FFCP PHASE1:Mm9::chr1:74200555..74200577,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12765|HGNC=|MCL_coexpression_id=3|UniProt=P35343|association_with_transcript=0bp_to_ENSMUST00000027372,ENSMUST00000106899,NM_009909,uc007bll.1_5end|description=CAGE_peak_1_at_Cxcr2_5end|id=chr1:74200555..74200577,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,4.44e-08,6;CL:0000556,4.44e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.84e-08,6;UBERON:0004457,1.84e-08,6;UBERON:0000042,1.84e-08,6;UBERON:0004854,1.84e-08,6;UBERON:0009034,1.84e-08,6;UBERON:0002095,1.84e-08,6;UBERON:0004782,1.84e-08,6;UBERON:0003281,1.84e-08,6;UBERON:0009664,1.84e-08,6;UBERON:0002296,1.84e-08,6;UBERON:0005602,1.84e-08,6;UBERON:0001179,1.84e-08,6;UBERON:0006293,1.84e-08,6;UBERON:0005418,3.53e-07,5;UBERON:0002472,3.53e-07,5;UBERON:0008784,3.53e-07,5;UBERON:0006058,3.53e-07,5;UBERON:0004709,3.53e-07,5;UBERON:0002529,3.53e-07,5;UBERON:0010538,3.53e-07,5;UBERON:0005420,3.53e-07,5;UBERON:0010758,3.53e-07,5;UBERON:0000978,3.53e-07,5;UBERON:0002103,3.53e-07,5;UBERON:0000376,3.53e-07,5;UBERON:0000154,3.53e-07,5;UBERON:0010709,3.53e-07,5;UBERON:0005730,3.53e-07,5;UBERON:0009569,8.42e-07,66|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,4.33042690360362,9.31386229993199,1.39912375625629,10.4102514568218,5.48457734422955,8.91218268775863,1.7008658030214,0,0,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,844.178299196343,496.929279117137,568.546785955545,1112.93397535468,1102.43541272293,668.062245770867,0,0,0,0,0,0,0,0,0,0.671130424230945,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,5.75822122540183,0,0,0,0,0,0,0,0,0,0,2.62622923353838,32.3672354558965,0.445326417194474,0,0,0.691846491768175,1.05505848386836,0.940709657085638,0.376999773989026,272.161659475546,2.31358971071859,71.6534547079398,3.07357014900077,10.1587098491781,19.3950101254089,0,0,0,0.255457055208591,0.239630249011841,0.599902730993408,1.01656181658452,0.149790639404823,0,0.125654352112864,0,0,0,0.162241263067758,0.101839363850316,26.4986847399498,0,0,0.130120442962704,0,0,0,0.408218994907967,0,0.0937017245597288,0,0,0,0,0.219195732427575,0.278047249225598,0,0.61734640922383,0,0,0,0.284163499395593,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0.467061369468678,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0.219550115291051,0,0,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0.280543279561274,0,0,0,0.123397163921801,0.296452627087149,0.83422552858047,0.589676985339609,1.34917267430912,1.82574109249653,3.61765739628625,5.85639459097266,10.3570609482292,5.0261920300261,3.0201755450689,1.43768206527355,4.46569137202204,1.24815069245824,0.252578877947112,0.179397413521912,0.482443521363367,27.1587189544909,0,0.162964976442026,0.169745085775188,0.704070744865506,0.502518772325447,0.476087281772027,3.51240566144038,3.78324345854858,1.55025282754142,1.59454768657487,4.91589944147214,6.90739927463582,4.05017364028232,0,0,0.491764273019036,0.275936746304732,0,0,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.890328018336276,0.651547837414304,2.96946221350564,0,0,0,0.377210159511796,1.18120757152309,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.304464949114599,37.5474732901937,60.1603081253249,0,0.16488625294148,0.322928853391811,0.180938774784468,0.358117032009409,0.328281799490123,1.1659233465194,0.927126510052548,24.6054068348908,8.46186158649212,63.3365283604414,4.70921142511728,3.41735569302563,4.11800711771741,0,0.419854356970974,1.65839968565309,0.954670618015114,0.316335993581135,0.406638934253697,0.432021363287205,0.209088296014469,0.218362563746178,0.269728692769641,0.495920734352016,0.26175594198403,0,0,0,0,0.330916980914195,1.16670713006429,1.16243841129958,2.70329800785245,1.05621514781179,0.2604087696879,0,0,0,0.948033361884535,0.405450430580328,0.205421914329655,0.389762468933385,0.358053391334963,0.198681354781265,0.120195449519969,0,0.403865799792591,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.350630706544707,1.13365191807606,0.887943813496259,0.0897138566094757,9.23365390002431,0,1.68914227906064,0.73260649706906,22.0799430451438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.576226371643824,0.402048282689293,0.476293691283074,0.347652977834566,0,0.824171801606613,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.846984423737976,0.169229215783353,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0.394017929502254,0.409231043169689,0.154936841185966,2.12197272079256,0,3.27504251823572,2.36358159453128,2.48674831689496,3.97064554415128,5.56482805489012|short_description=p1@Cxcr2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12765 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=P35343 | |||
|association_with_transcript=0bp_to_ENSMUST00000027372,ENSMUST00000106899,NM_009909,uc007bll.1_5end | |||
|cluster_id=chr1:74200555..74200577,+ | |||
|description=CAGE_peak_1_at_Cxcr2_5end | |||
|id=chr1:74200555..74200577,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.44e-08,6;CL:0000556,4.44e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.84e-08,6;UBERON:0004457,1.84e-08,6;UBERON:0000042,1.84e-08,6;UBERON:0004854,1.84e-08,6;UBERON:0009034,1.84e-08,6;UBERON:0002095,1.84e-08,6;UBERON:0004782,1.84e-08,6;UBERON:0003281,1.84e-08,6;UBERON:0009664,1.84e-08,6;UBERON:0002296,1.84e-08,6;UBERON:0005602,1.84e-08,6;UBERON:0001179,1.84e-08,6;UBERON:0006293,1.84e-08,6;UBERON:0005418,3.53e-07,5;UBERON:0002472,3.53e-07,5;UBERON:0008784,3.53e-07,5;UBERON:0006058,3.53e-07,5;UBERON:0004709,3.53e-07,5;UBERON:0002529,3.53e-07,5;UBERON:0010538,3.53e-07,5;UBERON:0005420,3.53e-07,5;UBERON:0010758,3.53e-07,5;UBERON:0000978,3.53e-07,5;UBERON:0002103,3.53e-07,5;UBERON:0000376,3.53e-07,5;UBERON:0000154,3.53e-07,5;UBERON:0010709,3.53e-07,5;UBERON:0005730,3.53e-07,5;UBERON:0009569,8.42e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,4.33042690360362,9.31386229993199,1.39912375625629,10.4102514568218,5.48457734422955,8.91218268775863,1.7008658030214,0,0,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,844.178299196343,496.929279117137,568.546785955545,1112.93397535468,1102.43541272293,668.062245770867,0,0,0,0,0,0,0,0,0,0.671130424230945,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,5.75822122540183,0,0,0,0,0,0,0,0,0,0,2.62622923353838,32.3672354558965,0.445326417194474,0,0,0.691846491768175,1.05505848386836,0.940709657085638,0.376999773989026,272.161659475546,2.31358971071859,71.6534547079398,3.07357014900077,10.1587098491781,19.3950101254089,0,0,0,0.255457055208591,0.239630249011841,0.599902730993408,1.01656181658452,0.149790639404823,0,0.125654352112864,0,0,0,0.162241263067758,0.101839363850316,26.4986847399498,0,0,0.130120442962704,0,0,0,0.408218994907967,0,0.0937017245597288,0,0,0,0,0.219195732427575,0.278047249225598,0,0.61734640922383,0,0,0,0.284163499395593,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0.467061369468678,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0.219550115291051,0,0,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0.280543279561274,0,0,0,0.123397163921801,0.296452627087149,0.83422552858047,0.589676985339609,1.34917267430912,1.82574109249653,3.61765739628625,5.85639459097266,10.3570609482292,5.0261920300261,3.0201755450689,1.43768206527355,4.46569137202204,1.24815069245824,0.252578877947112,0.179397413521912,0.482443521363367,27.1587189544909,0,0.162964976442026,0.169745085775188,0.704070744865506,0.502518772325447,0.476087281772027,3.51240566144038,3.78324345854858,1.55025282754142,1.59454768657487,4.91589944147214,6.90739927463582,4.05017364028232,0,0,0.491764273019036,0.275936746304732,0,0,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.890328018336276,0.651547837414304,2.96946221350564,0,0,0,0.377210159511796,1.18120757152309,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.304464949114599,37.5474732901937,60.1603081253249,0,0.16488625294148,0.322928853391811,0.180938774784468,0.358117032009409,0.328281799490123,1.1659233465194,0.927126510052548,24.6054068348908,8.46186158649212,63.3365283604414,4.70921142511728,3.41735569302563,4.11800711771741,0,0.419854356970974,1.65839968565309,0.954670618015114,0.316335993581135,0.406638934253697,0.432021363287205,0.209088296014469,0.218362563746178,0.269728692769641,0.495920734352016,0.26175594198403,0,0,0,0,0.330916980914195,1.16670713006429,1.16243841129958,2.70329800785245,1.05621514781179,0.2604087696879,0,0,0,0.948033361884535,0.405450430580328,0.205421914329655,0.389762468933385,0.358053391334963,0.198681354781265,0.120195449519969,0,0.403865799792591,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.350630706544707,1.13365191807606,0.887943813496259,0.0897138566094757,9.23365390002431,0,1.68914227906064,0.73260649706906,22.0799430451438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.576226371643824,0.402048282689293,0.476293691283074,0.347652977834566,0,0.824171801606613,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.846984423737976,0.169229215783353,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0.394017929502254,0.409231043169689,0.154936841185966,2.12197272079256,0,3.27504251823572,2.36358159453128,2.48674831689496,3.97064554415128,5.56482805489012 | |||
|short_description=p1@Cxcr2 | |||
}} |
Latest revision as of 14:18, 1 October 2015
Short description: | p1@Cxcr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cxcr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000027372, ENSMUST00000106899, NM_009909, uc007bll.1_5end |
EntrezGene: | Cxcr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.44e-08 | 6 |
megakaryocyte | 4.44e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.84e-08 | 6 |
cavity lining | 1.84e-08 | 6 |
serous membrane | 1.84e-08 | 6 |
gastrointestinal system mesentery | 1.84e-08 | 6 |
stomach region | 1.84e-08 | 6 |
mesentery | 1.84e-08 | 6 |
gastrointestinal system serosa | 1.84e-08 | 6 |
mesentery of stomach | 1.84e-08 | 6 |
gut mesentery | 1.84e-08 | 6 |
dorsal mesentery | 1.84e-08 | 6 |
dorsal mesogastrium | 1.84e-08 | 6 |
peritoneal cavity | 1.84e-08 | 6 |
spleen primordium | 1.84e-08 | 6 |
hindlimb bud | 3.53e-07 | 5 |
stylopod | 3.53e-07 | 5 |
lower limb segment | 3.53e-07 | 5 |
multi-limb segment region | 3.53e-07 | 5 |
pelvic appendage | 3.53e-07 | 5 |
limb segment | 3.53e-07 | 5 |
paired limb/fin segment | 3.53e-07 | 5 |
pelvic appendage bud | 3.53e-07 | 5 |
subdivision of organism along appendicular axis | 3.53e-07 | 5 |
leg | 3.53e-07 | 5 |
hindlimb | 3.53e-07 | 5 |
hindlimb stylopod | 3.53e-07 | 5 |
posterior region of body | 3.53e-07 | 5 |
pelvic complex | 3.53e-07 | 5 |
hindlimb/pelvic fin field | 3.53e-07 | 5 |
subdivision of trunk | 8.42e-07 | 66 |