FFCP PHASE1:Hg19::chrX:15353629..15353684,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:15353629..15353684,-
|short_description=p1@PIGA
|description=CAGE_peak_1_at_PIGA_5end
|association_with_transcript=0bp_to_ENST00000333590,ENST00000428964,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5277 | |EntrezGene=5277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8957 | |HGNC=8957 | ||
|TSSclassifier=strong | |||
|UniProt=P37287,B3KUV7,B4E0V2,A8K382 | |UniProt=P37287,B3KUV7,B4E0V2,A8K382 | ||
|association_with_transcript=0bp_to_ENST00000333590,ENST00000428964,ENST00000474662,ENST00000542278,NM_002641,NM_020473,NR_033835,NR_033836,uc004cwr.2,uc004cws.2,uc010new.1,uc011miq.1_5end | |||
|cluster_id=chrX:15353629..15353684,- | |||
|coexpression_cluster_id=C427 | |||
|description=CAGE_peak_1_at_PIGA_5end | |||
|id=chrX:15353629..15353684,- | |||
|ontology_enrichment_celltype=CL:0000738!5.68e-36!140;CL:0000037!3.74e-32!172;CL:0000566!3.74e-32!172;CL:0002032!1.70e-29!165;CL:0000837!1.70e-29!165;CL:0002031!8.98e-29!124;CL:0000988!2.41e-28!182;CL:0002087!3.48e-26!119;CL:0000766!5.52e-23!76;CL:0000860!6.77e-22!45;CL:0002057!1.20e-21!42;CL:0000763!1.93e-20!112;CL:0000049!1.93e-20!112;CL:0000557!5.82e-20!71;CL:0000839!2.80e-19!70;CL:0002009!4.99e-18!65;CL:0002194!7.69e-17!63;CL:0000576!7.69e-17!63;CL:0000040!7.69e-17!63;CL:0000559!7.69e-17!63;CL:0000838!9.24e-09!52;CL:0000542!1.62e-08!53;CL:0000051!1.62e-08!53;CL:0000791!4.23e-08!18;CL:0000789!4.23e-08!18;CL:0002420!4.23e-08!18;CL:0002419!4.23e-08!18;CL:0000790!4.23e-08!18;CL:0000084!9.97e-08!25;CL:0000827!9.97e-08!25;CL:0002393!6.16e-07!9;CL:0002397!6.16e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.96e-15;33!CL:0002057;5.96e-15;33!CL:0000576;3.71e-13;48!CL:0000473;3.43e-12;39!CL:0000234;3.43e-12;39!CL:0000766;6.85e-12;69!CL:0002087;1.10e-09;104!CL:0000791;3.03e-08;18!CL:0000789;3.03e-08;18!CL:0002419;3.03e-08;18!CL:0000084;5.89e-08;25!CL:0000738;1.51e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.51e-35,136;CL:0000037,1.31e-31,168;CL:0002032,5.79e-29,161;CL:0000837,5.79e-29,161;CL:0000988,1.76e-28,177;CL:0002031,2.33e-28,120;CL:0002087,9.04e-26,115;CL:0000766,9.82e-23,72;CL:0000860,1.16e-21,42;CL:0002057,1.16e-21,42;CL:0000473,6.73e-21,48;CL:0000234,6.73e-21,48;CL:0000763,5.41e-20,108;CL:0000049,5.41e-20,108;CL:0000557,1.09e-19,67;CL:0000839,5.32e-19,66;CL:0002009,9.26e-18,61;CL:0002194,1.47e-16,59;CL:0000576,1.47e-16,59;CL:0000040,1.47e-16,59;CL:0000559,1.47e-16,59;CL:0000838,9.14e-09,52;CL:0000542,1.60e-08,53;CL:0000051,1.60e-08,53;CL:0000791,4.19e-08,18;CL:0000789,4.19e-08,18;CL:0002420,4.19e-08,18;CL:0002419,4.19e-08,18;CL:0000790,4.19e-08,18;CL:0000084,9.88e-08,25;CL:0000827,9.88e-08,25;CL:0002393,6.11e-07,9;CL:0002397,6.11e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.44e-16;42!CL:0000790;3.03e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.93e-17!102;UBERON:0003061!9.93e-17!102;UBERON:0002371!2.88e-16!80;UBERON:0001474!2.62e-14!86;UBERON:0002193!7.18e-13!112;UBERON:0004765!1.14e-09!101;UBERON:0001434!1.14e-09!101;UBERON:0002405!8.97e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.71e-16,98;UBERON:0003061,2.71e-16,98;UBERON:0002371,7.00e-16,76;UBERON:0001474,6.82e-14,82;UBERON:0002193,1.97e-12,108;UBERON:0004765,3.91e-11,90;UBERON:0002405,4.27e-11,93;UBERON:0001434,4.74e-08,100 | |||
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| ||
|short_description=p1@PIGA | |||
}} | }} |
Latest revision as of 02:03, 20 September 2015
Short description: | p1@PIGA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PIGA_5end |
Coexpression cluster: | C427_Eosinophils_CD4_Peripheral_Neutrophils_Basophils_mature_Mast |
Association with transcript: | 0bp_to_ENST00000333590, ENST00000428964, ENST00000474662, ENST00000542278, NM_002641, NM_020473, NR_033835, NR_033836, uc004cwr.2, uc004cws.2, uc010new.1, uc011miq.1_5end |
EntrezGene: | PIGA |
HGNC: | 8957 |
UniProt: | P37287B3KUV7B4E0V2A8K382 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.71e-16 | 98 |
blood island | 2.71e-16 | 98 |
bone marrow | 7.00e-16 | 76 |
bone element | 6.82e-14 | 82 |
hemolymphoid system | 1.97e-12 | 108 |
skeletal element | 3.91e-11 | 90 |
immune system | 4.27e-11 | 93 |
skeletal system | 4.74e-08 | 100 |