FFCP PHASE1:Mm9::chr15:100467284..100467331,-: Difference between revisions
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{{FFCP|EntrezGene=207818|HGNC=|MCL_coexpression_id=2705|UniProt=Q99KC7|association_with_transcript=0bp_to_ENSMUST00000066068,ENSMUST00000172334,NM_001033872,NM_174992,uc007xru.1,uc007xrv.1_5end|description=CAGE_peak_2_at_Smagp_5end|id=chr15:100467284..100467331,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!6.70e-17!66;UBERON:0005177!1.77e-14!85;UBERON:0004119!6.74e-13!130;UBERON:0000925!6.74e-13!130;UBERON:0006595!6.74e-13!130;UBERON:0005172!9.74e-13!49;UBERON:0005173!9.74e-13!49;UBERON:0002417!9.74e-13!49;UBERON:0000916!9.74e-13!49;UBERON:0000466!3.18e-12!79;UBERON:0001007!5.73e-12!128;UBERON:0001555!5.73e-12!128;UBERON:0007026!5.73e-12!128;UBERON:0004921!2.62e-11!126;UBERON:0004185!2.62e-11!126;UBERON:0002100!7.36e-11!98;UBERON:0000926!1.25e-09!193;UBERON:0004120!1.25e-09!193;UBERON:0006603!1.25e-09!193;UBERON:0002365!1.89e-09!25;UBERON:0002330!1.89e-09!25;UBERON:0002107!6.79e-09!22;UBERON:0007499!6.79e-09!22;UBERON:0006925!6.79e-09!22;UBERON:0009497!6.79e-09!22;UBERON:0000015!6.79e-09!22;UBERON:0002423!6.79e-09!22;UBERON:0006235!6.79e-09!22;UBERON:0008835!6.79e-09!22;UBERON:0003894!6.79e-09!22;UBERON:0004161!6.79e-09!22;UBERON:0008836!6.79e-09!22;UBERON:0009854!1.23e-08!23;UBERON:0009856!1.23e-08!23;UBERON:0005409!1.23e-08!59;UBERON:0003914!1.37e-07!47;UBERON:0000160!1.99e-07!43;UBERON:0003104!8.60e-07!131;UBERON:0009142!8.60e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.07e-18,79;UBERON:0009569,3.31e-17,66;UBERON:0002100,1.80e-14,90;UBERON:0005172,5.83e-13,49;UBERON:0005173,5.83e-13,49;UBERON:0002417,5.83e-13,49;UBERON:0000916,5.83e-13,49;UBERON:0004119,1.83e-12,118;UBERON:0000925,1.83e-12,118;UBERON:0006595,1.83e-12,118;UBERON:0001007,1.56e-11,116;UBERON:0001555,1.56e-11,116;UBERON:0007026,1.56e-11,116;UBERON:0004921,7.09e-11,114;UBERON:0002365,1.32e-09,25;UBERON:0002330,1.32e-09,25;UBERON:0002107,4.85e-09,22;UBERON:0007499,4.85e-09,22;UBERON:0006925,4.85e-09,22;UBERON:0009497,4.85e-09,22;UBERON:0000015,4.85e-09,22;UBERON:0002423,4.85e-09,22;UBERON:0006235,4.85e-09,22;UBERON:0008835,4.85e-09,22;UBERON:0003894,4.85e-09,22;UBERON:0004161,4.85e-09,22;UBERON:0008836,4.85e-09,22;UBERON:0003104,7.03e-09,61;UBERON:0009142,7.03e-09,61;UBERON:0009854,8.86e-09,23;UBERON:0009856,8.86e-09,23;UBERON:0005409,6.50e-08,47;UBERON:0003914,6.70e-08,47;UBERON:0006554,5.09e-07,18;UBERON:0001008,5.88e-07,19;UBERON:0005256,5.90e-07,45;UBERON:0000160,7.12e-07,31|phase1_expression=1.92178616525753,10.1202868215415,14.1049764210756,6.0492842261366,7.01254021924886,7.21880869221126,7.47560449905682,0.129123323441576,0,0,0,0,0.171200729931206,0,8.66085380720723,3.23960427823721,2.09868563438444,3.15462165358238,3.83920414096069,5.94145512517242,7.39876624314307,1.78723712161594,0.783599367416806,7.99962113967033,10.3234176480227,7.46501553349526,9.47676391549965,8.40337807474967,7.60093677825496,5.79669298447841,10.6430645114546,1.27006134691926,0.61506478758457,0,5.77703239502549,8.31173226792462,6.53341940039581,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0,0.439372365468944,0.388859798148567,0.139986421625363,0,5.36904339384756,0,0,2.82985379639542,3.15186783932632,4.64104883049698,0.606949382578793,0.528990979272033,1.26766280701236,0,0,66.1426292201828,45.4878526780808,65.3641705750412,23.9680088414724,18.8266969607562,0.622137673850866,0.270011876663381,1.47227472945967,1.42825492201902,0.220868540951614,0.489963196859816,0,0.919218786610021,0,0.638436690425939,0.614426133024974,0,0.640413505216868,1.04182674111352,0,1.12552522006336,0.763991238884051,0.589257170947335,0.711858403995515,0.372798891650601,0.302904773332736,0.302286240427142,35.943196599008,36.9982267101996,11.5595126730318,25.3660500069774,19.4932925234301,8.06448396775204,8.00533194750986,0,0,0,4.64783285263046,0,0,0,4.5463118612355,6.08063677140237,8.08839112023653,11.418387971906,6.99132285847364,9.94562331734326,2.08182392119363,2.74018930480927,3.92046345335299,6.48107354376277,5.64425794251383,10.053327306374,10.8765785803125,9.25435884287435,1.76922110389975,5.17653919831709,5.30019644304944,4.84875253135222,3.72783522436244,0.585561594023094,0.209446706813455,7.66371165625774,0.239630249011841,1.19980546198682,0.127070227073065,0.299581278809645,0.457500602818626,0.879580464790051,0.695297280769106,0,0.62336413367868,0.486723789203273,6.51771928642024,10.8234064430781,28.0522261861379,8.62811609134543,0.520481771850815,0.459804208866946,1.26043490863744,2.41127708537144,1.42876648217788,1.2811372028485,1.68663104207512,3.10444044886819,0.215567992932842,0.756424320671277,0.351902248327898,2.84954452155847,0.278047249225598,2.78601733217733,3.70407845534298,2.58744546864041,0,0.257347907114715,0,2.69263504296152,2.34526059981096,3.78130329068131,3.07768156260773,2.55793501271625,3.85667782218446,5.34828072925938,4.82892122519315,6.30532848782715,5.43047504714485,7.22336841948019,8.998637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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=207818 | |||
|HGNC= | |||
|MCL_coexpression_id=2705 | |||
|TSSclassifier=NA | |||
|UniProt=Q99KC7 | |||
|association_with_transcript=0bp_to_ENSMUST00000066068,ENSMUST00000172334,NM_001033872,NM_174992,uc007xru.1,uc007xrv.1_5end | |||
|cluster_id=chr15:100467284..100467331,- | |||
|description=CAGE_peak_2_at_Smagp_5end | |||
|id=chr15:100467284..100467331,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!6.70e-17!66;UBERON:0005177!1.77e-14!85;UBERON:0004119!6.74e-13!130;UBERON:0000925!6.74e-13!130;UBERON:0006595!6.74e-13!130;UBERON:0005172!9.74e-13!49;UBERON:0005173!9.74e-13!49;UBERON:0002417!9.74e-13!49;UBERON:0000916!9.74e-13!49;UBERON:0000466!3.18e-12!79;UBERON:0001007!5.73e-12!128;UBERON:0001555!5.73e-12!128;UBERON:0007026!5.73e-12!128;UBERON:0004921!2.62e-11!126;UBERON:0004185!2.62e-11!126;UBERON:0002100!7.36e-11!98;UBERON:0000926!1.25e-09!193;UBERON:0004120!1.25e-09!193;UBERON:0006603!1.25e-09!193;UBERON:0002365!1.89e-09!25;UBERON:0002330!1.89e-09!25;UBERON:0002107!6.79e-09!22;UBERON:0007499!6.79e-09!22;UBERON:0006925!6.79e-09!22;UBERON:0009497!6.79e-09!22;UBERON:0000015!6.79e-09!22;UBERON:0002423!6.79e-09!22;UBERON:0006235!6.79e-09!22;UBERON:0008835!6.79e-09!22;UBERON:0003894!6.79e-09!22;UBERON:0004161!6.79e-09!22;UBERON:0008836!6.79e-09!22;UBERON:0009854!1.23e-08!23;UBERON:0009856!1.23e-08!23;UBERON:0005409!1.23e-08!59;UBERON:0003914!1.37e-07!47;UBERON:0000160!1.99e-07!43;UBERON:0003104!8.60e-07!131;UBERON:0009142!8.60e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.07e-18,79;UBERON:0009569,3.31e-17,66;UBERON:0002100,1.80e-14,90;UBERON:0005172,5.83e-13,49;UBERON:0005173,5.83e-13,49;UBERON:0002417,5.83e-13,49;UBERON:0000916,5.83e-13,49;UBERON:0004119,1.83e-12,118;UBERON:0000925,1.83e-12,118;UBERON:0006595,1.83e-12,118;UBERON:0001007,1.56e-11,116;UBERON:0001555,1.56e-11,116;UBERON:0007026,1.56e-11,116;UBERON:0004921,7.09e-11,114;UBERON:0002365,1.32e-09,25;UBERON:0002330,1.32e-09,25;UBERON:0002107,4.85e-09,22;UBERON:0007499,4.85e-09,22;UBERON:0006925,4.85e-09,22;UBERON:0009497,4.85e-09,22;UBERON:0000015,4.85e-09,22;UBERON:0002423,4.85e-09,22;UBERON:0006235,4.85e-09,22;UBERON:0008835,4.85e-09,22;UBERON:0003894,4.85e-09,22;UBERON:0004161,4.85e-09,22;UBERON:0008836,4.85e-09,22;UBERON:0003104,7.03e-09,61;UBERON:0009142,7.03e-09,61;UBERON:0009854,8.86e-09,23;UBERON:0009856,8.86e-09,23;UBERON:0005409,6.50e-08,47;UBERON:0003914,6.70e-08,47;UBERON:0006554,5.09e-07,18;UBERON:0001008,5.88e-07,19;UBERON:0005256,5.90e-07,45;UBERON:0000160,7.12e-07,31 | |||
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| |||
|short_description=p2@Smagp | |||
}} |
Latest revision as of 12:19, 26 September 2015
Short description: | p2@Smagp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Smagp_5end |
Coexpression cluster: | MCL_coexpression_mm9:2705 |
Association with transcript: | 0bp_to_ENSMUST00000066068, ENSMUST00000172334, NM_001033872, NM_174992, uc007xru.1, uc007xrv.1_5end |
EntrezGene: | Smagp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data