FFCP PHASE1:Hg19::chr5:146833397..146833415,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |||
|TSSclassifier=strong | |||
|UniProt=Q14195 | |||
|association_with_transcript=106bp_to_ENST00000398514_5end | |||
|cluster_id=chr5:146833397..146833415,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_17_at_DPYSL3_5end | |||
|id=chr5:146833397..146833415,- | |||
|ontology_enrichment_celltype=CL:0002319!2.07e-13!25;CL:0000047!2.61e-11!8;CL:0000133!5.00e-10!59;CL:0000540!6.16e-09!6;CL:0000031!6.16e-09!6;CL:0000404!6.16e-09!6;CL:0002322!1.10e-07!5;CL:0000221!5.40e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.94e-21;5!CL:0002319;1.08e-18;25!CL:0000540;3.17e-18;6!CL:0000404;3.17e-18;6!CL:0000064;1.07e-09;3!CL:0000067;1.07e-09;3!CL:0005012;1.07e-09;3!CL:0002304;1.07e-09;3!CL:0000075;2.62e-08;27!CL:0000710;4.17e-08;20!CL:0002594;1.75e-07;4!CL:0002321;2.98e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.62e-22,5;CL:0000047,5.01e-21,8;CL:0000133,1.22e-18,59;CL:0002319,1.34e-18,25;CL:0000540,3.18e-18,6;CL:0000031,3.18e-18,6;CL:0000404,3.18e-18,6;CL:0000221,6.87e-15,72;CL:0000064,1.22e-09,3;CL:0000067,1.22e-09,3;CL:0005012,1.22e-09,3;CL:0002304,1.22e-09,3;CL:0000075,2.50e-08,27;CL:0000710,3.63e-08,20;CL:0002594,2.14e-07,4;CL:0000333,9.08e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000031;3.17e-18;6!CL:0000133;2.96e-10;59!UBERON:0006238;4.33e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.73e-22!82;UBERON:0005743!2.05e-21!86;UBERON:0000073!5.02e-19!94;UBERON:0001016!5.02e-19!94;UBERON:0004121!1.02e-14!169;UBERON:0000924!1.56e-14!173;UBERON:0006601!1.56e-14!173;UBERON:0003075!3.16e-14!86;UBERON:0007284!3.16e-14!86;UBERON:0002346!8.65e-14!90;UBERON:0000955!6.54e-13!69;UBERON:0006238!6.54e-13!69;UBERON:0001049!1.07e-10!57;UBERON:0005068!1.07e-10!57;UBERON:0006241!1.07e-10!57;UBERON:0007135!1.07e-10!57;UBERON:0007023!1.98e-10!115;UBERON:0000153!5.17e-10!129;UBERON:0007811!5.17e-10!129;UBERON:0002616!9.12e-10!59;UBERON:0000033!1.75e-09!123;UBERON:0001893!1.79e-09!34;UBERON:0002020!2.09e-09!34;UBERON:0003528!2.09e-09!34;UBERON:0002791!8.03e-09!33;UBERON:0003056!1.33e-08!61;UBERON:0000922!1.34e-08!612;UBERON:0001869!1.66e-08!32;UBERON:0000025!2.12e-08!194;UBERON:0000468!2.92e-08!659;UBERON:0000477!6.30e-08!286;UBERON:0004111!1.16e-07!241;UBERON:0002780!1.24e-07!41;UBERON:0001890!1.24e-07!41;UBERON:0006240!1.24e-07!41;UBERON:0000483!2.11e-07!309;UBERON:0003080!2.55e-07!42;UBERON:0000956!2.55e-07!25;UBERON:0000203!2.55e-07!25;UBERON:0000119!3.90e-07!312;UBERON:0000467!4.01e-07!625;UBERON:0000480!4.72e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.12e-10;49!UBERON:0001778;1.07e-09;3!UBERON:0001775;1.07e-09;3!UBERON:0000488;1.75e-07;4!UBERON:0001310;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.87e-13,81;UBERON:0001016,1.05e-11,89;UBERON:0001778,1.22e-09,3;UBERON:0001775,1.22e-09,3;UBERON:0004121,8.78e-08,171;UBERON:0000924,8.78e-08,171;UBERON:0006601,8.78e-08,171;UBERON:0000488,1.94e-07,4;UBERON:0001310,2.14e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0,0.940364164434263,0.572471974262113,0.821246550437305,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0,1.51255707462509,0.443458794925128,1.05401742831751,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0.596287222100115,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0,0,0,0,1.06748995729705,1.2333377420858,0.311211035399766,0.269421344139376,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0.567160915800105,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0.323292113637624,0,0.10075209822764,0.169560592310488,0,0,0,0.609868530647977,1.72288698817931,1.74290914304278,1.7622379352613,2.01856680700503,1.82488679537915,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,2.60279707715243,2.31986643833309,7.70574820538004,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0,0.114814448164607,0,0.262248829918848,0.451199612907412,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0.869932992075073,0.55597265731176,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,1.65409603063837,0.66343897524122,0,0,0.655894752046633,1.01455188481352,0.30982349809975,0.281695602532241,0,0,1.426684205925,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.398495976502139,0,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0.371072392647405,13.9729658600836,0,0,0,0,0,0,0,0,0.694499979733169,0,0.361789315876224,0,0,0,0.438770794307945,0,0,0.461701551022782,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0.789168805698781,0,13.7732742733721,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.90392296312213,0.137041924646751,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,1.35904206073614,1.04602846312333,0.101998217636322,0,0,0.273810757783986,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0.964518890790115,1.37539436597234,0.83088067605837,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0.221858103073705,0.745156835296601,3.04366996859708,0,0,0,0,0.468334905806882,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0.318593534327405,0,0.465788870628778,0,0.265841714557995,0,0,0,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0.385239660814607,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873677105536111,0,0.212574920101683,0,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0,10.0828678488687,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0,0,0,0,0,0.337687923091973,0,0,0.253663240775627,2.7348740450911,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.40781839786099,0,0,0,0.863424021355654,0,0.280272163313789,0,0,0,0.357382720883282,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0.467878926924211,0,0,0.5647304101948,0,0,0.0771741581079447,0.218559560503957,0,0.735444965261716,0,0,0.594092800654172,2.9585900930838,0.169927114687817,0,0.128915775947154,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0,10.9087672585094,0.5290268405154,0.371995018166751,0,0,0.378499274505237,3.05943601498347,0.126698501011437,0.509944148709909,1.06886962106224,0.275684698604535,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0.426467963801962,0,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0,0,0,0.0673520530145875,0.215166616178029,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p17@DPYSL3 | |||
}} |
Latest revision as of 22:07, 15 September 2015
Short description: | p17@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_DPYSL3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 106bp_to_ENST00000398514_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | Q14195 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.62e-22 | 5 |
neuronal stem cell | 5.01e-21 | 8 |
neurectodermal cell | 1.22e-18 | 59 |
neural cell | 1.34e-18 | 25 |
neuron | 3.18e-18 | 6 |
neuroblast | 3.18e-18 | 6 |
electrically signaling cell | 3.18e-18 | 6 |
ectodermal cell | 6.87e-15 | 72 |
ciliated cell | 1.22e-09 | 3 |
ciliated epithelial cell | 1.22e-09 | 3 |
multi-ciliated epithelial cell | 1.22e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.22e-09 | 3 |
columnar/cuboidal epithelial cell | 2.50e-08 | 27 |
neurecto-epithelial cell | 3.63e-08 | 20 |
smooth muscle cell of the umbilical artery | 2.14e-07 | 4 |
migratory neural crest cell | 9.08e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.87e-13 | 81 |
nervous system | 1.05e-11 | 89 |
ciliary epithelium | 1.22e-09 | 3 |
ciliary body | 1.22e-09 | 3 |
ectoderm-derived structure | 8.78e-08 | 171 |
ectoderm | 8.78e-08 | 171 |
presumptive ectoderm | 8.78e-08 | 171 |
atypical epithelium | 1.94e-07 | 4 |
umbilical artery | 2.14e-07 | 4 |