FFCP PHASE1:Mm9::chr16:18426695..18426712,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12846|HGNC=|UniProt=Q91XH4|association_with_transcript=96bp_to_NM_001111062,NM_007744,uc007ynu.2,uc007ynv.2_5end|description=CAGE_peak_7_at_Comt_5end|id=chr16:18426695..18426712,-|ontology_enrichment_celltype=CL:0000055!5.67e-08!50|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!1.04e-17!114;UBERON:0004111!3.69e-16!122;UBERON:0003914!3.10e-14!47;UBERON:0000477!8.80e-10!154;UBERON:0002107!4.26e-08!22;UBERON:0007499!4.26e-08!22;UBERON:0006925!4.26e-08!22;UBERON:0009497!4.26e-08!22;UBERON:0000015!4.26e-08!22;UBERON:0002423!4.26e-08!22;UBERON:0006235!4.26e-08!22;UBERON:0008835!4.26e-08!22;UBERON:0003894!4.26e-08!22;UBERON:0004161!4.26e-08!22;UBERON:0008836!4.26e-08!22;UBERON:0007100!4.55e-08!18;UBERON:0000948!4.55e-08!18;UBERON:0005498!4.55e-08!18;UBERON:0004140!4.55e-08!18;UBERON:0009881!4.55e-08!18;UBERON:0004141!4.55e-08!18;UBERON:0003084!4.55e-08!18;UBERON:0007005!4.55e-08!18;UBERON:0004139!4.55e-08!18;UBERON:0004291!4.55e-08!18;UBERON:0004535!3.48e-07!23;UBERON:0001009!3.48e-07!23;UBERON:0009854!5.07e-07!23;UBERON:0009856!5.07e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000025,9.96e-18,114;UBERON:0004111,3.56e-16,122;UBERON:0003914,2.93e-14,47;UBERON:0002107,4.14e-08,22;UBERON:0007499,4.14e-08,22;UBERON:0006925,4.14e-08,22;UBERON:0009497,4.14e-08,22;UBERON:0000015,4.14e-08,22;UBERON:0002423,4.14e-08,22;UBERON:0006235,4.14e-08,22;UBERON:0008835,4.14e-08,22;UBERON:0003894,4.14e-08,22;UBERON:0004161,4.14e-08,22;UBERON:0008836,4.14e-08,22;UBERON:0007100,4.42e-08,18;UBERON:0000948,4.42e-08,18;UBERON:0005498,4.42e-08,18;UBERON:0004140,4.42e-08,18;UBERON:0009881,4.42e-08,18;UBERON:0004141,4.42e-08,18;UBERON:0003084,4.42e-08,18;UBERON:0007005,4.42e-08,18;UBERON:0004139,4.42e-08,18;UBERON:0004291,4.42e-08,18;UBERON:0010314,1.02e-07,92;UBERON:0004535,3.40e-07,23;UBERON:0001009,3.40e-07,23;UBERON:0009854,4.22e-07,23;UBERON:0009856,4.22e-07,23|phase1_expression=2.5623815536767,0.697950815278722,0.454999239389536,0.90739263392049,2.00358291978539,1.34303417529512,1.63528848416868,0,0,0.234064526321993,0.171217968225505,0.638177271962691,0,0.262261207256992,2.6648780945253,1.01237633694913,4.89693314689703,0.473193248037357,0.685572168028694,0,1.9559956734746,1.48936426801328,1.04479915655574,2.07990149631429,1.60586496747019,1.14846392823004,0.86152399231815,0.861884930743556,1.33016393619462,0.756090389279792,1.33038306393183,5.08024538767705,1.84519436275371,0,1.44425809875637,1.66234645358492,1.02084678131185,0,0,0,0,0,0,3.39921408534059,3.85232338634155,2.38610777810186,5.47673941043627,4.57852828398938,3.95435128922049,3.69416808241138,2.51975558925653,8.62515386189829,0.167782606057736,0,0,4.88792928468299,5.15760191889762,9.28209766099396,3.64169629547276,4.23192783417626,2.53532561402472,4.06613438482959,3.55717918444456,4.04954872776629,0.988866362566974,3.5524005747305,4.79360176829448,7.30014780110954,4.35496371695606,4.59020190327748,5.04779907243317,4.57041575046086,4.41737081903227,2.20483438586917,2.87536413054709,8.27296907949019,2.20231761998777,2.55374676170375,3.07213066512487,4.2203612073662,3.65950574409639,1.04182674111352,3.90856198601933,2.25105044012672,2.75036845998258,5.00868595305235,4.6982654663704,5.40558392893372,3.55913108665965,2.87171928405785,1.44932244350839,12.9063581547208,6.11974200336975,9.71465744948071,12.9955283489534,8.96053774194671,4.35377702408431,6.13549161281008,5.19572009205738,5.3000936176551,2.39433813620357,6.41632387071589,2.54805239706646,7.11066703153331,2.81438353314578,2.78695852022608,3.0331466700887,2.2836775943812,0.776813650941515,5.64080128446334,3.46970653532272,2.74018930480927,2.53677046981664,3.61734337326294,2.58695155698551,5.15233024451669,1.23597483867187,4.19338135067744,1.76922110389975,3.07357014900077,1.98757366614354,1.45462575940567,0,4.39171195517321,2.72280718857492,2.29911349687732,0.958520996047362,0.599902730993408,1.01656181658452,3.74476598512057,3.66000482254901,2.63874139437015,2.9550134432687,2.55715457330331,3.94797284663164,2.10913641988085,3.66621709861139,1.8661045591514,2.52722758433675,0.841767423545896,1.82168620147785,1.83921683546778,2.52086981727489,4.21973489940002,2.10913147369116,1.92170580427275,3.09215691047105,1.81092359517311,2.37124792226126,2.08016688184601,4.92663147659057,1.7535658594206,2.50242524303038,1.74126083261083,2.26360350048738,3.78165106955137,2.80885274925294,1.28673953557358,1.13665399758237,4.76389276831654,5.62862543954631,5.04173772090842,6.62885259638589,4.9191057936851,3.5481435964097,5.34828072925938,4.29237442239391,3.38619492864792,4.93679549740441,4.43252153013557,4.13450928683864,6.14039947186396,4.61055242111206,3.75777972529041,3.78521907415429,5.9684675179985,0.330418782983798,0.528901133327089,2.13288250535234,2.55460339046482,3.47942145569652,2.01683524623343,2.89091456998331,2.66315876557583,1.89811624617805,1.97638745668813,2.76468729680296,1.98956472041151,3.8992817423824,1.79763881730844,0.864552199498777,1.1948476395262,3.41402221715547,2.74196430263349,2.25415471346161,4.2766778847516,4.46090720485539,2.52488951605147,3.41477300470989,1.18088118383682,1.8839847340965,1.97435462274881,10.6722945751374,3.50374722003798,4.52085688760367,4.94696647246678,3.04290182082754,2.65294875727659,5.0925170356284,4.31544206176216,1.45921704097532,3.84385978463314,8.62609239164127,8.55924179637558,7.17686648163489,8.84026072814891,8.25228102200796,5.78932225636041,2.40179147216586,2.4633883530163,5.21487924614483,3.05541154395339,4.69380496577004,3.01511263395268,4.52282917683426,1.56106918286239,3.62560831444239,4.65075848262427,3.50800491046472,3.27726629431476,2.76295970985433,2.31438493730419,3.01582567878545,1.08781136763742,1.96705709207614,1.37968373152366,1.9266070798535,1.17211686592203,2.78689407140348,2.01976741763498,0.94652465824877,3.90438744296638,3.23135096599198,4.77937595905104,5.12436950389506,3.39691836946599,4.04810701674894,4.09158201075837,2.76701444562566,2.24924921495265,2.6968616189571,3.20518086601059,3.4206261464251,2.3095817216155,1.32745138339963,3.39892890616974,2.41858845571801,2.07465587731488,3.2483208216885,2.45948118355142,1.29214146584111,1.81766864738753,2.85197902707777,1.58018378967908,0,2.06271086496374,3.40439605753788,2.70091641046965,4.13947788104814,1.92903331528433,2.48276327099183,3.38900753443934,2.13913726782757,2.74018454203139,1.64270195644597,1.0591603543191,4.6310963591542,0.8244312647074,3.39075296061402,2.47282992205439,2.38744688006273,1.31312719796049,1.7488850197791,4.07935664423121,3.07567585436135,3.714963623338,2.96311243791539,3.20226376907975,3.2806614653046,2.74533807847827,0.339956859987711,1.11961161858926,1.38199973804424,2.86401185404534,2.68885594543965,3.45643094115643,2.48412283890143,3.55450103224597,1.9652630737156,2.42755823492677,3.05817786183743,1.83229159388821,1.68499465279331,1.24267862617385,0.56369293868419,2.99033092087958,1.48912641411388,2.52786544847262,3.87479470433193,3.71703476079712,3.63807439801837,4.03633593016245,2.30690557736564,0.483168241652012,0.576060012515731,1.26404448251271,5.0681303822541,5.13554785824136,2.5984164595559,3.75956060901711,1.39076948346885,1.9231271923195,1.47689527174577,0.605798699688886,1.447929326445,0.806609481094724,1.07203668813728,0.384847366561318,0.818138315270983,1.81384306892169,1.55390167361845,1.25599399253266,0.839423081820392,3.86379188064381,3.94133198447482,4.39563898241436,1.2862102744744,1.50471631210609,6.7770221114048,4.14292712856459,4.01026859407578,1.71853182343688,4.11049511862385,0,2.02506750069542,3.15224842256954,0.906284817968409,4.14208249401456,1.3492355185943,4.38927360741134,2.73173769206615,3.64660075602441,2.09613162627982,1.65459157605013,4.22268782823069,3.7086310303001,3.20919209591815,4.04315538822076,2.5347929989024,3.77252682772152,1.87283014939765,3.3293079250532,2.69946704091382,2.38146845641537,3.70829843023538,1.73618298417335,2.88460130562315,3.53277408322554,4.4573002810104,4.2594193478241,3.57654284920981,2.32554266611726,2.4468438907986,2.876896668317,3.84148743032822,3.15683653725411,2.71608227691724,3.36685362994643,3.2031454893527,2.56111654176465,2.45538625901814,3.56354734727722,2.70069255373598,4.99621155875892,2.57324769289949,3.22306581072447,3.44318997723918,4.41182838239031,3.70988536992674|short_description=p7@Comt}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12846 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q91XH4 | |||
|association_with_transcript=96bp_to_NM_001111062,NM_007744,uc007ynu.2,uc007ynv.2_5end | |||
|cluster_id=chr16:18426695..18426712,- | |||
|description=CAGE_peak_7_at_Comt_5end | |||
|id=chr16:18426695..18426712,- | |||
|ontology_enrichment_celltype=CL:0000055!5.67e-08!50 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.04e-17!114;UBERON:0004111!3.69e-16!122;UBERON:0003914!3.10e-14!47;UBERON:0000477!8.80e-10!154;UBERON:0002107!4.26e-08!22;UBERON:0007499!4.26e-08!22;UBERON:0006925!4.26e-08!22;UBERON:0009497!4.26e-08!22;UBERON:0000015!4.26e-08!22;UBERON:0002423!4.26e-08!22;UBERON:0006235!4.26e-08!22;UBERON:0008835!4.26e-08!22;UBERON:0003894!4.26e-08!22;UBERON:0004161!4.26e-08!22;UBERON:0008836!4.26e-08!22;UBERON:0007100!4.55e-08!18;UBERON:0000948!4.55e-08!18;UBERON:0005498!4.55e-08!18;UBERON:0004140!4.55e-08!18;UBERON:0009881!4.55e-08!18;UBERON:0004141!4.55e-08!18;UBERON:0003084!4.55e-08!18;UBERON:0007005!4.55e-08!18;UBERON:0004139!4.55e-08!18;UBERON:0004291!4.55e-08!18;UBERON:0004535!3.48e-07!23;UBERON:0001009!3.48e-07!23;UBERON:0009854!5.07e-07!23;UBERON:0009856!5.07e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,9.96e-18,114;UBERON:0004111,3.56e-16,122;UBERON:0003914,2.93e-14,47;UBERON:0002107,4.14e-08,22;UBERON:0007499,4.14e-08,22;UBERON:0006925,4.14e-08,22;UBERON:0009497,4.14e-08,22;UBERON:0000015,4.14e-08,22;UBERON:0002423,4.14e-08,22;UBERON:0006235,4.14e-08,22;UBERON:0008835,4.14e-08,22;UBERON:0003894,4.14e-08,22;UBERON:0004161,4.14e-08,22;UBERON:0008836,4.14e-08,22;UBERON:0007100,4.42e-08,18;UBERON:0000948,4.42e-08,18;UBERON:0005498,4.42e-08,18;UBERON:0004140,4.42e-08,18;UBERON:0009881,4.42e-08,18;UBERON:0004141,4.42e-08,18;UBERON:0003084,4.42e-08,18;UBERON:0007005,4.42e-08,18;UBERON:0004139,4.42e-08,18;UBERON:0004291,4.42e-08,18;UBERON:0010314,1.02e-07,92;UBERON:0004535,3.40e-07,23;UBERON:0001009,3.40e-07,23;UBERON:0009854,4.22e-07,23;UBERON:0009856,4.22e-07,23 | |||
|phase1_expression=2.5623815536767,0.697950815278722,0.454999239389536,0.90739263392049,2.00358291978539,1.34303417529512,1.63528848416868,0,0,0.234064526321993,0.171217968225505,0.638177271962691,0,0.262261207256992,2.6648780945253,1.01237633694913,4.89693314689703,0.473193248037357,0.685572168028694,0,1.9559956734746,1.48936426801328,1.04479915655574,2.07990149631429,1.60586496747019,1.14846392823004,0.86152399231815,0.861884930743556,1.33016393619462,0.756090389279792,1.33038306393183,5.08024538767705,1.84519436275371,0,1.44425809875637,1.66234645358492,1.02084678131185,0,0,0,0,0,0,3.39921408534059,3.85232338634155,2.38610777810186,5.47673941043627,4.57852828398938,3.95435128922049,3.69416808241138,2.51975558925653,8.62515386189829,0.167782606057736,0,0,4.88792928468299,5.15760191889762,9.28209766099396,3.64169629547276,4.23192783417626,2.53532561402472,4.06613438482959,3.55717918444456,4.04954872776629,0.988866362566974,3.5524005747305,4.79360176829448,7.30014780110954,4.35496371695606,4.59020190327748,5.04779907243317,4.57041575046086,4.41737081903227,2.20483438586917,2.87536413054709,8.27296907949019,2.20231761998777,2.55374676170375,3.07213066512487,4.2203612073662,3.65950574409639,1.04182674111352,3.90856198601933,2.25105044012672,2.75036845998258,5.00868595305235,4.6982654663704,5.40558392893372,3.55913108665965,2.87171928405785,1.44932244350839,12.9063581547208,6.11974200336975,9.71465744948071,12.9955283489534,8.96053774194671,4.35377702408431,6.13549161281008,5.19572009205738,5.3000936176551,2.39433813620357,6.41632387071589,2.54805239706646,7.11066703153331,2.81438353314578,2.78695852022608,3.0331466700887,2.2836775943812,0.776813650941515,5.64080128446334,3.46970653532272,2.74018930480927,2.53677046981664,3.61734337326294,2.58695155698551,5.15233024451669,1.23597483867187,4.19338135067744,1.76922110389975,3.07357014900077,1.98757366614354,1.45462575940567,0,4.39171195517321,2.72280718857492,2.29911349687732,0.958520996047362,0.599902730993408,1.01656181658452,3.74476598512057,3.66000482254901,2.63874139437015,2.9550134432687,2.55715457330331,3.94797284663164,2.10913641988085,3.66621709861139,1.8661045591514,2.52722758433675,0.841767423545896,1.82168620147785,1.83921683546778,2.52086981727489,4.21973489940002,2.10913147369116,1.92170580427275,3.09215691047105,1.81092359517311,2.37124792226126,2.08016688184601,4.92663147659057,1.7535658594206,2.50242524303038,1.74126083261083,2.26360350048738,3.78165106955137,2.80885274925294,1.28673953557358,1.13665399758237,4.76389276831654,5.62862543954631,5.04173772090842,6.62885259638589,4.9191057936851,3.5481435964097,5.34828072925938,4.29237442239391,3.38619492864792,4.93679549740441,4.43252153013557,4.13450928683864,6.14039947186396,4.61055242111206,3.75777972529041,3.78521907415429,5.9684675179985,0.330418782983798,0.528901133327089,2.13288250535234,2.55460339046482,3.47942145569652,2.01683524623343,2.89091456998331,2.66315876557583,1.89811624617805,1.97638745668813,2.76468729680296,1.98956472041151,3.8992817423824,1.79763881730844,0.864552199498777,1.1948476395262,3.41402221715547,2.74196430263349,2.25415471346161,4.2766778847516,4.46090720485539,2.52488951605147,3.41477300470989,1.18088118383682,1.8839847340965,1.97435462274881,10.6722945751374,3.50374722003798,4.52085688760367,4.94696647246678,3.04290182082754,2.65294875727659,5.0925170356284,4.31544206176216,1.45921704097532,3.84385978463314,8.62609239164127,8.55924179637558,7.17686648163489,8.84026072814891,8.25228102200796,5.78932225636041,2.40179147216586,2.4633883530163,5.21487924614483,3.05541154395339,4.69380496577004,3.01511263395268,4.52282917683426,1.56106918286239,3.62560831444239,4.65075848262427,3.50800491046472,3.27726629431476,2.76295970985433,2.31438493730419,3.01582567878545,1.08781136763742,1.96705709207614,1.37968373152366,1.9266070798535,1.17211686592203,2.78689407140348,2.01976741763498,0.94652465824877,3.90438744296638,3.23135096599198,4.77937595905104,5.12436950389506,3.39691836946599,4.04810701674894,4.09158201075837,2.76701444562566,2.24924921495265,2.6968616189571,3.20518086601059,3.4206261464251,2.3095817216155,1.32745138339963,3.39892890616974,2.41858845571801,2.07465587731488,3.2483208216885,2.45948118355142,1.29214146584111,1.81766864738753,2.85197902707777,1.58018378967908,0,2.06271086496374,3.40439605753788,2.70091641046965,4.13947788104814,1.92903331528433,2.48276327099183,3.38900753443934,2.13913726782757,2.74018454203139,1.64270195644597,1.0591603543191,4.6310963591542,0.8244312647074,3.39075296061402,2.47282992205439,2.38744688006273,1.31312719796049,1.7488850197791,4.07935664423121,3.07567585436135,3.714963623338,2.96311243791539,3.20226376907975,3.2806614653046,2.74533807847827,0.339956859987711,1.11961161858926,1.38199973804424,2.86401185404534,2.68885594543965,3.45643094115643,2.48412283890143,3.55450103224597,1.9652630737156,2.42755823492677,3.05817786183743,1.83229159388821,1.68499465279331,1.24267862617385,0.56369293868419,2.99033092087958,1.48912641411388,2.52786544847262,3.87479470433193,3.71703476079712,3.63807439801837,4.03633593016245,2.30690557736564,0.483168241652012,0.576060012515731,1.26404448251271,5.0681303822541,5.13554785824136,2.5984164595559,3.75956060901711,1.39076948346885,1.9231271923195,1.47689527174577,0.605798699688886,1.447929326445,0.806609481094724,1.07203668813728,0.384847366561318,0.818138315270983,1.81384306892169,1.55390167361845,1.25599399253266,0.839423081820392,3.86379188064381,3.94133198447482,4.39563898241436,1.2862102744744,1.50471631210609,6.7770221114048,4.14292712856459,4.01026859407578,1.71853182343688,4.11049511862385,0,2.02506750069542,3.15224842256954,0.906284817968409,4.14208249401456,1.3492355185943,4.38927360741134,2.73173769206615,3.64660075602441,2.09613162627982,1.65459157605013,4.22268782823069,3.7086310303001,3.20919209591815,4.04315538822076,2.5347929989024,3.77252682772152,1.87283014939765,3.3293079250532,2.69946704091382,2.38146845641537,3.70829843023538,1.73618298417335,2.88460130562315,3.53277408322554,4.4573002810104,4.2594193478241,3.57654284920981,2.32554266611726,2.4468438907986,2.876896668317,3.84148743032822,3.15683653725411,2.71608227691724,3.36685362994643,3.2031454893527,2.56111654176465,2.45538625901814,3.56354734727722,2.70069255373598,4.99621155875892,2.57324769289949,3.22306581072447,3.44318997723918,4.41182838239031,3.70988536992674 | |||
|short_description=p7@Comt | |||
}} |
Latest revision as of 17:11, 1 October 2015
Short description: | p7@Comt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Comt_5end |
Coexpression cluster: | NA |
Association with transcript: | 96bp_to_NM_001111062, NM_007744, uc007ynu.2, uc007ynv.2_5end |
EntrezGene: | Comt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 9.96e-18 | 114 |
anatomical conduit | 3.56e-16 | 122 |
epithelial tube | 2.93e-14 | 47 |
liver | 4.14e-08 | 22 |
epithelial sac | 4.14e-08 | 22 |
digestive gland | 4.14e-08 | 22 |
epithelium of foregut-midgut junction | 4.14e-08 | 22 |
anatomical boundary | 4.14e-08 | 22 |
hepatobiliary system | 4.14e-08 | 22 |
foregut-midgut junction | 4.14e-08 | 22 |
hepatic diverticulum | 4.14e-08 | 22 |
liver primordium | 4.14e-08 | 22 |
septum transversum | 4.14e-08 | 22 |
liver bud | 4.14e-08 | 22 |
primary circulatory organ | 4.42e-08 | 18 |
heart | 4.42e-08 | 18 |
primitive heart tube | 4.42e-08 | 18 |
primary heart field | 4.42e-08 | 18 |
anterior lateral plate mesoderm | 4.42e-08 | 18 |
heart tube | 4.42e-08 | 18 |
heart primordium | 4.42e-08 | 18 |
cardiac mesoderm | 4.42e-08 | 18 |
cardiogenic plate | 4.42e-08 | 18 |
heart rudiment | 4.42e-08 | 18 |
structure with developmental contribution from neural crest | 1.02e-07 | 92 |
cardiovascular system | 3.40e-07 | 23 |
circulatory system | 3.40e-07 | 23 |
digestive tract diverticulum | 4.22e-07 | 23 |
sac | 4.22e-07 | 23 |