FFCP PHASE1:Hg19::chr3:5020582..5020599,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1046 | |||
|TSSclassifier=strong | |||
|UniProt=O14503 | |||
|association_with_transcript=-201bp_to_ENST00000256495_5end | |||
|cluster_id=chr3:5020582..5020599,+ | |||
|coexpression_cluster_id=C1366 | |||
|description=CAGE_peak_10_at_BHLHE40_5end | |||
|id=chr3:5020582..5020599,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.52e-19!42;CL:0000860!3.66e-19!45;CL:0000766!9.08e-14!76;CL:0000763!1.03e-13!112;CL:0000049!1.03e-13!112;CL:0000037!1.28e-11!172;CL:0000566!1.28e-11!172;CL:0000738!5.62e-11!140;CL:0000557!6.61e-11!71;CL:0000988!9.78e-11!182;CL:0002032!2.48e-10!165;CL:0000837!2.48e-10!165;CL:0002009!4.66e-10!65;CL:0000839!8.93e-10!70;CL:0002194!2.25e-09!63;CL:0000576!2.25e-09!63;CL:0000040!2.25e-09!63;CL:0000559!2.25e-09!63;CL:0002031!3.23e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.37e-21;33!CL:0002057;6.37e-21;33!CL:0000576;5.30e-15;48!CL:0000473;5.64e-15;39!CL:0000234;5.64e-15;39!CL:0000094;1.57e-14;8!CL:0000766;2.35e-13;69!CL:0000081;3.30e-10;11!CL:0002393;5.27e-10;6!CL:0002397;5.27e-10;6!CL:0000623;2.07e-08;3!CL:0000767;2.47e-08;3!CL:0000763;1.10e-07;100!CL:0002087;1.15e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.52e-32,72;CL:0000738,8.20e-30,136;CL:0000860,6.26e-28,42;CL:0002057,6.26e-28,42;CL:0000037,3.40e-26,168;CL:0000988,3.28e-25,177;CL:0000763,8.74e-25,108;CL:0000049,8.74e-25,108;CL:0002032,8.33e-24,161;CL:0000837,8.33e-24,161;CL:0000473,1.68e-23,48;CL:0000234,1.68e-23,48;CL:0000557,1.04e-22,67;CL:0000839,2.28e-21,66;CL:0002009,6.12e-20,61;CL:0002031,8.77e-20,120;CL:0002194,4.55e-19,59;CL:0000576,4.55e-19,59;CL:0000040,4.55e-19,59;CL:0000559,4.55e-19,59;CL:0002087,1.94e-18,115;CL:0000094,1.63e-14,8;CL:0000081,3.38e-10,11;CL:0000623,1.63e-08,3;CL:0000825,1.63e-08,3;CL:0000767,2.39e-08,3;CL:0002320,4.17e-08,361;CL:0000134,1.38e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.76e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.70e-08!86;UBERON:0002371!3.78e-08!80;UBERON:0002390!5.02e-07!102;UBERON:0003061!5.02e-07!102;UBERON:0004765!5.41e-07!101;UBERON:0001434!5.41e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.96e-19,76;UBERON:0001474,2.59e-18,82;UBERON:0004765,4.29e-17,90;UBERON:0002390,2.26e-15,98;UBERON:0003061,2.26e-15,98;UBERON:0001434,1.60e-14,100;UBERON:0002405,4.66e-14,93;UBERON:0002193,3.74e-13,108;UBERON:0002384,5.57e-08,371 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0.61560529038394,0,0.313454721478088,0.286235987131057,0.273748850145768,0.251085279189606,0.382067028739756,0.492603536699674,0.314843125254717,3.14691421479123,3.45446458287491,2.63187409637329,0,0.30120591877825,0,0,0,0.293600439334847,6.09394949385065,5.41470008169383,3.03815219002193,0,0,0,0.436194716338694,0.377875943688809,1.4555043671269,1.85943229524548,0,2.16794459626573,1.43846196161075,1.7931249457037,1.41889337933151,0.689491361473237,2.5819387343353,2.70852973188684,1.12945403725563,0.818718450173537,0.898893937780338,0.918251677112708,1.92557416245656,2.55734850319616,0.659702600373432,1.19678194572979,2.98357325372886,1.7412554317715,0.56738522469114,3.73693349397345,2.26123798731069,2.08593167368081,3.25783267057675,2.42159801053347,0.736555271975129,1.58231193720442,0.633765858935825,1.4882300997553,1.04829322754188,0.673971786878971,0.150176892841506,0.48217676009124,0.855038231223746,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,2.34894875748376,1.14681968437569,1.32171328579026,1.68152568894461,0.263384084775077,1.7703879310245,0.393010762749165,1.23360899399706,0,0,0,0,0.222820913770347,0,0.443067789167242,0,0.384273959177026,0.390178042679635,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0,0,3.42731463482045,1.60464117470104,0.724122019413995,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0.43917392846563,0.130979075497713,0,0,0,0,0,2.38490624305342,4.0039643754609,0.74291500265913,0,0,0,0,0.419499436209906,0,0.417989933073621,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0.949265659568129,0,9.22462922052443,3.87780264148325,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0,0.413303124703062,0,0.247266929278557,0.910161361938026,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0.0974370051611986,0.504867548488229,0,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0.473227200159376,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0.469634776943287,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.616339038092582,2.90259361757081,3.02651902175619,2.5248486685276,0,0,0,0,0,0.600686115687835,0.285826432630578,0.448524337381443,0,0.1466765716419,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,2.95546140302891,5.17506179662842,3.46526197955321,0.254094624222463,0,0,0,0,2.24702107184155,0,1.24324654030811,0,1.00034104211935,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0,0.0868836144680828,0.391602314925481,1.02943027143257,0.206768026122887,3.66714141391649,2.34800627167578,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0.232420756919918,0.241718899183244,0,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.316654886678627,0,0.510281115829547,0.647747748306418,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0.325378394664303,0,0.457847324091717,0.41254749960294,0,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0,0.145016693914229,0,0.178064071293475,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,1.56989728039846,0,0,0.117812402345686,0,0,0.421258456238981,0,0,1.05650146756755,0,0.282810863907425,0,0.551365343546124,0,0.438450885253763,0,0.655894752046633,0,0,0.563391205064483,0.286822704408103,0.196498082026242,0,0,0.422215270595328,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0.213648142254946,0,1.47024129588619,0,0,0,0,0.399158742865633,0.191505370132367,0.211673582723883,0,0,0.456469358066384,0,0,0.169291777801603,1.2847046008296,1.21079824314629,0.851692475380653,0.343505344755765,0.307240764308458,0,0.333698283423817,0.19538809540204,0,1.23087398947712,0.540911356951966,0.66614393599564,0,0.561421621224659,0,0,0.891547074219827,0.568272293612826,0.71623345421307,0,0.307160702099232,0.994147647766298,0.984685914873589,0.222617410045812,0,0,0.597743964753209,0.276283915531148,0.251932747854276,0.102268682502155,0.369254416383208,0,0.539210106883961,0.895105873378046,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.520855522170466,3.14855999986305,0,0.227586896570999,2.2882828526349,0.472775363535873,0,0,0.347249989866585,0,0.60298219312704,0,1.10579259931225,0.591095237907095,0.219385397153973,0.108938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| |||
|short_description=p10@BHLHE40 | |||
}} |
Latest revision as of 18:25, 18 September 2015
Short description: | p10@BHLHE40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_BHLHE40_5end |
Coexpression cluster: | C1366_Eosinophils_CD14_immature_Natural_CD34_CD8_Mast |
Association with transcript: | -201bp_to_ENST00000256495_5end |
EntrezGene: | BHLHE40 |
HGNC: | 1046 |
UniProt: | O14503 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.52e-32 | 72 |
leukocyte | 8.20e-30 | 136 |
classical monocyte | 6.26e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.26e-28 | 42 |
hematopoietic stem cell | 3.40e-26 | 168 |
hematopoietic cell | 3.28e-25 | 177 |
myeloid cell | 8.74e-25 | 108 |
common myeloid progenitor | 8.74e-25 | 108 |
hematopoietic oligopotent progenitor cell | 8.33e-24 | 161 |
hematopoietic multipotent progenitor cell | 8.33e-24 | 161 |
defensive cell | 1.68e-23 | 48 |
phagocyte | 1.68e-23 | 48 |
granulocyte monocyte progenitor cell | 1.04e-22 | 67 |
myeloid lineage restricted progenitor cell | 2.28e-21 | 66 |
macrophage dendritic cell progenitor | 6.12e-20 | 61 |
hematopoietic lineage restricted progenitor cell | 8.77e-20 | 120 |
monopoietic cell | 4.55e-19 | 59 |
monocyte | 4.55e-19 | 59 |
monoblast | 4.55e-19 | 59 |
promonocyte | 4.55e-19 | 59 |
nongranular leukocyte | 1.94e-18 | 115 |
granulocyte | 1.63e-14 | 8 |
blood cell | 3.38e-10 | 11 |
natural killer cell | 1.63e-08 | 3 |
pro-NK cell | 1.63e-08 | 3 |
basophil | 2.39e-08 | 3 |
connective tissue cell | 4.17e-08 | 361 |
mesenchymal cell | 1.38e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.96e-19 | 76 |
bone element | 2.59e-18 | 82 |
skeletal element | 4.29e-17 | 90 |
hematopoietic system | 2.26e-15 | 98 |
blood island | 2.26e-15 | 98 |
skeletal system | 1.60e-14 | 100 |
immune system | 4.66e-14 | 93 |
hemolymphoid system | 3.74e-13 | 108 |
connective tissue | 5.57e-08 | 371 |