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FFCP PHASE1:Hg19::chrX:152162673..152162689,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:152162673..152162689,-
|DHSsupport=supported 
|short_description=p2@PNMA5
|DPIdataset=robust
|description=CAGE_peak_2_at_PNMA5_5end
|association_with_transcript=-2bp_to_ENST00000535214,NM_001184924_5end
|EntrezGene=114824
|EntrezGene=114824
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=18743
|HGNC=18743
|TSSclassifier=strong
|UniProt=Q96PV4
|UniProt=Q96PV4
|association_with_transcript=-2bp_to_ENST00000535214,NM_001184924_5end
|cluster_id=chrX:152162673..152162689,-
|coexpression_cluster_id=C146
|description=CAGE_peak_2_at_PNMA5_5end
|id=chrX:152162673..152162689,-
|ontology_enrichment_celltype=CL:0000039!1.52e-07!7;CL:0000586!1.52e-07!7;CL:1000415!2.58e-07!2
|ontology_enrichment_celltype_v019=CL:1000415;2.07e-12;2!CL:0002178;9.66e-09;3
|ontology_enrichment_celltype_v019_2=CL:1000415,2.07e-12,2;CL:0002178,9.66e-09,3
|ontology_enrichment_development_v019=UBERON:0009117;2.85e-20;10!UBERON:0005564;2.85e-20;10
|ontology_enrichment_disease=DOID:5409!1.97e-12!4;DOID:1325!1.74e-07!7;DOID:3904!1.74e-07!7
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000473!6.58e-14!8;UBERON:0003135!2.85e-10!11
|ontology_enrichment_uberon_v019=UBERON:0000473;3.90e-25;8!UBERON:0003135;1.68e-18;11!UBERON:0000991;5.03e-10;21!UBERON:0003101;1.34e-09;22!UBERON:0000079;1.34e-09;22!UBERON:0002110;1.04e-08;3
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.90e-25,8;UBERON:0003135,1.68e-18,11;UBERON:0000991,5.03e-10,21;UBERON:0009196,5.03e-10,21;UBERON:0009117,5.03e-10,21;UBERON:0005564,5.03e-10,21;UBERON:0004176,1.34e-09,22;UBERON:0003101,1.34e-09,22;UBERON:0000079,1.34e-09,22;UBERON:0002110,1.04e-08,3;UBERON:0006242,1.04e-08,3;UBERON:0002323,5.18e-08,46;UBERON:0004458,1.53e-07,49;UBERON:0003886,7.16e-07,54
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|short_description=p2@PNMA5
}}
}}

Latest revision as of 23:16, 19 September 2015

Short description:p2@PNMA5
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_PNMA5_5end
Coexpression cluster:C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell
Association with transcript: -2bp_to_ENST00000535214, NM_001184924_5end
EntrezGene:PNMA5
HGNC: 18743
UniProt: Q96PV4
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data