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FFCP PHASE1:Mm9::chr1:72330822..72330840,-: Difference between revisions

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{{FFCP|EntrezGene=111175|HGNC=|MCL_coexpression_id=8|UniProt=Q3UXD9,D6RHN4|association_with_transcript=0bp_to_ENSMUST00000097698,ENSMUST00000134840_5end|description=CAGE_peak_1_at_Pecr_5end|id=chr1:72330822..72330840,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!2.03e-12!25;UBERON:0002330!2.03e-12!25;UBERON:0005172!3.76e-12!49;UBERON:0005173!3.76e-12!49;UBERON:0002417!3.76e-12!49;UBERON:0000916!3.76e-12!49;UBERON:0002107!6.48e-12!22;UBERON:0007499!6.48e-12!22;UBERON:0006925!6.48e-12!22;UBERON:0009497!6.48e-12!22;UBERON:0000015!6.48e-12!22;UBERON:0002423!6.48e-12!22;UBERON:0006235!6.48e-12!22;UBERON:0008835!6.48e-12!22;UBERON:0003894!6.48e-12!22;UBERON:0004161!6.48e-12!22;UBERON:0008836!6.48e-12!22;UBERON:0009854!9.73e-11!23;UBERON:0009856!9.73e-11!23;UBERON:0000160!3.29e-10!43;UBERON:0002108!1.00e-08!16;UBERON:0005409!1.12e-08!59;UBERON:0005256!6.14e-08!47;UBERON:0001264!2.27e-07!12;UBERON:0003922!2.27e-07!12;UBERON:0002114!2.27e-07!12;UBERON:0003923!2.27e-07!12;UBERON:0003924!2.27e-07!12;UBERON:0003921!2.27e-07!12;UBERON:0005177!3.39e-07!85;UBERON:0003914!3.91e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.03e-12,25;UBERON:0002330,2.03e-12,25;UBERON:0005172,3.76e-12,49;UBERON:0005173,3.76e-12,49;UBERON:0002417,3.76e-12,49;UBERON:0000916,3.76e-12,49;UBERON:0002107,6.48e-12,22;UBERON:0007499,6.48e-12,22;UBERON:0006925,6.48e-12,22;UBERON:0009497,6.48e-12,22;UBERON:0000015,6.48e-12,22;UBERON:0002423,6.48e-12,22;UBERON:0006235,6.48e-12,22;UBERON:0008835,6.48e-12,22;UBERON:0003894,6.48e-12,22;UBERON:0004161,6.48e-12,22;UBERON:0008836,6.48e-12,22;UBERON:0009854,9.73e-11,23;UBERON:0009856,9.73e-11,23;UBERON:0003104,1.83e-10,61;UBERON:0009142,1.83e-10,61;UBERON:0005177,1.67e-09,79;UBERON:0002100,1.35e-07,90;UBERON:0005256,2.10e-07,45;UBERON:0001264,2.27e-07,12;UBERON:0003914,3.91e-07,47|phase1_expression=20.4990524294136,5.93258192986914,8.64498554840118,13.0059610861937,9.5170188689806,14.6054966563344,14.7175963575181,2.32421982194837,1.83025338797167,0.70219357896598,11.9852577757853,10.6894693053751,1.71200729931206,1.31130603628496,6.66219523631325,3.84703008040669,7.69518065940961,2.68142840554502,5.07323404341233,5.09267582157636,45.6682468111245,0.992909512008853,0.522399578277871,7.51964387129011,8.48814339948529,12.6331032105304,9.47676391549965,7.97243560937789,38.7647775691003,22.6827116783938,16.8515188098032,8.89042942843484,4.30545351309199,15.8481681015439,31.7736781726402,28.0936550655852,33.4837744270285,0,0.7813353445238,1.57057123192139,0.588231488031014,0,0.485510353031154,12.3378881616066,11.3542162965856,11.9305388905093,11.7358701652206,6.5407546914134,6.59058548203415,7.58276606389705,7.55926676776958,7.18762821824858,1.8456086666351,2.17608642603403,2.35265659399725,8.2323019531503,8.30946975822394,6.70373719960675,2.02316460859598,3.1739458756322,1.26766280701236,7.45457970552091,8.00365316500025,6.29929802096979,7.9109309005358,7.8152812644071,7.49000276296012,5.76327457982332,4.04389488003063,3.10513658162888,2.94454945891935,4.28476476605705,5.52171352379034,3.1847607795888,3.73797336971122,5.51531271966013,12.1127469099328,4.21368215681119,4.14737639791857,2.37395317914349,1.64677758484337,2.08365348222704,5.58365998002762,7.87867654044352,3.66715794664344,2.94628585473668,4.27115042397309,2.42319279572891,4.92220256665696,4.23200736597999,6.95674772884027,448.280839907302,172.032747428061,522.972392697045,485.382983833409,393.815633758558,134.68619890635,10.9075406449957,12.7295142255406,9.54016851177919,16.760366953425,8.98285341900225,20.3844191765317,7.11066703153331,4.5463118612355,3.80039798212648,2.52762222507392,199.136686230041,4.14300613835475,11.5784868470563,11.1030609130327,10.3518262626128,13.6063143381075,14.1679282119465,12.346814249249,18.598655516792,20.2699873542187,23.8588938917854,1.76922110389975,8.8971767471075,9.27534377533653,9.21262980956922,3.72783522436244,3.51336956413857,2.93225389538837,9.96282515313506,5.27186547826049,2.39961092397363,5.33694953706872,3.89455662452539,5.03250663100489,3.76963056338593,4.17178368461463,4.60287823194595,2.90903262383384,5.02947915510049,11.915205570487,6.71797641294502,11.3725241295154,19.1502088856691,10.4096354370163,11.0353010128067,6.48223667299257,11.0014517020072,6.46346741937615,8.07116437794554,5.24729657534481,9.8307280880826,7.32931175971664,11.9136830505726,10.7330185740009,8.76782929710299,13.9023624612799,9.75106066262066,13.1700567301084,12.7381930763836,7.02213187313235,5.91900186363845,5.68326998791185,6.00664740352955,10.5536726991493,7.20248245844059,7.10234206755631,7.47704080640135,5.55361606394562,7.20855228726264,9.12129564758705,9.80828875884224,10.8609500942897,7.88003827579657,11.0253580982364,11.2573990317506,14.9294078397914,9.5286557319864,4.6263788684108,5.04232600658494,7.26921322564356,15.6025834331491,11.5175655289026,10.4506502337197,10.1805294444454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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=111175
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=Q3UXD9,D6RHN4
|association_with_transcript=0bp_to_ENSMUST00000097698,ENSMUST00000134840_5end
|cluster_id=chr1:72330822..72330840,-
|description=CAGE_peak_1_at_Pecr_5end
|id=chr1:72330822..72330840,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!2.03e-12!25;UBERON:0002330!2.03e-12!25;UBERON:0005172!3.76e-12!49;UBERON:0005173!3.76e-12!49;UBERON:0002417!3.76e-12!49;UBERON:0000916!3.76e-12!49;UBERON:0002107!6.48e-12!22;UBERON:0007499!6.48e-12!22;UBERON:0006925!6.48e-12!22;UBERON:0009497!6.48e-12!22;UBERON:0000015!6.48e-12!22;UBERON:0002423!6.48e-12!22;UBERON:0006235!6.48e-12!22;UBERON:0008835!6.48e-12!22;UBERON:0003894!6.48e-12!22;UBERON:0004161!6.48e-12!22;UBERON:0008836!6.48e-12!22;UBERON:0009854!9.73e-11!23;UBERON:0009856!9.73e-11!23;UBERON:0000160!3.29e-10!43;UBERON:0002108!1.00e-08!16;UBERON:0005409!1.12e-08!59;UBERON:0005256!6.14e-08!47;UBERON:0001264!2.27e-07!12;UBERON:0003922!2.27e-07!12;UBERON:0002114!2.27e-07!12;UBERON:0003923!2.27e-07!12;UBERON:0003924!2.27e-07!12;UBERON:0003921!2.27e-07!12;UBERON:0005177!3.39e-07!85;UBERON:0003914!3.91e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.03e-12,25;UBERON:0002330,2.03e-12,25;UBERON:0005172,3.76e-12,49;UBERON:0005173,3.76e-12,49;UBERON:0002417,3.76e-12,49;UBERON:0000916,3.76e-12,49;UBERON:0002107,6.48e-12,22;UBERON:0007499,6.48e-12,22;UBERON:0006925,6.48e-12,22;UBERON:0009497,6.48e-12,22;UBERON:0000015,6.48e-12,22;UBERON:0002423,6.48e-12,22;UBERON:0006235,6.48e-12,22;UBERON:0008835,6.48e-12,22;UBERON:0003894,6.48e-12,22;UBERON:0004161,6.48e-12,22;UBERON:0008836,6.48e-12,22;UBERON:0009854,9.73e-11,23;UBERON:0009856,9.73e-11,23;UBERON:0003104,1.83e-10,61;UBERON:0009142,1.83e-10,61;UBERON:0005177,1.67e-09,79;UBERON:0002100,1.35e-07,90;UBERON:0005256,2.10e-07,45;UBERON:0001264,2.27e-07,12;UBERON:0003914,3.91e-07,47
|phase1_expression=20.4990524294136,5.93258192986914,8.64498554840118,13.0059610861937,9.5170188689806,14.6054966563344,14.7175963575181,2.32421982194837,1.83025338797167,0.70219357896598,11.9852577757853,10.6894693053751,1.71200729931206,1.31130603628496,6.66219523631325,3.84703008040669,7.69518065940961,2.68142840554502,5.07323404341233,5.09267582157636,45.6682468111245,0.992909512008853,0.522399578277871,7.51964387129011,8.48814339948529,12.6331032105304,9.47676391549965,7.97243560937789,38.7647775691003,22.6827116783938,16.8515188098032,8.89042942843484,4.30545351309199,15.8481681015439,31.7736781726402,28.0936550655852,33.4837744270285,0,0.7813353445238,1.57057123192139,0.588231488031014,0,0.485510353031154,12.3378881616066,11.3542162965856,11.9305388905093,11.7358701652206,6.5407546914134,6.59058548203415,7.58276606389705,7.55926676776958,7.18762821824858,1.8456086666351,2.17608642603403,2.35265659399725,8.2323019531503,8.30946975822394,6.70373719960675,2.02316460859598,3.1739458756322,1.26766280701236,7.45457970552091,8.00365316500025,6.29929802096979,7.9109309005358,7.8152812644071,7.49000276296012,5.76327457982332,4.04389488003063,3.10513658162888,2.94454945891935,4.28476476605705,5.52171352379034,3.1847607795888,3.73797336971122,5.51531271966013,12.1127469099328,4.21368215681119,4.14737639791857,2.37395317914349,1.64677758484337,2.08365348222704,5.58365998002762,7.87867654044352,3.66715794664344,2.94628585473668,4.27115042397309,2.42319279572891,4.92220256665696,4.23200736597999,6.95674772884027,448.280839907302,172.032747428061,522.972392697045,485.382983833409,393.815633758558,134.68619890635,10.9075406449957,12.7295142255406,9.54016851177919,16.760366953425,8.98285341900225,20.3844191765317,7.11066703153331,4.5463118612355,3.80039798212648,2.52762222507392,199.136686230041,4.14300613835475,11.5784868470563,11.1030609130327,10.3518262626128,13.6063143381075,14.1679282119465,12.346814249249,18.598655516792,20.2699873542187,23.8588938917854,1.76922110389975,8.8971767471075,9.27534377533653,9.21262980956922,3.72783522436244,3.51336956413857,2.93225389538837,9.96282515313506,5.27186547826049,2.39961092397363,5.33694953706872,3.89455662452539,5.03250663100489,3.76963056338593,4.17178368461463,4.60287823194595,2.90903262383384,5.02947915510049,11.915205570487,6.71797641294502,11.3725241295154,19.1502088856691,10.4096354370163,11.0353010128067,6.48223667299257,11.0014517020072,6.46346741937615,8.07116437794554,5.24729657534481,9.8307280880826,7.32931175971664,11.9136830505726,10.7330185740009,8.76782929710299,13.9023624612799,9.75106066262066,13.1700567301084,12.7381930763836,7.02213187313235,5.91900186363845,5.68326998791185,6.00664740352955,10.5536726991493,7.20248245844059,7.10234206755631,7.47704080640135,5.55361606394562,7.20855228726264,9.12129564758705,9.80828875884224,10.8609500942897,7.88003827579657,11.0253580982364,11.2573990317506,14.9294078397914,9.5286557319864,4.6263788684108,5.04232600658494,7.26921322564356,15.6025834331491,11.5175655289026,10.4506502337197,10.1805294444454,21.176770085451,34.6909748397998,41.2789608664253,11.8632265386128,52.7036655116835,33.4275827704358,23.0789507567735,24.37051088989,8.98819408654222,10.1584883441106,12.3467589417708,12.7077493638565,16.1090402779718,15.7790829942313,23.8272053579018,26.3775382547971,25.5995742599663,52.9289815730033,110.560000836722,146.16581562032,173.37301531013,320.761742508295,11.1786220829783,15.1350426237166,21.1370385641763,31.6461789366065,48.2354319504834,85.0450344949942,75.0886918746616,34.3726680763075,161.167549541404,171.084165767552,168.207708346164,253.998665915252,345.275326153702,327.579677091012,316.965393535732,3.32555742299888,9.09558776498327,8.63714375142737,8.65699937453459,6.10194645550105,4.18765643604539,4.04674189506223,1.95133647857799,3.62560831444239,6.64394068946325,7.49437412690189,5.57135270033509,4.31712454664739,3.47157740595628,3.01582567878545,4.35124547054968,15.2446924635901,12.417153583713,5.77982123956051,4.57125577709592,11.4754461763673,26.5094473564592,3.47059041357882,6.24701990874622,6.67812532971677,2.62865677747807,6.68396022247182,6.51076020814315,6.8817819284732,5.55286130031493,5.13874111330481,5.46246237917072,12.2068473279111,16.9162323483892,12.2165219515182,9.07335676348945,49.1157011857862,17.9657670754686,28.7207379116513,75.2534268226033,59.6509823619161,47.3450127833648,27.3933990758314,41.4428451604356,39.5712090007041,79.009189483954,78.0097703454991,76.3203020036583,11.234506989875,7.20244376125241,8.14959707831353,6.21577401591618,7.98031051390231,8.38333442729732,10.6956863391379,7.61162372786498,8.68285319835728,4.44847348814022,20.5091410191115,9.23363016472288,8.39615018818709,6.51379589224083,7.04296829618505,6.07321329056727,20.9866202373493,6.48988557036784,4.27177201994632,13.002372681683,9.07453184111587,3.95573759709851,3.00727300986255,5.0331198105435,9.00885678967433,7.55737842547753,7.32459861163446,8.59203556213602,10.7554237817586,12.6058069618646,18.2529025988844,12.7543860568826,15.940467153471,17.3975006836419,24.9613436290515,13.3495530411855,5.83267379813068,29.8242870281724,2.81846469342095,11.0642244072544,13.567596217482,11.2781689239548,9.68698676082983,15.0370951686793,13.0266534896787,12.7600297147071,7.02557607652263,4.34851417486811,6.04863013141517,2.52808896502543,13.7853146397312,16.639175060702,7.66532855568991,5.37080087002444,3.17890167650024,3.36547258655913,3.2491695978407,2.3222283488074,2.97206545954499,2.41982844328417,1.46186821109629,1.15454209968395,1.5193997283604,14.0572837841431,7.5475224147182,11.124518219575,7.55480773638353,7.72758376128762,7.13193406714492,8.05867146775966,5.35920947697665,25.0786052017682,3.3885110557024,4.14292712856459,3.43737308063638,5.32744865265431,8.90607275701835,6.7985450765073,6.07520250208625,5.40385443869065,6.34399372577886,5.1776031175182,7.47268902606072,5.98537310101547,10.0732827394939,11.1829089851415,19.4940241244024,22.9804385562518,17.1129980407244,22.6638562962784,19.8969909946925,20.2157769411038,16.9831130926461,16.0332390178165,14.7017166727715,16.9026402348855,15.0480928663707,13.8125170472091,14.9490780468864,17.9405575031246,23.0768104449852,20.019053138278,19.5435473859687,18.9899112590491,18.8364590058384,19.6217662453643,19.7629698872194,19.2075159914106,19.2074371516411,16.8364615320219,20.0990088491875,15.7119836064167,19.2188729361162,16.5487530390947,13.0953933814301,16.5782420068984,17.5545015992839,6.49507502638659,16.1412809827332,14.1814895671877,9.56441660344217,12.1325280515734,13.4483344659844
|short_description=p1@Pecr
}}

Latest revision as of 13:34, 1 October 2015

Short description:p1@Pecr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pecr_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000097698, ENSMUST00000134840_5end
EntrezGene:Pecr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pecr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.01
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.72
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.69
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A345.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.49
GP2+ M cell, pool1.CNhs13228.11845-124H912.63
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I27.97
Ileum epithelium, pool1.CNhs13199.10252-104B938.76
Ileum epithelium, pool2.CNhs13232.10253-104C122.68
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C816.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F531.77
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F628.09
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F733.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.93
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.59
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.23
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.31
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C87.49
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D94.92
Mouse Schwann, donor2.CNhs12573.11746-123F94.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7448.28
Mouse hepatocyte, donor1.CNhs13078.11714-123C4172.03
Mouse hepatocyte, donor3.CNhs12615.11637-122C8522.97
Mouse hepatocyte, donor6.CNhs13090.11822-124F4485.38
Mouse hepatocyte, donor8.CNhs13091.11824-124F6393.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7134.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6199.14
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D711.58
adrenal gland, embryo E14.CNhs11038.406-44C511.10
adrenal gland, embryo E16.CNhs11004.1254-43D610.35
adrenal gland, embryo E17.CNhs11043.1263-45I113.61
adrenal gland, embryo E18.CNhs11026.1262-18F514.17
adrenal gland, neonate N00.CNhs11191.1311-23C112.35
adrenal gland, neonate N25.CNhs11223.1377-27I318.60
amnion, adult pregnant day17.5.CNhs10488.583-22A820.27
aorta, adult.CNhs10498.46-23H123.86
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F58.90
bone (os femoris), neonate N16.CNhs11225.1525-43A69.28
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H79.96
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.34
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B25.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.72
epididymis, adult.CNhs10490.58-23B211.37
eyeball, adult.CNhs10484.31-12G419.15
eyeball, embryo E12.CNhs11016.345-16C610.41
eyeball, embryo E14.CNhs10521.399-16E211.04
eyeball, embryo E15.CNhs10593.426-16C96.48
eyeball, embryo E17.CNhs11023.1261-18D411.00
eyeball, neonate N00.CNhs11207.633-15C66.46
eyeball, neonate N01.CNhs11140.1532-43E78.07
eyeball, neonate N02.CNhs11205.1551-44G85.25
eyeball, neonate N16.CNhs11188.777-19A29.83
forelimb, embryo E11.CNhs10596.335-25E27.33
forelimb, embryo E12.CNhs10600.359-14H211.91
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A88.77
forelimb, embryo E15.CNhs11007.437-20E713.90
forelimb, embryo E17.CNhs10598.1517-43C49.75
forelimb, embryo E18.CNhs11008.1520-43B513.17
gonad, embryo E13.CNhs11044.1564-45I612.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.92
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.68
heart, embryo E11.CNhs10586.331-24E96.01
heart, embryo E12.CNhs11015.353-12F510.55
heart, embryo E13.CNhs11013.376-3I97.20
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C87.48
heart, embryo E16.CNhs11021.457-17C65.55
heart, embryo E17.CNhs11025.479-18E57.21
heart, embryo E18.CNhs11030.1283-20G39.12
heart, neonate N00.CNhs11213.639-21E39.81
heart, neonate N03.CNhs11221.1349-25I210.86
heart, neonate N10.CNhs11118.749-24G17.88
heart, neonate N16.CNhs11209.782-15G111.03
heart, neonate N20.CNhs11127.821-26I611.26
heart, neonate N25.CNhs11196.1351-25D314.93
heart, neonate N30.CNhs11202.1390-42D29.53
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G15.04
intestinal mucosa, adult.CNhs10506.860-29I37.27
intestine, adult.CNhs10496.178-9A315.60
intestine, embryo E12.CNhs11019.1251-16I511.52
intestine, embryo E13.CNhs11010.381-16D510.45
intestine, embryo E15.CNhs10602.976-16D810.18
intestine, embryo E16.CNhs10585.463-22H421.18
intestine, embryo E17.CNhs10582.482-18D334.69
intestine, embryo E18.CNhs10526.1289-20F741.28
intestine, neonate N00.CNhs11126.644-26D111.86
intestine, neonate N01.CNhs11192.1322-23E952.70
intestine, neonate N06.CNhs11102.688-20B833.43
intestine, neonate N07.CNhs11095.720-20F223.08
intestine, neonate N10.CNhs11098.755-23A524.37
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E310.16
intestine, neonate N30.CNhs11131.1384-42G112.35
kidney, embryo E14.CNhs10606.411-4I912.71
kidney, embryo E15.CNhs10997.434-16F816.11
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I223.83
kidney, embryo E18.CNhs11001.1288-20C726.38
kidney, neonate N00.CNhs11214.646-21G725.60
kidney, neonate N10.CNhs11206.758-6D552.93
kidney, neonate N20.CNhs11113.832-19I1110.56
kidney, neonate N25.CNhs11122.1353-25F3146.17
kidney, neonate N30.CNhs11203.1385-42H1173.37
liver, adult pregnant day01.CNhs10466.508-5B2320.76
liver, embryo E12.CNhs10601.355-15F811.18
liver, embryo E13.CNhs10524.378-3H615.14
liver, embryo E14.CNhs10594.409-16E121.14
liver, embryo E15.CNhs10520.433-16D731.65
liver, embryo E16.CNhs10523.462-17F548.24
liver, embryo E17.CNhs10510.481-18A385.05
liver, embryo E18.CNhs10579.499-43G475.09
liver, neonate N00.CNhs11117.641-24F434.37
liver, neonate N03.CNhs11123.1345-25G2161.17
liver, neonate N06.CNhs11101.684-20A8171.08
liver, neonate N07.CNhs11103.716-20H2168.21
liver, neonate N10.CNhs11115.751-24B9254.00
liver, neonate N20.CNhs11220.823-25A3345.28
liver, neonate N25.CNhs11198.1368-26H1327.58
liver, neonate N30.CNhs11106.1382-42D1316.97
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G29.10
lung, embryo E14.CNhs10604.404-26F88.64
lung, embryo E15.CNhs11020.432-17C58.66
lung, embryo E16.CNhs10998.458-17B66.10
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E67.49
lung, neonate N20.CNhs11109.822-18A45.57
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B615.24
mammary gland, adult pregnant day19.CNhs10476.588-5H212.42
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C226.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I712.21
ovary, embryo E18.CNhs11040.505-44H716.92
ovary, neonate N00.CNhs11217.1299-22I412.22
oviduct, adult pregnant day01.CNhs10500.988-6G69.07
pancreas, adult.CNhs10486.34-16E449.12
pancreas, embryo E14.CNhs11012.405-44F417.97
pancreas, embryo E15.CNhs11042.1556-45F228.72
pancreas, embryo E16.CNhs11003.460-26E575.25
pancreas, embryo E17.CNhs10599.1558-45G359.65
pancreas, embryo E18.CNhs10580.1535-43I747.35
pancreas, neonate N00.CNhs11105.645-26G927.39
pancreas, neonate N01.CNhs11138.1531-43D741.44
pancreas, neonate N02.CNhs11139.1539-43D839.57
pancreas, neonate N16.CNhs11136.787-43B679.01
pancreas, neonate N25.CNhs11094.1555-45E278.01
pancreas, neonate N30.CNhs11182.1548-44H576.32
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E67.20
pituitary gland, embryo E13.CNhs11009.370-44C78.15
pituitary gland, embryo E14.CNhs11037.398-44A56.22
pituitary gland, embryo E15.CNhs10592.427-16B97.98
pituitary gland, embryo E16.CNhs11036.449-43F68.38
pituitary gland, embryo E17.CNhs11039.1265-44F510.70
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I78.68
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F820.51
skin, adult.CNhs10492.30-1C39.23
skin, neonate N00.CNhs11124.650-25G48.40
skin, neonate N03.CNhs11215.662-22H36.51
skin, neonate N06.CNhs11097.693-20I57.04
skin, neonate N10.CNhs11108.762-6C46.07
small intestine, neonate N16.CNhs11114.790-21I120.99
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G24.27
spleen, embryo E16.CNhs11035.461-43C113.00
spleen, embryo E18.CNhs11011.1271-21F29.07
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.32
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E310.76
stomach, embryo E15.CNhs10603.1252-16G812.61
stomach, embryo E16.CNhs11022.459-17D418.25
stomach, embryo E17.CNhs11006.1035-18D512.75
stomach, embryo E18.CNhs10999.1286-20C615.94
stomach, neonate N03.CNhs11193.1340-24B817.40
stomach, neonate N07.CNhs11210.718-18A924.96
stomach, neonate N25.CNhs11104.1355-25E413.35
stomach, neonate N30.CNhs11134.1386-42I15.83
submandibular gland, adult.CNhs10469.59-29C129.82
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F511.06
testis, embryo E15.CNhs11034.443-27C513.57
testis, embryo E16.CNhs11033.470-26G511.28
testis, embryo E17.CNhs11029.486-18I59.69
testis, embryo E18.CNhs11027.503-18G515.04
testis, neonate N00.CNhs11189.1300-22B713.03
testis, neonate N07.CNhs11222.726-26I412.76
testis, neonate N10.CNhs11204.763-44D97.03
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E26.05
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I413.79
thymus, embryo E15.CNhs11005.430-45I216.64
thymus, embryo E16.CNhs11002.456-26C57.67
thymus, embryo E17.CNhs10581.478-18C15.37
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F83.37
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D32.97
thymus, neonate N10.CNhs11194.748-24E42.42
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B414.06
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.12
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.55
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F57.13
uterus, adult.CNhs10509.92-27E58.06
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F825.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I87.47
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H210.07
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B119.49
whole body, embryo E16.CNhs10514.453-14F222.98
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.90
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.03
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.02
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.84
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.21
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.58
whole body, embryo E17.5.CNhs10513.490-9F917.55
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B316.14
whole body, neonate N00.CNhs10525.657-19C214.18
whole body, neonate N01.CNhs10576.659-23C69.56
whole body, neonate N06.CNhs10515.692-21D112.13
whole body, neonate N10.CNhs10518.761-6B413.45





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland2.03e-1225
exocrine system2.03e-1225
abdomen element3.76e-1249
abdominal segment element3.76e-1249
abdominal segment of trunk3.76e-1249
abdomen3.76e-1249
liver6.48e-1222
epithelial sac6.48e-1222
digestive gland6.48e-1222
epithelium of foregut-midgut junction6.48e-1222
anatomical boundary6.48e-1222
hepatobiliary system6.48e-1222
foregut-midgut junction6.48e-1222
hepatic diverticulum6.48e-1222
liver primordium6.48e-1222
septum transversum6.48e-1222
liver bud6.48e-1222
digestive tract diverticulum9.73e-1123
sac9.73e-1123
mesenchyme1.83e-1061
entire embryonic mesenchyme1.83e-1061
trunk region element1.67e-0979
trunk1.35e-0790
trunk mesenchyme2.10e-0745
pancreas2.27e-0712
epithelial tube3.91e-0747
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