FFCP PHASE1:Mm9::chr2:31305411..31305419,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=114|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:31305411..31305419,+|id=chr2:31305411..31305419,+|ontology_enrichment_celltype=CL:0000107!1.30e-42!9;CL:0000540!4.54e-11!33;CL:0000047!4.54e-11!33;CL:0000031!4.54e-11!33;CL:0000404!4.54e-11!33;CL:0000393!3.11e-09!39;CL:0000211!3.11e-09!39;CL:0002319!2.72e-08!43;CL:0000221!4.40e-08!44;CL:0000133!4.40e-08!44;CL:0000055!5.28e-07!50|ontology_enrichment_celltype_v019_2=CL:0000107,4.97e-77,9;CL:0000540,3.59e-21,33;CL:0000047,3.59e-21,33;CL:0000031,3.59e-21,33;CL:0000404,3.59e-21,33;CL:0000393,6.32e-18,39;CL:0000211,6.32e-18,39;CL:0002319,2.91e-16,43;CL:0000221,6.80e-16,44;CL:0000133,6.80e-16,44;CL:0002321,5.63e-10,70;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!1.30e-42!9;UBERON:0000010!9.47e-35!11;UBERON:0002005!2.59e-19!3;UBERON:0005428!2.59e-19!3;UBERON:0000013!5.95e-19!3;UBERON:0000011!6.48e-09!3|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.97e-77,9;UBERON:0000010,4.29e-63,11;UBERON:0010313,6.12e-34,3;UBERON:0002342,6.12e-34,3;UBERON:0002005,6.12e-34,3;UBERON:0005428,6.12e-34,3;UBERON:0005062,6.12e-34,3;UBERON:0000013,2.80e-33,3;UBERON:0000011,3.36e-15,3;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73262329124385,7.02789739733949,4.09304455692318,4.06246956519338,2.67358408898873,0,3.64329631507405,4.09158201075837,5.92931666919785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:31305411..31305419,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:31305411..31305419,+ | |||
|description=CAGE_peak_at_chr2:31305411..31305419,+ | |||
|id=chr2:31305411..31305419,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.30e-42!9;CL:0000540!4.54e-11!33;CL:0000047!4.54e-11!33;CL:0000031!4.54e-11!33;CL:0000404!4.54e-11!33;CL:0000393!3.11e-09!39;CL:0000211!3.11e-09!39;CL:0002319!2.72e-08!43;CL:0000221!4.40e-08!44;CL:0000133!4.40e-08!44;CL:0000055!5.28e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.97e-77,9;CL:0000540,3.59e-21,33;CL:0000047,3.59e-21,33;CL:0000031,3.59e-21,33;CL:0000404,3.59e-21,33;CL:0000393,6.32e-18,39;CL:0000211,6.32e-18,39;CL:0002319,2.91e-16,43;CL:0000221,6.80e-16,44;CL:0000133,6.80e-16,44;CL:0002321,5.63e-10,70;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!1.30e-42!9;UBERON:0000010!9.47e-35!11;UBERON:0002005!2.59e-19!3;UBERON:0005428!2.59e-19!3;UBERON:0000013!5.95e-19!3;UBERON:0000011!6.48e-09!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.97e-77,9;UBERON:0000010,4.29e-63,11;UBERON:0010313,6.12e-34,3;UBERON:0002342,6.12e-34,3;UBERON:0002005,6.12e-34,3;UBERON:0005428,6.12e-34,3;UBERON:0005062,6.12e-34,3;UBERON:0000013,2.80e-33,3;UBERON:0000011,3.36e-15,3;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73262329124385,7.02789739733949,4.09304455692318,4.06246956519338,2.67358408898873,0,3.64329631507405,4.09158201075837,5.92931666919785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:31305411..31305419,+ | |||
}} |
Latest revision as of 00:42, 5 August 2015
Short description: | p@chr2:31305411..31305419, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:31305411..31305419, + |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.97e-77 | 9 |
neuron | 3.59e-21 | 33 |
neuronal stem cell | 3.59e-21 | 33 |
neuroblast | 3.59e-21 | 33 |
electrically signaling cell | 3.59e-21 | 33 |
electrically responsive cell | 6.32e-18 | 39 |
electrically active cell | 6.32e-18 | 39 |
neural cell | 2.91e-16 | 43 |
ectodermal cell | 6.80e-16 | 44 |
neurectodermal cell | 6.80e-16 | 44 |
embryonic cell | 5.63e-10 | 70 |
somatic stem cell | 1.22e-07 | 91 |
multi fate stem cell | 1.22e-07 | 91 |
stem cell | 3.71e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 4.97e-77 | 9 |
peripheral nervous system | 4.29e-63 | 11 |
neural crest-derived structure | 6.12e-34 | 3 |
neural crest | 6.12e-34 | 3 |
enteric nervous system | 6.12e-34 | 3 |
vagal neural crest | 6.12e-34 | 3 |
neural fold | 6.12e-34 | 3 |
sympathetic nervous system | 2.80e-33 | 3 |
parasympathetic nervous system | 3.36e-15 | 3 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |