FFCP PHASE1:Mm9::chr2:29658353..29658375,+: Difference between revisions
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{{FFCP|EntrezGene=26569|HGNC=|MCL_coexpression_id=24|UniProt=A2ARC5,Q91VE0|association_with_transcript=153bp_to_NM_011989,uc008jaf.1_5end|description=CAGE_peak_3_at_Slc27a4_5end|id=chr2:29658353..29658375,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,2.38e-09,6;CL:0000677,2.38e-09,6;CL:0000584,2.38e-09,6;CL:0000075,7.96e-08,7;CL:0002563,1.96e-07,9;CL:0002251,1.96e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.45e-10!15;UBERON:0005409!1.58e-09!59;UBERON:0000160!5.45e-09!43;UBERON:0001242!7.51e-09!13;UBERON:0000060!7.51e-09!13;UBERON:0001262!7.51e-09!13;UBERON:0004786!7.51e-09!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.48e-25,31;UBERON:0005409,5.25e-22,47;UBERON:0000344,6.31e-15,15;UBERON:0001242,1.96e-12,13;UBERON:0001262,1.96e-12,13;UBERON:0004786,1.96e-12,13;UBERON:0004923,7.88e-08,24;UBERON:0003350,1.96e-07,9;UBERON:0004808,1.96e-07,9;UBERON:0001277,1.96e-07,9;UBERON:0001007,3.16e-07,116;UBERON:0001555,3.16e-07,116;UBERON:0007026,3.16e-07,116;UBERON:0004119,6.20e-07,118;UBERON:0000925,6.20e-07,118;UBERON:0006595,6.20e-07,118|phase1_expression=0.160148847104794,607.566184700128,469.104215810612,577.706643596045,678.212818347354,16.1164101035414,16.5864974822823,0.387369970324729,1.12630977721333,1.87251621057595,0,0,0,0.174840804837995,0,0,0,0,0,0,0.255129870453209,0,0,85.5959461944726,95.4342609239427,322.718363832641,189.535278309993,145.874024528347,159.239625504441,138.112511108442,92.2398924326068,0,0,0,0.577703239502549,2.49351968037739,0.816677425049476,8.78916424547506,3.1253413780952,4.18818995179039,11.7646297606203,9.56263678941824,5.34061388334269,0.251793635951155,0.202753862439029,0.367093504323363,0,0.218025156380447,0,0,0.279972843250725,1.43752564364972,0,1.45072428402269,0.336093799142464,0.514518872071894,0.286533439938757,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0.210324961351382,3.14216082844184,1.54607978666129,0.244981598429908,0,0,0,0.766124028511126,0.46081959976873,0.131886287730194,0.274462930807229,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.854230084794618,0.931997229126503,0.075726193333184,0.151143120213571,0,0.860423876981386,0.679971333707751,0,0.649776417447669,0.896053774194671,8.14577636764161,0,0,0.35333957451034,0,0,0,0,0.216491041011214,0,0,18.8403401536449,0,0.148442139064825,0.520455980298408,0.913396434936424,0.691846491768175,0.301445281105245,0.470354828542819,0.376999773989026,0,0.144599356919912,0.884610551949874,0,0,0.484875253135222,5.59175283654366,0,0,123.38575766575,0,0,0.127070227073065,0,0,0.125654352112864,0.521472960576829,0,0.20778804455956,0.486723789203273,0.407357455401265,0,0.758168275301024,59.1341615040992,0,0,0,0.30140963567143,0.136072998302656,0,0.0937017245597288,20.6962696591213,0,0,0,0,0.278047249225598,3.83077383174383,2.88094990971121,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0.465067889500816,0.268273401399619,0.116765342367169,0,0.32833492815819,0.0810688095458557,0,0,0,0,0,378.990344082416,84.3597307656706,0.213288250535234,0.232236671860439,0.128867461322093,2.42020229548011,5.55945109612176,7.22857379227725,75.4501207855773,10.0466362381647,9.55073793441024,7.36138946552258,7.40863531052657,66.5126362404124,70.8932803588997,60.1406645228189,0.189667900953082,0,0,0,0.387904974335251,0.0701358198903186,0,0,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0,0,0.252578877947112,0.179397413521912,0.964887042726734,0,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0.81931657357869,0,0,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0.295301892880773,0,1.03371317267288,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,17.1481703059139,3.71368181400583,6.93598636673792,13.130957840345,16.4140899745061,34.1032578856925,1.11255181206306,0.170870880797853,0.412773735926445,0.370389054739423,0,0,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0.158167996790568,0,0.648032044930808,3.13632444021703,4.58561383866973,2.83215127408124,2.0663363931334,4.71160695571253,4.66613903850454,0,0,0.448549638131936,0,0.583353565032143,0.258319646955462,0.506868376472335,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.292373642219257,0,0,4.0811469050738,0,0,0,1.15913756419314,0,0,14.1483130192183,0,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0.341467211508268,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0.64183841918363,1.76888048234658,0.760437899670719,0.754505365544305,0.655490552289177,0.640251524048693,0.574354689556133,0.952587382566147,0.463537303779422,0.38581844092741,0.824171801606613,0.294397840268795,1.02860775715625,1.06485483695602,0.715308569841963,0.581385666529314,0.846984423737976,1.09998990259179,0.73171189149109,0.526139422875686,0.950628796921032,0.561142271657738,1.06771516311757,0.689531376628944,0.409231043169689,1.23949472948773,1.35034627686799,3.2475375131933,1.63752125911786,1.93383948643468,0.765153328275374,1.54413993383661,0.231867835620421|short_description=p3@Slc27a4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26569 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=A2ARC5,Q91VE0 | |||
|association_with_transcript=153bp_to_NM_011989,uc008jaf.1_5end | |||
|cluster_id=chr2:29658353..29658375,+ | |||
|description=CAGE_peak_3_at_Slc27a4_5end | |||
|id=chr2:29658353..29658375,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.38e-09,6;CL:0000677,2.38e-09,6;CL:0000584,2.38e-09,6;CL:0000075,7.96e-08,7;CL:0002563,1.96e-07,9;CL:0002251,1.96e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.45e-10!15;UBERON:0005409!1.58e-09!59;UBERON:0000160!5.45e-09!43;UBERON:0001242!7.51e-09!13;UBERON:0000060!7.51e-09!13;UBERON:0001262!7.51e-09!13;UBERON:0004786!7.51e-09!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.48e-25,31;UBERON:0005409,5.25e-22,47;UBERON:0000344,6.31e-15,15;UBERON:0001242,1.96e-12,13;UBERON:0001262,1.96e-12,13;UBERON:0004786,1.96e-12,13;UBERON:0004923,7.88e-08,24;UBERON:0003350,1.96e-07,9;UBERON:0004808,1.96e-07,9;UBERON:0001277,1.96e-07,9;UBERON:0001007,3.16e-07,116;UBERON:0001555,3.16e-07,116;UBERON:0007026,3.16e-07,116;UBERON:0004119,6.20e-07,118;UBERON:0000925,6.20e-07,118;UBERON:0006595,6.20e-07,118 | |||
|phase1_expression=0.160148847104794,607.566184700128,469.104215810612,577.706643596045,678.212818347354,16.1164101035414,16.5864974822823,0.387369970324729,1.12630977721333,1.87251621057595,0,0,0,0.174840804837995,0,0,0,0,0,0,0.255129870453209,0,0,85.5959461944726,95.4342609239427,322.718363832641,189.535278309993,145.874024528347,159.239625504441,138.112511108442,92.2398924326068,0,0,0,0.577703239502549,2.49351968037739,0.816677425049476,8.78916424547506,3.1253413780952,4.18818995179039,11.7646297606203,9.56263678941824,5.34061388334269,0.251793635951155,0.202753862439029,0.367093504323363,0,0.218025156380447,0,0,0.279972843250725,1.43752564364972,0,1.45072428402269,0.336093799142464,0.514518872071894,0.286533439938757,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0.210324961351382,3.14216082844184,1.54607978666129,0.244981598429908,0,0,0,0.766124028511126,0.46081959976873,0.131886287730194,0.274462930807229,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.854230084794618,0.931997229126503,0.075726193333184,0.151143120213571,0,0.860423876981386,0.679971333707751,0,0.649776417447669,0.896053774194671,8.14577636764161,0,0,0.35333957451034,0,0,0,0,0.216491041011214,0,0,18.8403401536449,0,0.148442139064825,0.520455980298408,0.913396434936424,0.691846491768175,0.301445281105245,0.470354828542819,0.376999773989026,0,0.144599356919912,0.884610551949874,0,0,0.484875253135222,5.59175283654366,0,0,123.38575766575,0,0,0.127070227073065,0,0,0.125654352112864,0.521472960576829,0,0.20778804455956,0.486723789203273,0.407357455401265,0,0.758168275301024,59.1341615040992,0,0,0,0.30140963567143,0.136072998302656,0,0.0937017245597288,20.6962696591213,0,0,0,0,0.278047249225598,3.83077383174383,2.88094990971121,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0.465067889500816,0.268273401399619,0.116765342367169,0,0.32833492815819,0.0810688095458557,0,0,0,0,0,378.990344082416,84.3597307656706,0.213288250535234,0.232236671860439,0.128867461322093,2.42020229548011,5.55945109612176,7.22857379227725,75.4501207855773,10.0466362381647,9.55073793441024,7.36138946552258,7.40863531052657,66.5126362404124,70.8932803588997,60.1406645228189,0.189667900953082,0,0,0,0.387904974335251,0.0701358198903186,0,0,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,0,0,0.252578877947112,0.179397413521912,0.964887042726734,0,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0.81931657357869,0,0,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0.295301892880773,0,1.03371317267288,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,17.1481703059139,3.71368181400583,6.93598636673792,13.130957840345,16.4140899745061,34.1032578856925,1.11255181206306,0.170870880797853,0.412773735926445,0.370389054739423,0,0,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0.158167996790568,0,0.648032044930808,3.13632444021703,4.58561383866973,2.83215127408124,2.0663363931334,4.71160695571253,4.66613903850454,0,0,0.448549638131936,0,0.583353565032143,0.258319646955462,0.506868376472335,0,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.292373642219257,0,0,4.0811469050738,0,0,0,1.15913756419314,0,0,14.1483130192183,0,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0.341467211508268,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0.64183841918363,1.76888048234658,0.760437899670719,0.754505365544305,0.655490552289177,0.640251524048693,0.574354689556133,0.952587382566147,0.463537303779422,0.38581844092741,0.824171801606613,0.294397840268795,1.02860775715625,1.06485483695602,0.715308569841963,0.581385666529314,0.846984423737976,1.09998990259179,0.73171189149109,0.526139422875686,0.950628796921032,0.561142271657738,1.06771516311757,0.689531376628944,0.409231043169689,1.23949472948773,1.35034627686799,3.2475375131933,1.63752125911786,1.93383948643468,0.765153328275374,1.54413993383661,0.231867835620421 | |||
|short_description=p3@Slc27a4 | |||
}} |
Latest revision as of 12:37, 26 September 2015
Short description: | p3@Slc27a4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc27a4_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 153bp_to_NM_011989, uc008jaf.1_5end |
EntrezGene: | Slc27a4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.38e-09 | 6 |
gut absorptive cell | 2.38e-09 | 6 |
enterocyte | 2.38e-09 | 6 |
columnar/cuboidal epithelial cell | 7.96e-08 | 7 |
intestinal epithelial cell | 1.96e-07 | 9 |
epithelial cell of alimentary canal | 1.96e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.48e-25 | 31 |
gastrointestinal system | 5.25e-22 | 47 |
mucosa | 6.31e-15 | 15 |
intestinal mucosa | 1.96e-12 | 13 |
wall of intestine | 1.96e-12 | 13 |
gastrointestinal system mucosa | 1.96e-12 | 13 |
organ component layer | 7.88e-08 | 24 |
epithelium of mucosa | 1.96e-07 | 9 |
gastrointestinal system epithelium | 1.96e-07 | 9 |
intestinal epithelium | 1.96e-07 | 9 |
digestive system | 3.16e-07 | 116 |
digestive tract | 3.16e-07 | 116 |
primitive gut | 3.16e-07 | 116 |
endoderm-derived structure | 6.20e-07 | 118 |
endoderm | 6.20e-07 | 118 |
presumptive endoderm | 6.20e-07 | 118 |