FFCP PHASE1:Hg19::chr6:31620174..31620188,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13916 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SRP5 | |||
|association_with_transcript=-4bp_to_ENST00000375918_5end | |||
|cluster_id=chr6:31620174..31620188,+ | |||
|description=CAGE_peak_3_at_APOM_5end | |||
|id=chr6:31620174..31620188,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.99e-14!119;CL:0002031!1.34e-12!124;CL:0000738!7.20e-12!140;CL:0002057!1.02e-11!42;CL:0000860!1.96e-11!45;CL:0000988!3.94e-11!182;CL:0000037!2.58e-10!172;CL:0000566!2.58e-10!172;CL:0002194!1.62e-09!63;CL:0000576!1.62e-09!63;CL:0000040!1.62e-09!63;CL:0000559!1.62e-09!63;CL:0002009!3.09e-09!65;CL:0002032!5.34e-09!165;CL:0000837!5.34e-09!165;CL:0000839!2.29e-08!70;CL:0000766!1.53e-07!76;CL:0000557!7.55e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000576;9.02e-09;48!CL:0000860;1.20e-08;33!CL:0002057;1.20e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.28e-14,115;CL:0000988,5.73e-14,177;CL:0000738,1.29e-13,136;CL:0002031,5.16e-13,120;CL:0000037,8.55e-13,168;CL:0000860,3.07e-12,42;CL:0002057,3.07e-12,42;CL:0000473,1.81e-11,48;CL:0000234,1.81e-11,48;CL:0002032,3.90e-11,161;CL:0000837,3.90e-11,161;CL:0002194,5.71e-11,59;CL:0000576,5.71e-11,59;CL:0000040,5.71e-11,59;CL:0000559,5.71e-11,59;CL:0002009,5.98e-11,61;CL:0000839,5.82e-10,66;CL:0000766,1.56e-09,72;CL:0000557,1.36e-08,67;CL:0000763,2.93e-07,108;CL:0000049,2.93e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.01e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.06e-07!102;UBERON:0003061!3.06e-07!102;UBERON:0002371!3.56e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.10e-09,76;UBERON:0002390,1.33e-08,98;UBERON:0003061,1.33e-08,98;UBERON:0001474,9.22e-08,82;UBERON:0002405,5.36e-07,93 | |||
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| |||
|short_description=p3@APOM | |||
}} |
Latest revision as of 22:52, 17 September 2015
Short description: | p3@APOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_APOM_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000375918_5end |
EntrezGene: | APOM |
HGNC: | 13916 |
UniProt: | Q5SRP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 2.28e-14 | 115 |
hematopoietic cell | 5.73e-14 | 177 |
leukocyte | 1.29e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 5.16e-13 | 120 |
hematopoietic stem cell | 8.55e-13 | 168 |
classical monocyte | 3.07e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.07e-12 | 42 |
defensive cell | 1.81e-11 | 48 |
phagocyte | 1.81e-11 | 48 |
hematopoietic oligopotent progenitor cell | 3.90e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.90e-11 | 161 |
monopoietic cell | 5.71e-11 | 59 |
monocyte | 5.71e-11 | 59 |
monoblast | 5.71e-11 | 59 |
promonocyte | 5.71e-11 | 59 |
macrophage dendritic cell progenitor | 5.98e-11 | 61 |
myeloid lineage restricted progenitor cell | 5.82e-10 | 66 |
myeloid leukocyte | 1.56e-09 | 72 |
granulocyte monocyte progenitor cell | 1.36e-08 | 67 |
myeloid cell | 2.93e-07 | 108 |
common myeloid progenitor | 2.93e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.10e-09 | 76 |
hematopoietic system | 1.33e-08 | 98 |
blood island | 1.33e-08 | 98 |
bone element | 9.22e-08 | 82 |
immune system | 5.36e-07 | 93 |