FFCP PHASE1:Hg19::chr9:6757634..6757655,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:6757634..6757655,+
|short_description=p5@KDM4C
|description=CAGE_peak_5_at_KDM4C_5end
|association_with_transcript=0bp_to_ENST00000381306,ENST00000381309,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23081 | |EntrezGene=23081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17071 | |HGNC=17071 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H3R0,B0QZ60,F8WCN1,F5H347,B4E239,B4E1Y4,B4E142,B7Z3V6 | |UniProt=Q9H3R0,B0QZ60,F8WCN1,F5H347,B4E239,B4E1Y4,B4E142,B7Z3V6 | ||
|association_with_transcript=0bp_to_ENST00000381306,ENST00000381309,ENST00000401787,ENST00000438023,ENST00000543771,NM_001146694,NM_001146695,NM_015061,uc003zkg.2,uc003zkh.2,uc010mhv.2,uc010mhw.2,uc011lmi.1,uc011lmj.1,uc011lmk.1_5end | |||
|cluster_id=chr9:6757634..6757655,+ | |||
|description=CAGE_peak_5_at_KDM4C_5end | |||
|id=chr9:6757634..6757655,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.11e-29!172;CL:0000566!1.11e-29!172;CL:0000738!4.52e-29!140;CL:0000988!1.00e-28!182;CL:0002031!4.46e-27!124;CL:0002087!5.62e-27!119;CL:0002032!1.33e-26!165;CL:0000837!1.33e-26!165;CL:0000838!2.91e-20!52;CL:0000542!1.24e-19!53;CL:0000051!1.24e-19!53;CL:0000791!2.99e-11!18;CL:0000789!2.99e-11!18;CL:0002420!2.99e-11!18;CL:0002419!2.99e-11!18;CL:0000790!2.99e-11!18;CL:0000084!8.13e-11!25;CL:0000827!8.13e-11!25;CL:0000557!6.30e-10!71;CL:0000763!8.55e-10!112;CL:0000049!8.55e-10!112;CL:0000945!4.87e-09!24;CL:0000826!4.87e-09!24;CL:0000839!7.00e-09!70;CL:0000236!1.34e-08!14;CL:0000766!3.53e-08!76;CL:0002009!3.80e-08!65;CL:0002194!5.72e-08!63;CL:0000576!5.72e-08!63;CL:0000040!5.72e-08!63;CL:0000559!5.72e-08!63;CL:0000625!1.31e-07!11;CL:0000860!5.49e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.31e-13;53!CL:0000791;5.12e-13;18!CL:0000789;5.12e-13;18!CL:0002419;5.12e-13;18!CL:0000084;1.51e-11;25!CL:0000236;3.35e-10;13!CL:0000945;6.74e-10;24!CL:0000625;1.41e-08;11!CL:0002087;2.83e-08;104!CL:0000738;4.95e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.43e-30,136;CL:0000037,1.34e-29,168;CL:0000988,6.30e-29,177;CL:0002087,3.34e-27,115;CL:0002031,3.59e-27,120;CL:0002032,3.41e-26,161;CL:0000837,3.41e-26,161;CL:0000838,1.22e-21,52;CL:0000542,8.83e-21,53;CL:0000051,8.83e-21,53;CL:0000791,6.69e-13,18;CL:0000789,6.69e-13,18;CL:0002420,6.69e-13,18;CL:0002419,6.69e-13,18;CL:0000790,6.69e-13,18;CL:0000084,1.14e-11,25;CL:0000827,1.14e-11,25;CL:0000236,8.41e-10,14;CL:0000945,2.61e-09,24;CL:0000826,2.61e-09,24;CL:0000557,3.98e-09,67;CL:0000763,6.42e-09,108;CL:0000049,6.42e-09,108;CL:0000625,1.22e-08,11;CL:0000766,2.06e-08,72;CL:0000839,2.30e-08,66;CL:0002194,2.89e-07,59;CL:0000576,2.89e-07,59;CL:0000040,2.89e-07,59;CL:0000559,2.89e-07,59;CL:0002009,3.38e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000051;4.31e-13;53!CL:0000790;5.12e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.21e-12!102;UBERON:0003061!2.21e-12!102;UBERON:0002193!2.47e-12!112;UBERON:0002405!2.20e-07!115;UBERON:0002371!2.34e-07!80;UBERON:0001474!6.37e-07!86;UBERON:0007023!8.15e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.98e-13,108;UBERON:0002390,6.16e-13,98;UBERON:0003061,6.16e-13,98;UBERON:0002405,1.45e-09,93;UBERON:0002371,2.27e-07,76;UBERON:0001474,6.02e-07,82 | |||
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| ||
|short_description=p5@KDM4C | |||
}} | }} |
Latest revision as of 15:15, 17 September 2015
Short description: | p5@KDM4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KDM4C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000381306, ENST00000381309, ENST00000401787, ENST00000438023, ENST00000543771, NM_001146694, NM_001146695, NM_015061, uc003zkg.2, uc003zkh.2, uc010mhv.2, uc010mhw.2, uc011lmi.1, uc011lmj.1, uc011lmk.1_5end |
EntrezGene: | KDM4C |
HGNC: | 17071 |
UniProt: | Q9H3R0B0QZ60F8WCN1F5H347B4E239B4E1Y4B4E142B7Z3V6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.98e-13 | 108 |
hematopoietic system | 6.16e-13 | 98 |
blood island | 6.16e-13 | 98 |
immune system | 1.45e-09 | 93 |
bone marrow | 2.27e-07 | 76 |
bone element | 6.02e-07 | 82 |