FFCP PHASE1:Hg19::chr6:70576319..70576330,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1310 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2196 | |||
|TSSclassifier=strong | |||
|UniProt=Q14993 | |||
|association_with_transcript=-117bp_to_NM_001858,uc003pfc.1_5end | |||
|cluster_id=chr6:70576319..70576330,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_3_at_COL19A1_5end | |||
|id=chr6:70576319..70576330,+ | |||
|ontology_enrichment_celltype=CL:0000945!5.82e-34!24;CL:0000826!5.82e-34!24;CL:0000236!8.92e-30!14;CL:0000080!4.77e-17!6;CL:0000542!2.55e-16!53;CL:0000051!2.55e-16!53;CL:0000838!7.22e-15!52;CL:0000842!6.30e-09!3;CL:0002087!2.12e-07!119;CL:0000224!8.63e-07!4;CL:0000785!8.96e-07!2;CL:0000955!8.96e-07!2;CL:0000818!8.96e-07!2;CL:0000954!8.96e-07!2;CL:0000816!8.96e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.68e-99;24!CL:0000236;2.81e-71;13!CL:0000542;5.87e-28;53!CL:0000946;1.05e-10;1!CL:0000786;1.05e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.31e-99,24;CL:0000826,9.31e-99,24;CL:0000236,9.82e-80,14;CL:0000838,2.31e-44,52;CL:0000542,1.76e-43,53;CL:0000051,1.76e-43,53;CL:0002087,1.53e-18,115;CL:0002031,1.13e-17,120;CL:0000738,2.60e-15,136;CL:0000988,7.97e-13,177;CL:0002032,1.50e-12,161;CL:0000837,1.50e-12,161;CL:0000037,6.34e-12,168;CL:0000946,1.21e-10,1;CL:0000786,1.21e-10,1;CL:0000980,1.21e-10,1 | |||
|ontology_enrichment_development_v019=CL:0000051;5.87e-28;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;1.05e-10;1!DOID:0070004;1.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.46e-10,1;DOID:0070004,1.46e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.11e-22!32;UBERON:0001893!4.08e-21!34;UBERON:0002619!1.93e-20!22;UBERON:0002791!2.94e-19!33;UBERON:0002780!5.81e-19!41;UBERON:0001890!5.81e-19!41;UBERON:0006240!5.81e-19!41;UBERON:0002020!1.39e-18!34;UBERON:0003528!1.39e-18!34;UBERON:0003080!2.09e-18!42;UBERON:0000956!1.09e-17!25;UBERON:0000203!1.09e-17!25;UBERON:0001950!1.95e-16!20;UBERON:0001049!1.33e-15!57;UBERON:0005068!1.33e-15!57;UBERON:0006241!1.33e-15!57;UBERON:0007135!1.33e-15!57;UBERON:0002616!6.65e-15!59;UBERON:0007023!8.11e-15!115;UBERON:0000955!8.76e-12!69;UBERON:0006238!8.76e-12!69;UBERON:0000178!2.50e-11!15;UBERON:0000179!2.50e-11!15;UBERON:0000463!2.50e-11!15;UBERON:0003056!2.61e-11!61;UBERON:0001017!2.33e-10!82;UBERON:0005743!1.20e-09!86;UBERON:0002021!3.28e-09!5;UBERON:0002346!3.57e-09!90;UBERON:0002771!6.85e-09!3;UBERON:0002106!9.82e-09!3;UBERON:0004854!9.82e-09!3;UBERON:0009034!9.82e-09!3;UBERON:0002095!9.82e-09!3;UBERON:0004782!9.82e-09!3;UBERON:0003281!9.82e-09!3;UBERON:0009664!9.82e-09!3;UBERON:0002296!9.82e-09!3;UBERON:0005602!9.82e-09!3;UBERON:0001179!9.82e-09!3;UBERON:0006293!9.82e-09!3;UBERON:0003075!1.07e-08!86;UBERON:0007284!1.07e-08!86;UBERON:0000073!2.81e-08!94;UBERON:0001016!2.81e-08!94;UBERON:0000200!1.16e-07!6 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3789717311681,11.5761831124424,13.2234112606981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82297027883492,3.55803701545422,2.13365111283254,1.60158394814405,1.14950487990897,1.32208974556972,1.90810750907073,6.26134266020393,1.17447437874188,3.82273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64544909234478,0,0,0.79312517629427,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0,4.4310529965985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0.442317039724898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.889563386041866,0.617819694732514,1.25306339406546,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.607495566580247,0,0.157611414598396,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,1.20550485762571,0,0,0,0,0,0,0,0,0,0,1.98297222814403,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0.227662191351298,0,1.26757386311357,0.171488009437418,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.257831551894309,0.199882311849858,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@COL19A1 | |||
}} |
Latest revision as of 15:16, 19 September 2015
Short description: | p3@COL19A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COL19A1_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -117bp_to_NM_001858, uc003pfc.1_5end |
EntrezGene: | COL19A1 |
HGNC: | 2196 |
UniProt: | Q14993 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.31e-99 | 24 |
pro-B cell | 9.31e-99 | 24 |
B cell | 9.82e-80 | 14 |
lymphoid lineage restricted progenitor cell | 2.31e-44 | 52 |
lymphocyte | 1.76e-43 | 53 |
common lymphoid progenitor | 1.76e-43 | 53 |
nongranular leukocyte | 1.53e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.13e-17 | 120 |
leukocyte | 2.60e-15 | 136 |
hematopoietic cell | 7.97e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.50e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-12 | 161 |
hematopoietic stem cell | 6.34e-12 | 168 |
antibody secreting cell | 1.21e-10 | 1 |
plasma cell | 1.21e-10 | 1 |
plasmablast | 1.21e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.46e-10 | 1 |
myeloma | 1.46e-10 | 1 |