FFCP PHASE1:Mm9::chr18:69681228..69681237,+: Difference between revisions
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{{FFCP|EntrezGene=21413|HGNC=|MCL_coexpression_id=176|UniProt=|association_with_transcript=36bp_to_ENSMUST00000125154_5end|description=CAGE_peak_44_at_Tcf4_5end|id=chr18:69681228..69681237,+|ontology_enrichment_celltype=CL:0002453!1.34e-07!8;CL:0000128!7.64e-07!6;CL:0000126!7.64e-07!6;CL:0000127!7.64e-07!6|ontology_enrichment_celltype_v019_2=CL:0002605,4.55e-44,2;CL:0002604,4.55e-44,2;CL:0000128,2.03e-33,6;CL:0000126,2.03e-33,6;CL:0000127,2.03e-33,6;CL:0002453,2.39e-25,8;CL:0000333,1.71e-20,10;CL:0000095,1.71e-20,10;CL:0000243,1.71e-20,10;CL:0000123,1.71e-20,10;CL:0000125,1.71e-20,10;CL:0000030,1.71e-20,10;CL:0000339,1.71e-20,10;CL:0002603,2.42e-12,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.79e-13,7;UBERON:0003022,1.79e-13,7;UBERON:0002421,1.79e-13,7;UBERON:0000349,1.79e-13,7;UBERON:0002600,1.79e-13,7;UBERON:0002037,8.08e-07,4;UBERON:0002680,8.08e-07,4;UBERON:0001895,8.08e-07,4;UBERON:0010092,8.08e-07,4;UBERON:0006215,8.08e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,2.19686182734472,1.36100929351998,0.55994568650145,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0,0,0.308713837137853,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p44@Tcf4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21413 | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=36bp_to_ENSMUST00000125154_5end | |||
|cluster_id=chr18:69681228..69681237,+ | |||
|description=CAGE_peak_44_at_Tcf4_5end | |||
|id=chr18:69681228..69681237,+ | |||
|ontology_enrichment_celltype=CL:0002453!1.34e-07!8;CL:0000128!7.64e-07!6;CL:0000126!7.64e-07!6;CL:0000127!7.64e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.55e-44,2;CL:0002604,4.55e-44,2;CL:0000128,2.03e-33,6;CL:0000126,2.03e-33,6;CL:0000127,2.03e-33,6;CL:0002453,2.39e-25,8;CL:0000333,1.71e-20,10;CL:0000095,1.71e-20,10;CL:0000243,1.71e-20,10;CL:0000123,1.71e-20,10;CL:0000125,1.71e-20,10;CL:0000030,1.71e-20,10;CL:0000339,1.71e-20,10;CL:0002603,2.42e-12,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.79e-13,7;UBERON:0003022,1.79e-13,7;UBERON:0002421,1.79e-13,7;UBERON:0000349,1.79e-13,7;UBERON:0002600,1.79e-13,7;UBERON:0002037,8.08e-07,4;UBERON:0002680,8.08e-07,4;UBERON:0001895,8.08e-07,4;UBERON:0010092,8.08e-07,4;UBERON:0006215,8.08e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,2.19686182734472,1.36100929351998,0.55994568650145,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0,0,0.308713837137853,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p44@Tcf4 | |||
}} |
Latest revision as of 16:42, 1 October 2015
Short description: | p44@Tcf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_44_at_Tcf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | 36bp_to_ENSMUST00000125154_5end |
EntrezGene: | Tcf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.55e-44 | 2 |
astrocyte of the hippocampus | 4.55e-44 | 2 |
oligodendrocyte | 2.03e-33 | 6 |
macroglial cell | 2.03e-33 | 6 |
astrocyte | 2.03e-33 | 6 |
oligodendrocyte precursor cell | 2.39e-25 | 8 |
migratory neural crest cell | 1.71e-20 | 10 |
neuron associated cell | 1.71e-20 | 10 |
glial cell (sensu Vertebrata) | 1.71e-20 | 10 |
neuron associated cell (sensu Vertebrata) | 1.71e-20 | 10 |
glial cell | 1.71e-20 | 10 |
glioblast | 1.71e-20 | 10 |
glioblast (sensu Vertebrata) | 1.71e-20 | 10 |
astrocyte of the cerebellum | 2.42e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.79e-13 | 7 |
lobe parts of cerebral cortex | 1.79e-13 | 7 |
hippocampal formation | 1.79e-13 | 7 |
limbic system | 1.79e-13 | 7 |
limbic lobe | 1.79e-13 | 7 |
cerebellum | 8.08e-07 | 4 |
regional part of metencephalon | 8.08e-07 | 4 |
metencephalon | 8.08e-07 | 4 |
future metencephalon | 8.08e-07 | 4 |
rhombic lip | 8.08e-07 | 4 |