FFCP PHASE1:Hg19::chr3:12941386..12941427,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9922 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29112 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=195bp_to_BC008088_5end | |||
|cluster_id=chr3:12941386..12941427,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_7_at_IQSEC1_5end | |||
|id=chr3:12941386..12941427,- | |||
|ontology_enrichment_celltype=CL:0002087!1.97e-16!119;CL:0002057!2.23e-16!42;CL:0000860!1.10e-14!45;CL:0000738!1.14e-14!140;CL:0002031!2.73e-13!124;CL:0000766!2.70e-12!76;CL:0002194!7.59e-11!63;CL:0000576!7.59e-11!63;CL:0000040!7.59e-11!63;CL:0000559!7.59e-11!63;CL:0002009!7.27e-10!65;CL:0000839!1.66e-09!70;CL:0002032!1.01e-08!165;CL:0000837!1.01e-08!165;CL:0000557!1.07e-08!71;CL:0000037!1.09e-08!172;CL:0000566!1.09e-08!172;CL:0000988!1.56e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.21e-27;33!CL:0002057;6.21e-27;33!CL:0000473;6.61e-24;39!CL:0000234;6.61e-24;39!CL:0000576;5.43e-17;48!CL:0000766;4.34e-12;69!CL:0002087;1.44e-08;104!CL:0000763;4.43e-07;100!CL:0000738;5.43e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.95e-33,48;CL:0000234,6.95e-33,48;CL:0000860,5.91e-31,42;CL:0002057,5.91e-31,42;CL:0000766,1.13e-25,72;CL:0002194,1.80e-24,59;CL:0000576,1.80e-24,59;CL:0000040,1.80e-24,59;CL:0000559,1.80e-24,59;CL:0002009,2.16e-23,61;CL:0002087,2.31e-22,115;CL:0000738,3.49e-22,136;CL:0000839,5.58e-21,66;CL:0000557,1.53e-20,67;CL:0002031,1.06e-19,120;CL:0002032,9.07e-16,161;CL:0000837,9.07e-16,161;CL:0000037,1.63e-15,168;CL:0000988,6.53e-15,177;CL:0000763,6.18e-14,108;CL:0000049,6.18e-14,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.06e-08!102;UBERON:0003061!5.06e-08!102;UBERON:0001049!2.27e-07!57;UBERON:0005068!2.27e-07!57;UBERON:0006241!2.27e-07!57;UBERON:0007135!2.27e-07!57;UBERON:0002371!2.80e-07!80;UBERON:0002020!4.18e-07!34;UBERON:0003528!4.18e-07!34;UBERON:0005743!6.66e-07!86;UBERON:0002193!9.05e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.03e-17,76;UBERON:0002390,5.43e-17,98;UBERON:0003061,5.43e-17,98;UBERON:0001474,2.87e-15,82;UBERON:0002193,1.54e-14,108;UBERON:0001434,4.68e-14,100;UBERON:0004765,3.41e-13,90;UBERON:0002405,1.64e-12,93 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,1.0007329835313,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.958120975510189,0.376627918784408,0.382067028739756,0.492603536699674,0.550975469195755,0,0.383829398097213,0.619264493264304,0,0,0,0.232401601740905,0.284338464974843,0.293600439334847,1.66198622559563,2.4065333696417,1.73608696572681,0.447830948479849,0,0,1.30858414901608,1.51150377475524,0.727752183563449,1.62700325833979,0.822335776043652,3.40677007984614,1.1507695692886,2.81776777182011,1.41889337933151,1.03423704220986,0.645484683583826,0,3.57660445130949,1.36453075028923,0.898893937780338,3.36692281607993,1.28371610830437,1.91801137739712,2.63881040149373,2.19410023383795,2.13112375266347,2.32167390902867,0,0,3.51748131359441,3.65038042894141,1.73751075764093,1.81619850790011,0.368277635987565,0.316462387440884,0.845021145247767,1.27562579979026,0.628975936525128,1.23561494261145,1.65194582125657,0.48217676009124,0.285012743741249,0.79566670879636,0,1.75996244461323,1.09227722252426,0,0,0,0.574752439954483,0.661044872784862,0.954053754535364,1.70763890732835,2.34894875748376,1.52909291250092,1.32171328579026,0,0.263384084775077,0.590129310341499,1.96505381374582,0.822405995998037,0.334372990781356,0.32592226663359,0,1.94826728407911,0.222820913770347,1.76763544484902,0.886135578334485,1.08321545506006,0.25618263945135,0.520237390239513,0.493313713811028,0.276350017785848,0.579606171470105,0.296573126324121,0.802622484269139,2.09071047609954,0.566546713487831,0.766440987203842,0,1.26509846009751,0.318565414324097,0,0,0.150575119077773,0.255973222308837,1.24930726552346,0.473554504088034,0,0.201606743224732,1.06976078313403,0.434473211648397,0,0,0,1.0843174571537,0,0.724232594804119,0,0.973269740605272,0.0945348171640679,0,0.263504357079378,0.327447688744282,0,0,0,0.348259474598534,0.797747763113191,0.476981248610684,0,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0,0,0.112611480483322,0,0,0,2.63560834872127,3.87780264148325,0,0.496971951695318,0.25326102332916,0,0.573673241497627,0.354668382198357,0,1.06748995729705,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.448346041655403,0,0,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0.125118519871964,0,0,0.30648779579902,0,0,0.538168907066586,0.640672166455702,0.847727604638247,1.20036438433761,0.206105058476878,0.772921620136887,0.37223371266318,0.168776332241266,0.389748020644795,1.00973509697646,0.0920498986422993,0.484938170456436,0.355009592516614,0,0.169560592310488,0,0,0,0.243947412259191,0,0.348581828608555,0.621966330092223,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0.482022059766964,0.330881918197182,0,0,0,0,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0.491953754172454,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0,0,0,0.570762456703795,0.790204397959275,0,0,1.17002132569619,0.297262324577456,0,0,0,0.179117045405697,0.581267877027924,0.766765358330422,0,0.088048434013226,0.414656231081544,0.432359860250884,0,0.063497894292169,0,1.17217447210047,1.71072446022705,0.308482478109971,0.300343057843917,0.285826432630578,0.112131084345361,0,0,0,0,1.690605505112,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,1.2162378064119,0.502257091432126,6.32501818449095,0.239624855491583,1.14861935834114,0,0,0,0,0,0,1.72502059887614,1.28343036279748,0.254094624222463,1.30139853857622,0,0,0,4.49404214368309,29.9161459204025,0.828831026872071,0.36807447515742,0,0,0,0.356857977594324,0.473107245101804,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0.343143423810856,0.413536052245775,1.50999940573032,0.74709290462411,0,0,0,0.744323423456331,0.460385919864187,0.280660094433074,0.512556597022804,1.53512174720011,0.321707842287215,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.241718899183244,0.601519410909855,0.184161977871793,0,0,0.262248829918848,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0.328014645699706,0.325378394664303,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0.356128142586949,0.495854746082934,0,0.382838137483752,0,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.54907405947211,0,0.202182481573316,1.58510321173008,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,1.05553817648832,1.31717957183961,0,0,0,0,0,0,0.43050537267123,1.68471475667626,0.443430153536676,0,1.01489521846434,0,1.70894156152249,0.476463550915578,0.411362273086194,1.94541993357815,0,1.58625035258854,0.213648142254946,0,0.490080431962063,0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| |||
|short_description=p7@IQSEC1 | |||
}} |
Latest revision as of 18:08, 24 September 2015
Short description: | p7@IQSEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IQSEC1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 195bp_to_BC008088_5end |
EntrezGene: | IQSEC1 |
HGNC: | 29112 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.95e-33 | 48 |
phagocyte | 6.95e-33 | 48 |
classical monocyte | 5.91e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.91e-31 | 42 |
myeloid leukocyte | 1.13e-25 | 72 |
monopoietic cell | 1.80e-24 | 59 |
monocyte | 1.80e-24 | 59 |
monoblast | 1.80e-24 | 59 |
promonocyte | 1.80e-24 | 59 |
macrophage dendritic cell progenitor | 2.16e-23 | 61 |
nongranular leukocyte | 2.31e-22 | 115 |
leukocyte | 3.49e-22 | 136 |
myeloid lineage restricted progenitor cell | 5.58e-21 | 66 |
granulocyte monocyte progenitor cell | 1.53e-20 | 67 |
hematopoietic lineage restricted progenitor cell | 1.06e-19 | 120 |
hematopoietic oligopotent progenitor cell | 9.07e-16 | 161 |
hematopoietic multipotent progenitor cell | 9.07e-16 | 161 |
hematopoietic stem cell | 1.63e-15 | 168 |
hematopoietic cell | 6.53e-15 | 177 |
myeloid cell | 6.18e-14 | 108 |
common myeloid progenitor | 6.18e-14 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.03e-17 | 76 |
hematopoietic system | 5.43e-17 | 98 |
blood island | 5.43e-17 | 98 |
bone element | 2.87e-15 | 82 |
hemolymphoid system | 1.54e-14 | 108 |
skeletal system | 4.68e-14 | 100 |
skeletal element | 3.41e-13 | 90 |
immune system | 1.64e-12 | 93 |