FFCP PHASE1:Mm9::chr13:41013895..41013907,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=46|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:41013895..41013907,+|id=chr13:41013895..41013907,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000682,3.93e-19,3;CL:0000239,7.99e-16,6;CL:0000677,7.99e-16,6;CL:0000584,7.99e-16,6;CL:0000075,1.32e-13,7;CL:0000066,3.83e-11,25;CL:0002563,1.22e-10,9;CL:0002251,1.22e-10,9;CL:0000473,1.63e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003975!8.48e-08!5;UBERON:0004175!3.16e-07!9;UBERON:0004923!3.77e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.33e-19,15;UBERON:0004923,4.01e-15,24;UBERON:0001962,3.67e-13,2;UBERON:0001961,3.67e-13,2;UBERON:0001744,3.67e-13,2;UBERON:0001242,3.24e-11,13;UBERON:0001262,3.24e-11,13;UBERON:0004786,3.24e-11,13;UBERON:0003350,1.22e-10,9;UBERON:0004808,1.22e-10,9;UBERON:0001277,1.22e-10,9;UBERON:0002465,4.51e-09,3;UBERON:0000485,9.62e-09,11;UBERON:0000305,1.20e-07,1;UBERON:0003199,2.79e-07,1|phase1_expression=0,1.74487703819681,1.36499771816861,0,0,2.35030980676646,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,6.87967418011649,3.21172993494038,5.16808767703518,4.73838195774982,7.11055067863434,0.190023419456374,0,2.43903561720835,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,26.2026665798436,0,0,0,0.220841518460394,0,0,0,0,0,0.359445373517761,0,0,0,0.457500602818626,0.125654352112864,0,0,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,1.18984900995699,1.25956307091292,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,2.01466786693992,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p@chr13:41013895..41013907,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:41013895..41013907,+ | |||
|description=CAGE_peak_at_chr13:41013895..41013907,+ | |||
|id=chr13:41013895..41013907,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.93e-19,3;CL:0000239,7.99e-16,6;CL:0000677,7.99e-16,6;CL:0000584,7.99e-16,6;CL:0000075,1.32e-13,7;CL:0000066,3.83e-11,25;CL:0002563,1.22e-10,9;CL:0002251,1.22e-10,9;CL:0000473,1.63e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003975!8.48e-08!5;UBERON:0004175!3.16e-07!9;UBERON:0004923!3.77e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.33e-19,15;UBERON:0004923,4.01e-15,24;UBERON:0001962,3.67e-13,2;UBERON:0001961,3.67e-13,2;UBERON:0001744,3.67e-13,2;UBERON:0001242,3.24e-11,13;UBERON:0001262,3.24e-11,13;UBERON:0004786,3.24e-11,13;UBERON:0003350,1.22e-10,9;UBERON:0004808,1.22e-10,9;UBERON:0001277,1.22e-10,9;UBERON:0002465,4.51e-09,3;UBERON:0000485,9.62e-09,11;UBERON:0000305,1.20e-07,1;UBERON:0003199,2.79e-07,1 | |||
|phase1_expression=0,1.74487703819681,1.36499771816861,0,0,2.35030980676646,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,6.87967418011649,3.21172993494038,5.16808767703518,4.73838195774982,7.11055067863434,0.190023419456374,0,2.43903561720835,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,26.2026665798436,0,0,0,0.220841518460394,0,0,0,0,0,0.359445373517761,0,0,0,0.457500602818626,0.125654352112864,0,0,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,1.18984900995699,1.25956307091292,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,2.01466786693992,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr13:41013895..41013907,+ | |||
}} |
Latest revision as of 23:27, 5 August 2015
Short description: | p@chr13:41013895..41013907, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:41013895..41013907, + |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.93e-19 | 3 |
brush border epithelial cell | 7.99e-16 | 6 |
gut absorptive cell | 7.99e-16 | 6 |
enterocyte | 7.99e-16 | 6 |
columnar/cuboidal epithelial cell | 1.32e-13 | 7 |
epithelial cell | 3.83e-11 | 25 |
intestinal epithelial cell | 1.22e-10 | 9 |
epithelial cell of alimentary canal | 1.22e-10 | 9 |
defensive cell | 1.63e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.33e-19 | 15 |
organ component layer | 4.01e-15 | 24 |
gut-associated lymphoid tissue | 3.67e-13 | 2 |
mucosa-associated lymphoid tissue | 3.67e-13 | 2 |
lymphoid tissue | 3.67e-13 | 2 |
intestinal mucosa | 3.24e-11 | 13 |
wall of intestine | 3.24e-11 | 13 |
gastrointestinal system mucosa | 3.24e-11 | 13 |
epithelium of mucosa | 1.22e-10 | 9 |
gastrointestinal system epithelium | 1.22e-10 | 9 |
intestinal epithelium | 1.22e-10 | 9 |
lymphoid system | 4.51e-09 | 3 |
simple columnar epithelium | 9.62e-09 | 11 |
amnion | 1.20e-07 | 1 |
egg chamber | 2.79e-07 | 1 |