00000423771_5end |
EntrezGene: | C2orf55 |
HGNC: | 33454 |
UniProt: | C9JK00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.65e-60 | 3 |
extraembryonic cell | 2.72e-26 | 19 |
germ line cell | 3.45e-26 | 7 |
germ cell | 3.45e-26 | 7 |
amnion mesenchymal stem cell | 7.51e-17 | 5 |
cortical cell of adrenal gland | 4.09e-11 | 2 |
steroid hormone secreting cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.65e-60 | 3 |
extraembryonic membrane | 1.46e-35 | 14 |
membranous layer | 1.46e-35 | 14 |
chorion | 2.67e-26 | 7 |
extraembryonic structure | 7.16e-21 | 24 |
amnion | 2.51e-12 | 7 |
somatic layer of lateral plate mesoderm | 6.61e-11 | 8 |
adrenal gland | 7.76e-08 | 3 |
adrenal cortex | 7.76e-08 | 3 |
adrenal/interrenal gland | 7.76e-08 | 3 |
organ component layer | 1.14e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.47e-09 | 22 |
germ cell cancer | 8.47e-09 | 22 |