FFCP PHASE1:Mm9::chr1:166467691..166467700,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1061|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:166467691..166467700,-|id=chr1:166467691..166467700,-|ontology_enrichment_celltype=CL:0002563!2.34e-13!9;CL:0002251!2.34e-13!9;CL:0000239!1.03e-07!6;CL:0000677!1.03e-07!6;CL:0000212!1.03e-07!6;CL:0000584!1.03e-07!6;CL:0002250!1.61e-07!3;CL:0002076!2.28e-07!15|ontology_enrichment_celltype_v019_2=CL:0002250,1.69e-23,3;CL:0002563,1.19e-13,9;CL:0002251,1.19e-13,9;CL:0002076,2.70e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.24e-25!43;UBERON:0005409!4.24e-23!59;UBERON:0000344!4.59e-23!15;UBERON:0001242!2.66e-20!13;UBERON:0000060!2.66e-20!13;UBERON:0001262!2.66e-20!13;UBERON:0004786!2.66e-20!13;UBERON:0003350!2.34e-13!9;UBERON:0004808!2.34e-13!9;UBERON:0001277!2.34e-13!9;UBERON:0004923!4.88e-13!24;UBERON:0000485!1.25e-10!11;UBERON:0001007!7.19e-08!128;UBERON:0001555!7.19e-08!128;UBERON:0007026!7.19e-08!128;UBERON:0004119!1.25e-07!130;UBERON:0000925!1.25e-07!130;UBERON:0006595!1.25e-07!130;UBERON:0000331!4.43e-07!3;UBERON:0002116!4.43e-07!3;UBERON:0001204!4.43e-07!3;UBERON:0001168!4.43e-07!3;UBERON:0004921!9.77e-07!126;UBERON:0004185!9.77e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.63e-28,31;UBERON:0005409,1.32e-21,47;UBERON:0001242,2.23e-20,13;UBERON:0001262,2.23e-20,13;UBERON:0004786,2.23e-20,13;UBERON:0000344,1.21e-17,15;UBERON:0001155,8.11e-16,2;UBERON:0000059,8.11e-16,2;UBERON:0003350,1.19e-13,9;UBERON:0004808,1.19e-13,9;UBERON:0001277,1.19e-13,9;UBERON:0000485,3.19e-11,11;UBERON:0004923,5.91e-11,24;UBERON:0000331,1.02e-10,3;UBERON:0002116,1.02e-10,3;UBERON:0001204,1.02e-10,3;UBERON:0001168,1.02e-10,3;UBERON:0001153,5.23e-09,1;UBERON:0001045,5.23e-09,1;UBERON:0004921,2.44e-08,114;UBERON:0002108,2.91e-08,4;UBERON:0001007,3.55e-08,116;UBERON:0001555,3.55e-08,116;UBERON:0007026,3.55e-08,116;UBERON:0004119,5.10e-08,118;UBERON:0000925,5.10e-08,118;UBERON:0006595,5.10e-08,118|phase1_expression=0,0.348975407639361,0,1.20985684522732,0.500895729946347,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,0,0.86152399231815,0.430942465371778,1.90023419456374,0.756090389279792,1.55211357458713,0,0,0,5.48818077527422,2.49351968037739,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.58670339998127,0,0,0.257734922644187,0.605050573870028,0.667134131534611,0.760902504450237,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0.898819408654221,1.08069024937347,2.19055400579804,0.189667900953082,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0.0603129249281559,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr1:166467691..166467700,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1061 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:166467691..166467700,- | |||
|description=CAGE_peak_at_chr1:166467691..166467700,- | |||
|id=chr1:166467691..166467700,- | |||
|ontology_enrichment_celltype=CL:0002563!2.34e-13!9;CL:0002251!2.34e-13!9;CL:0000239!1.03e-07!6;CL:0000677!1.03e-07!6;CL:0000212!1.03e-07!6;CL:0000584!1.03e-07!6;CL:0002250!1.61e-07!3;CL:0002076!2.28e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.69e-23,3;CL:0002563,1.19e-13,9;CL:0002251,1.19e-13,9;CL:0002076,2.70e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.24e-25!43;UBERON:0005409!4.24e-23!59;UBERON:0000344!4.59e-23!15;UBERON:0001242!2.66e-20!13;UBERON:0000060!2.66e-20!13;UBERON:0001262!2.66e-20!13;UBERON:0004786!2.66e-20!13;UBERON:0003350!2.34e-13!9;UBERON:0004808!2.34e-13!9;UBERON:0001277!2.34e-13!9;UBERON:0004923!4.88e-13!24;UBERON:0000485!1.25e-10!11;UBERON:0001007!7.19e-08!128;UBERON:0001555!7.19e-08!128;UBERON:0007026!7.19e-08!128;UBERON:0004119!1.25e-07!130;UBERON:0000925!1.25e-07!130;UBERON:0006595!1.25e-07!130;UBERON:0000331!4.43e-07!3;UBERON:0002116!4.43e-07!3;UBERON:0001204!4.43e-07!3;UBERON:0001168!4.43e-07!3;UBERON:0004921!9.77e-07!126;UBERON:0004185!9.77e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.63e-28,31;UBERON:0005409,1.32e-21,47;UBERON:0001242,2.23e-20,13;UBERON:0001262,2.23e-20,13;UBERON:0004786,2.23e-20,13;UBERON:0000344,1.21e-17,15;UBERON:0001155,8.11e-16,2;UBERON:0000059,8.11e-16,2;UBERON:0003350,1.19e-13,9;UBERON:0004808,1.19e-13,9;UBERON:0001277,1.19e-13,9;UBERON:0000485,3.19e-11,11;UBERON:0004923,5.91e-11,24;UBERON:0000331,1.02e-10,3;UBERON:0002116,1.02e-10,3;UBERON:0001204,1.02e-10,3;UBERON:0001168,1.02e-10,3;UBERON:0001153,5.23e-09,1;UBERON:0001045,5.23e-09,1;UBERON:0004921,2.44e-08,114;UBERON:0002108,2.91e-08,4;UBERON:0001007,3.55e-08,116;UBERON:0001555,3.55e-08,116;UBERON:0007026,3.55e-08,116;UBERON:0004119,5.10e-08,118;UBERON:0000925,5.10e-08,118;UBERON:0006595,5.10e-08,118 | |||
|phase1_expression=0,0.348975407639361,0,1.20985684522732,0.500895729946347,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,0,0.86152399231815,0.430942465371778,1.90023419456374,0.756090389279792,1.55211357458713,0,0,0,5.48818077527422,2.49351968037739,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.58670339998127,0,0,0.257734922644187,0.605050573870028,0.667134131534611,0.760902504450237,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0.898819408654221,1.08069024937347,2.19055400579804,0.189667900953082,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0,0.0603129249281559,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:166467691..166467700,- | |||
}} |
Latest revision as of 04:00, 5 August 2015
Short description: | p@chr1:166467691..166467700, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:166467691..166467700, - |
Coexpression cluster: | MCL_coexpression_mm9:1061 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.69e-23 | 3 |
intestinal epithelial cell | 1.19e-13 | 9 |
epithelial cell of alimentary canal | 1.19e-13 | 9 |
endo-epithelial cell | 2.70e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.63e-28 | 31 |
gastrointestinal system | 1.32e-21 | 47 |
intestinal mucosa | 2.23e-20 | 13 |
wall of intestine | 2.23e-20 | 13 |
gastrointestinal system mucosa | 2.23e-20 | 13 |
mucosa | 1.21e-17 | 15 |
colon | 8.11e-16 | 2 |
large intestine | 8.11e-16 | 2 |
epithelium of mucosa | 1.19e-13 | 9 |
gastrointestinal system epithelium | 1.19e-13 | 9 |
intestinal epithelium | 1.19e-13 | 9 |
simple columnar epithelium | 3.19e-11 | 11 |
organ component layer | 5.91e-11 | 24 |
ileal mucosa | 1.02e-10 | 3 |
ileum | 1.02e-10 | 3 |
mucosa of small intestine | 1.02e-10 | 3 |
wall of small intestine | 1.02e-10 | 3 |
caecum | 5.23e-09 | 1 |
midgut | 5.23e-09 | 1 |
subdivision of digestive tract | 2.44e-08 | 114 |
small intestine | 2.91e-08 | 4 |
digestive system | 3.55e-08 | 116 |
digestive tract | 3.55e-08 | 116 |
primitive gut | 3.55e-08 | 116 |
endoderm-derived structure | 5.10e-08 | 118 |
endoderm | 5.10e-08 | 118 |
presumptive endoderm | 5.10e-08 | 118 |