FFCP PHASE1:Hg19::chr3:101504030..101504047,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91775 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28238 | |||
|TSSclassifier=strong | |||
|UniProt=Q969Y0 | |||
|association_with_transcript=-196bp_to_ENST00000422132_5end | |||
|cluster_id=chr3:101504030..101504047,+ | |||
|coexpression_cluster_id=C302 | |||
|description=CAGE_peak_12_at_FAM55C_5end | |||
|id=chr3:101504030..101504047,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.65e-38!112;CL:0000049!1.65e-38!112;CL:0000766!1.56e-34!76;CL:0002194!1.85e-32!63;CL:0000576!1.85e-32!63;CL:0000040!1.85e-32!63;CL:0000559!1.85e-32!63;CL:0002009!2.53e-31!65;CL:0002057!5.16e-30!42;CL:0000839!9.26e-29!70;CL:0000557!2.73e-28!71;CL:0000860!9.35e-28!45;CL:0000037!1.75e-24!172;CL:0000566!1.75e-24!172;CL:0002032!4.83e-24!165;CL:0000837!4.83e-24!165;CL:0000988!9.14e-23!182;CL:0000738!7.84e-18!140;CL:0002087!1.54e-16!119;CL:0002031!3.59e-14!124;CL:0000134!3.48e-08!358;CL:0002320!6.78e-08!365;CL:0000875!2.27e-07!3;CL:0002396!2.27e-07!3;CL:0000767!2.94e-07!3;CL:0000219!7.07e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000763;2.64e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.54e-14,108;CL:0000049,1.54e-14,108;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177;CL:0002194,4.94e-07,59;CL:0000576,4.94e-07,59;CL:0000040,4.94e-07,59;CL:0000559,4.94e-07,59;CL:0002009,8.13e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!8.22e-15!31;DOID:1240!2.23e-11!39;DOID:2531!2.95e-08!51;DOID:0060083!2.95e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.21e-36;31!DOID:1240;7.34e-26;39!DOID:2531;3.00e-15;51!DOID:0060083;3.00e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.17e-39,31;DOID:1240,4.58e-31,39;DOID:2531,8.34e-24,51;DOID:0060083,8.34e-24,51;DOID:0050686,8.09e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.25e-26!102;UBERON:0003061!1.25e-26!102;UBERON:0002371!1.38e-24!80;UBERON:0002193!9.37e-24!112;UBERON:0001474!1.53e-22!86;UBERON:0004765!1.73e-18!101;UBERON:0001434!1.73e-18!101;UBERON:0002405!1.18e-15!115;UBERON:0003081!1.19e-11!216;UBERON:0002204!2.67e-09!167;UBERON:0002384!1.68e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0.645484683583826,1.35426486594342,0,0,0.224723484445085,0.612167784741805,0,0,0.659702600373432,0.398927315243264,0,0,0,0,0,0,0.65156653411535,0,0,0.632924774881769,0.422510572623884,0,0,0.673971786878971,0.300353785683013,0.803627933485401,0.570025487482497,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,1.34053759092657,0,0.649243880549111,0.280797178113459,0,0.313359791546046,0,0,0,0,2.55507742614196,4.46556948182494,3.6868891717015,4.02616994206349,4.67177596793344,9.96479286550406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@FAM55C | |||
}} |
Latest revision as of 07:06, 19 September 2015
Short description: | p12@FAM55C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FAM55C_5end |
Coexpression cluster: | C302_acute_peripheral_Neutrophils_NK_myelodysplastic_CD34_carcinoid |
Association with transcript: | -196bp_to_ENST00000422132_5end |
EntrezGene: | FAM55C |
HGNC: | 28238 |
UniProt: | Q969Y0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.54e-14 | 108 |
common myeloid progenitor | 1.54e-14 | 108 |
hematopoietic oligopotent progenitor cell | 9.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.03e-10 | 161 |
hematopoietic stem cell | 2.31e-09 | 168 |
hematopoietic cell | 6.97e-09 | 177 |
monopoietic cell | 4.94e-07 | 59 |
monocyte | 4.94e-07 | 59 |
monoblast | 4.94e-07 | 59 |
promonocyte | 4.94e-07 | 59 |
macrophage dendritic cell progenitor | 8.13e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.17e-39 | 31 |
leukemia | 4.58e-31 | 39 |
hematologic cancer | 8.34e-24 | 51 |
immune system cancer | 8.34e-24 | 51 |
organ system cancer | 8.09e-09 | 137 |