FFCP PHASE1:Hg19::chr7:142494356..142494390,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12170 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000390414,uc003wbh.3_5end | |||
|cluster_id=chr7:142494356..142494390,+ | |||
|coexpression_cluster_id=C861 | |||
|description=CAGE_peak_1_at_TRBJ2-2P_5end | |||
|id=chr7:142494356..142494390,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.59e-21!53;CL:0000051!1.59e-21!53;CL:0000838!8.07e-21!52;CL:0000084!1.98e-13!25;CL:0000827!1.98e-13!25;CL:0000791!7.43e-13!18;CL:0000789!7.43e-13!18;CL:0002420!7.43e-13!18;CL:0002419!7.43e-13!18;CL:0000790!7.43e-13!18;CL:0002087!5.98e-11!119;CL:0000738!2.21e-10!140;CL:0000236!1.27e-09!14;CL:0000625!9.50e-09!11;CL:0002031!1.58e-08!124;CL:0000945!3.88e-07!24;CL:0000826!3.88e-07!24;CL:0000037!9.51e-07!172;CL:0000566!9.51e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.83e-17;25!CL:0000542;7.15e-17;53!CL:0000791;3.96e-16;18!CL:0000789;3.96e-16;18!CL:0002419;3.96e-16;18!CL:0000236;1.50e-11;13!CL:0000625;7.62e-11;11!CL:0000945;2.89e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.92e-28,53;CL:0000051,1.92e-28,53;CL:0000838,1.59e-27,52;CL:0000084,2.05e-17,25;CL:0000827,2.05e-17,25;CL:0000791,4.38e-16,18;CL:0000789,4.38e-16,18;CL:0002420,4.38e-16,18;CL:0002419,4.38e-16,18;CL:0000790,4.38e-16,18;CL:0000236,3.00e-12,14;CL:0000625,8.34e-11,11;CL:0002087,2.32e-10,115;CL:0000945,2.97e-09,24;CL:0000826,2.97e-09,24;CL:0000738,7.84e-09,136;CL:0002031,6.11e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;7.15e-17;53!CL:0000790;3.96e-16;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.31e-08!115;UBERON:0003081!9.71e-08!216;UBERON:0004535!2.03e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.92e-07;15!UBERON:0000179;1.92e-07;15!UBERON:0000463;1.92e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.44e-08,109;UBERON:0001009,1.44e-07,112;UBERON:0000178,1.97e-07,15;UBERON:0000179,1.97e-07,15;UBERON:0000463,1.97e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,26.7849990786645,24.423040879035,21.6256958408871,20.0462903453625,0,0,0,0,0,0,1.47745269692145,13.668046313365,0,0,0.136874425072884,0,11.4620108621927,12.3150884174919,12.3575926662476,26.3554065488766,10.747223146722,17.1845896880844,0,0,0,0,25.1639541502736,24.6624369041272,10.5259127621057,7.42014455639524,9.33146744078163,1.56740831967947,5.83008598834163,0.515151135268373,0.145398238779565,1.13362783106643,0.242584061187816,0.464858073811369,1.6446715520873,0.309706370895104,0.28769239232215,1.0246428261164,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,1.09162460023138,0.449446968890169,0.612167784741805,2.24650318953266,0,0,0.797854630486527,0,0,2.26954089876456,0.622822248995575,0.502497330513487,0.521482918420201,0.217188844705117,0.605399502633369,0.736555271975129,0.949387162322653,0,0,0,0,0,0,0.285012743741249,0,0,114.39755889986,89.5667322469896,110.299147479081,102.415253415962,110.909688408975,81.6148464735366,104.445089900008,97.3134829626071,34.7219911156764,45.8045007709332,29.8173117937679,26.4342657158052,14.5732226375199,10.271979306228,10.2289080459193,20.8295704257057,15.4201124249632,30.0935691703221,30.6366930635575,27.4599727326145,54.5514839542152,35.3171148326,40.0664034165779,44.5283128113078,31.6840520605068,26.7710858226661,22.7603858229787,25.3234373089661,23.4897515117971,27.53129314483,25.6535754270365,19.2629396224593,22.9978152370949,26.6276955339281,24.142891096921,31.2700975389193,25.3019692019503,36.9535880615952,45.5758417699493,41.8198899557285,38.8483807220654,44.9233005152009,26.2354525759926,23.4409479523577,38.5930158552892,35.6843935507776,34.4997852560724,12.0204255222723,0,0,0,0,0,0,0,0,0.567208902984407,5.76496433402666,14.668409210752,1.30979075497713,0,0,0.324547393654683,0.348259474598534,0.664789802594326,0.476981248610684,0.571994910780128,1.11437250398869,3.57772333260069,5.16140757063675,13.5384795626962,6.21838736116411,15.1019797035566,5.50236083880135,3.34391946458897,0,0,0,0,0,0,6.61793544622564,0.81014194788176,5.98308179503334,4.4905874525234,7.54496919238259,7.66583187329416,9.49265659568129,12.6409203311981,2.63560834872127,0,0,0,10.3837019564955,0.132409180813219,1.14734648299525,8.15737279056221,1.68203280042692,0,0,1.24484414159907,1.48181739276657,1.79808093424805,4.8434376846378,1.72852777344,11.0131072961884,0,2.2818872861778,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,26.3946794962028,20.1213079708547,0,0,0,0,0,0,3.17610112848059,0,0,0,0,0,0,0,0,0,0,0,0.646584227275248,0,0,2.88253006927829,0.386521706326594,0,0,0.731842236777572,0.397589304964456,0.464775771478074,0.310983165046111,2.01856680700503,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.8231480226628,1.47008711385542,0,1.96565443335525,0,0,0,0.686271241194102,0.109750285408626,0,0,0,13.032332212413,3.11980435583874,10.1031939417691,0.115930404975077,5.4007999348478,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0.829312462163088,0.144119953416961,0.37872730027914,0,0,0,1.71072446022705,0,0,0,0.336393253036082,1.74384027533312,0.36669142910475,0.775630294546667,0,0,4.25500986535793,5.2003718455683,0,1.41849132023278,0,0.285955987316295,26.5884586641807,18.9345277459577,0,0,25.3424599338697,0,0.871533458600294,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0,0,72.4070030198186,48.0755054892702,59.0819555115077,35.8077071220498,0,0,1.54657762555539,2.34522771468088,1.91381625495949,0,0,2.48649308061621,0.12269149171914,2.00068208423871,0.271265023699736,0,0,0,0,0,0,0,1.99267679560631,1.84369168541703,0.260650843404249,0.979005787313703,1.37257369524342,13.6466897241106,13.1585662499356,17.9302297109786,3.33440328590885,43.2732142727292,13.6075631998356,0,0,0,0,0,0.160853921143607,0,1.23367755042124,0.177561725313127,0.410635780069046,1.03850885836724,0.348631135379878,0,0.802025881213139,0.0920809889358963,6.42960909721798,4.37018803216121,0,3.60959690325929,1.46329140498388,7.84349769176855,4.38417673959782,2.00548094896464,0,0.340187410553031,1.72732732881711,0,5.41892875087706,2.50844886927427,7.13653564526107,6.64860807142979,4.02974558499921,0.657779629937804,0.261435451024901,0.256450125116389,0.656029291399411,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0.429680979473094,0.435050081742686,0.596586391912706,0,0.826424576804891,2.69066094311149,0.127612712494584,0.2023155617111,1.85938219718914,0,2.0911118104818,0.616067160352178,7.98459045475533,1.73986598415015,0,2.14687330112987,1.116475108079,12.655176988749,0.190630193923825,5.11795582622668,1.71175595213568,1.59101623962968,1.56989728039846,3.05783177891635,4.11805544604082,4.59468369148177,6.87420437349274,1.58510321173008,0.842516912477962,4.8763373908959,0,0,16.9259890145902,2.96951407102797,0,1.10273068709225,0.66343897524122,0.876901770507525,7.52408194546694,9.83842128069949,0,8.36523444869325,12.6763021139509,30.4032066672589,12.968873413732,0.7133421029625,11.7071151143297,0.4222152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| |||
|short_description=p1@TRBJ2-2P | |||
}} |
Latest revision as of 21:31, 16 September 2015
Short description: | p1@TRBJ2-2P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRBJ2-2P_5end |
Coexpression cluster: | C861_CD19_chronic_NK_Natural_lymphangiectasia_acute_CD8 |
Association with transcript: | 0bp_to_ENST00000390414, uc003wbh.3_5end |
EntrezGene: | NA |
HGNC: | 12170 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.92e-28 | 53 |
common lymphoid progenitor | 1.92e-28 | 53 |
lymphoid lineage restricted progenitor cell | 1.59e-27 | 52 |
T cell | 2.05e-17 | 25 |
pro-T cell | 2.05e-17 | 25 |
mature alpha-beta T cell | 4.38e-16 | 18 |
alpha-beta T cell | 4.38e-16 | 18 |
immature T cell | 4.38e-16 | 18 |
mature T cell | 4.38e-16 | 18 |
immature alpha-beta T cell | 4.38e-16 | 18 |
B cell | 3.00e-12 | 14 |
CD8-positive, alpha-beta T cell | 8.34e-11 | 11 |
nongranular leukocyte | 2.32e-10 | 115 |
lymphocyte of B lineage | 2.97e-09 | 24 |
pro-B cell | 2.97e-09 | 24 |
leukocyte | 7.84e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 6.11e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.44e-08 | 109 |
circulatory system | 1.44e-07 | 112 |
blood | 1.97e-07 | 15 |
haemolymphatic fluid | 1.97e-07 | 15 |
organism substance | 1.97e-07 | 15 |