FFCP PHASE1:Hg19::chr3:151961499..151961512,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4154 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6923 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-104bp_to_ENST00000477171_5end | |||
|cluster_id=chr3:151961499..151961512,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_17_at_MBNL1_5end | |||
|id=chr3:151961499..151961512,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.52e-30!172;CL:0000566!4.52e-30!172;CL:0000791!4.60e-28!18;CL:0000789!4.60e-28!18;CL:0002420!4.60e-28!18;CL:0002419!4.60e-28!18;CL:0000790!4.60e-28!18;CL:0000988!3.26e-27!182;CL:0002032!3.83e-25!165;CL:0000837!3.83e-25!165;CL:0000542!1.64e-24!53;CL:0000051!1.64e-24!53;CL:0000838!1.46e-23!52;CL:0000738!1.63e-23!140;CL:0000084!2.90e-23!25;CL:0000827!2.90e-23!25;CL:0002087!3.28e-22!119;CL:0002031!2.96e-18!124;CL:0000625!9.75e-18!11;CL:0000624!3.39e-11!6;CL:0000763!7.01e-07!112;CL:0000049!7.01e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.12e-42;18!CL:0000789;1.12e-42;18!CL:0002419;1.12e-42;18!CL:0000084;2.06e-37;25!CL:0000625;3.40e-27;11!CL:0000624;5.18e-20;6!CL:0000542;1.05e-11;53!CL:0000898;9.77e-11;3!CL:0000226;4.27e-10;3!CL:0000842;4.27e-10;3!CL:0000623;5.31e-10;3!CL:0000815;1.46e-07;2!CL:0000792;1.46e-07;2!CL:0002677;1.46e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.06e-42,18;CL:0000789,1.06e-42,18;CL:0002420,1.06e-42,18;CL:0002419,1.06e-42,18;CL:0000790,1.06e-42,18;CL:0000084,2.11e-37,25;CL:0000827,2.11e-37,25;CL:0000625,2.96e-27,11;CL:0000838,4.99e-24,52;CL:0000542,1.84e-23,53;CL:0000051,1.84e-23,53;CL:0000624,5.71e-20,6;CL:0002087,9.76e-13,115;CL:0000738,1.00e-12,136;CL:0000037,1.87e-12,168;CL:0000988,2.08e-11,177;CL:0000898,1.01e-10,3;CL:0000226,4.76e-10,3;CL:0000842,4.76e-10,3;CL:0000623,5.23e-10,3;CL:0000825,5.23e-10,3;CL:0002032,1.65e-09,161;CL:0000837,1.65e-09,161;CL:0002031,7.70e-09,120;CL:0000815,1.56e-07,2;CL:0000792,1.56e-07,2;CL:0002677,1.56e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.12e-42;18!CL:0000051;1.05e-11;53 | |||
|ontology_enrichment_disease=DOID:1036!4.83e-10!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.90e-09!15;UBERON:0000179!1.90e-09!15;UBERON:0000463!1.90e-09!15;UBERON:0002390!1.14e-08!102;UBERON:0003061!1.14e-08!102;UBERON:0002193!2.07e-08!112;UBERON:0004177!9.74e-08!7;UBERON:0002370!8.59e-07!4;UBERON:0005058!8.59e-07!4;UBERON:0009113!8.59e-07!4;UBERON:0003295!8.59e-07!4;UBERON:0005562!8.59e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.06e-18;15!UBERON:0000179;4.06e-18;15!UBERON:0000463;4.06e-18;15!UBERON:0002390;6.85e-14;32!UBERON:0002193;2.72e-09;42!UBERON:0002370;7.21e-07;2!UBERON:0005058;7.21e-07;2!UBERON:0009113;7.21e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.91e-18,15;UBERON:0000179,3.91e-18,15;UBERON:0000463,3.91e-18,15;UBERON:0002370,1.16e-07,4;UBERON:0005058,1.16e-07,4;UBERON:0009113,1.16e-07,4;UBERON:0003295,1.16e-07,4;UBERON:0005562,1.16e-07,4;UBERON:0004177,3.41e-07,7;UBERON:0005057,3.41e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,2.30297638858328,0.309632246632152,0,0,0,0.0774672005803016,0.426507697462265,3.52320527201817,1.10799081706375,0.802177789880567,1.08505435357926,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641858054152187,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0,0,0,0,0,0,7.93027971474155,1.12101712596307,0.526768169550154,15.343362068879,13.3623659334716,6.16804496998528,23.5732958500856,4.23698946623668,7.101717086021,11.6896037044747,3.7879555340959,10.0166008541445,9.08288967792847,11.3737622781307,6.14838334683241,9.23421367675135,6.9063919933544,6.35605040907451,13.0411388580774,7.8591878475892,4.54819407752512,3.1360657141493,5.21222976408804,13.4127172760672,17.5249997196141,21.2536541296382,6.37130828648194,3.90650072313851,0.950452044448374,2.40920190524436,5.11946444617674,9.99445812418767,6.86654030927649,5.74789597844733,8.0642697289893,5.61624411145365,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.870648686496336,0.664789802594326,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,5.51686128565396,4.52817907204986,3.7219480521127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34212854858063,6.68714022537712,3.09509917629989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.53723804616085,0,5.12682468456746,2.1440859791201,3.70226045777575,2.59389324477087,1.62009431171434,2.37937552888281,0,0,0,0.371606350251437,0,0,5.7393458182376,1.59663497146253,2.10655907145603,0,0,0.280797178113459,0,0,0,2.37008488922245,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,2.48655523978033,0,0,3.81562896929315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.384751292518985,0,0,0,0,0,0,0,1.02193298195737,0.941881538370149,0.166211681900156,0.225595660617181,0.19606253431774,0.335643173951685,0.75901493089674,0.476809736941136,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0.218559560503957,0,0,0,0,0,0,0,1.69171052363736,0.515663103788617,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77957932786445,1.42771842880473,0,0,0.202117188958219,0,0.342233301085281,1.54909721933551,0.78894425931944,0.332660356546013,0,0,0,0,0,0,0,0,1.40891655513718,0.320568492303233 | |||
|short_description=p17@MBNL1 | |||
}} |
Latest revision as of 01:53, 16 September 2015
Short description: | p17@MBNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_MBNL1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -104bp_to_ENST00000477171_5end |
EntrezGene: | MBNL1 |
HGNC: | 6923 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.06e-42 | 18 |
alpha-beta T cell | 1.06e-42 | 18 |
immature T cell | 1.06e-42 | 18 |
mature T cell | 1.06e-42 | 18 |
immature alpha-beta T cell | 1.06e-42 | 18 |
T cell | 2.11e-37 | 25 |
pro-T cell | 2.11e-37 | 25 |
CD8-positive, alpha-beta T cell | 2.96e-27 | 11 |
lymphoid lineage restricted progenitor cell | 4.99e-24 | 52 |
lymphocyte | 1.84e-23 | 53 |
common lymphoid progenitor | 1.84e-23 | 53 |
CD4-positive, alpha-beta T cell | 5.71e-20 | 6 |
nongranular leukocyte | 9.76e-13 | 115 |
leukocyte | 1.00e-12 | 136 |
hematopoietic stem cell | 1.87e-12 | 168 |
hematopoietic cell | 2.08e-11 | 177 |
naive T cell | 1.01e-10 | 3 |
single nucleate cell | 4.76e-10 | 3 |
mononuclear cell | 4.76e-10 | 3 |
natural killer cell | 5.23e-10 | 3 |
pro-NK cell | 5.23e-10 | 3 |
hematopoietic oligopotent progenitor cell | 1.65e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.65e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 7.70e-09 | 120 |
regulatory T cell | 1.56e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.56e-07 | 2 |
naive regulatory T cell | 1.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.91e-18 | 15 |
haemolymphatic fluid | 3.91e-18 | 15 |
organism substance | 3.91e-18 | 15 |
thymus | 1.16e-07 | 4 |
hemolymphoid system gland | 1.16e-07 | 4 |
thymic region | 1.16e-07 | 4 |
pharyngeal gland | 1.16e-07 | 4 |
thymus primordium | 1.16e-07 | 4 |
hemopoietic organ | 3.41e-07 | 7 |
immune organ | 3.41e-07 | 7 |