FFCP PHASE1:Mm9::chr2:38469229..38469240,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:38469229..38469240,-|id=chr2:38469229..38469240,-|ontology_enrichment_celltype=CL:0000473!2.40e-10!3;CL:0000627!2.40e-10!3;CL:0000682!2.40e-10!3;CL:0000239!1.57e-08!6;CL:0000677!1.57e-08!6;CL:0000212!1.57e-08!6;CL:0000584!1.57e-08!6;CL:0000075!2.65e-07!7|ontology_enrichment_celltype_v019_2=CL:0000682,2.30e-30,3;CL:0000239,3.13e-15,6;CL:0000677,3.13e-15,6;CL:0000584,3.13e-15,6;CL:0000066,3.78e-14,25;CL:0000473,1.91e-13,7;CL:0000075,3.73e-13,7;CL:0002563,2.23e-10,9;CL:0002251,2.23e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!5.08e-10!3;UBERON:0000344!3.68e-09!15;UBERON:0001962!2.94e-07!2;UBERON:0001961!2.94e-07!2;UBERON:0001744!2.94e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.74e-29,3;UBERON:0001962,3.13e-20,2;UBERON:0001961,3.13e-20,2;UBERON:0001744,3.13e-20,2;UBERON:0000344,2.59e-16,15;UBERON:0003199,7.19e-11,1;UBERON:0000029,8.99e-11,1;UBERON:0001097,8.99e-11,1;UBERON:0003968,8.99e-11,1;UBERON:0001467,8.99e-11,1;UBERON:0003350,2.23e-10,9;UBERON:0004808,2.23e-10,9;UBERON:0001277,2.23e-10,9;UBERON:0004923,2.89e-10,24;UBERON:0000485,1.33e-08,11;UBERON:0001242,2.28e-07,13;UBERON:0001262,2.28e-07,13;UBERON:0004786,2.28e-07,13|phase1_expression=0,0.697950815278722,7.27998783023258,0,0,1.84667199103079,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59973479776923,4.35877634027623,10.3361753540704,11.630573896295,5.38678081714723,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0,0,0,0.452167921657868,0,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr2:38469229..38469240,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:38469229..38469240,- | |||
|description=CAGE_peak_at_chr2:38469229..38469240,- | |||
|id=chr2:38469229..38469240,- | |||
|ontology_enrichment_celltype=CL:0000473!2.40e-10!3;CL:0000627!2.40e-10!3;CL:0000682!2.40e-10!3;CL:0000239!1.57e-08!6;CL:0000677!1.57e-08!6;CL:0000212!1.57e-08!6;CL:0000584!1.57e-08!6;CL:0000075!2.65e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.30e-30,3;CL:0000239,3.13e-15,6;CL:0000677,3.13e-15,6;CL:0000584,3.13e-15,6;CL:0000066,3.78e-14,25;CL:0000473,1.91e-13,7;CL:0000075,3.73e-13,7;CL:0002563,2.23e-10,9;CL:0002251,2.23e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!5.08e-10!3;UBERON:0000344!3.68e-09!15;UBERON:0001962!2.94e-07!2;UBERON:0001961!2.94e-07!2;UBERON:0001744!2.94e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.74e-29,3;UBERON:0001962,3.13e-20,2;UBERON:0001961,3.13e-20,2;UBERON:0001744,3.13e-20,2;UBERON:0000344,2.59e-16,15;UBERON:0003199,7.19e-11,1;UBERON:0000029,8.99e-11,1;UBERON:0001097,8.99e-11,1;UBERON:0003968,8.99e-11,1;UBERON:0001467,8.99e-11,1;UBERON:0003350,2.23e-10,9;UBERON:0004808,2.23e-10,9;UBERON:0001277,2.23e-10,9;UBERON:0004923,2.89e-10,24;UBERON:0000485,1.33e-08,11;UBERON:0001242,2.28e-07,13;UBERON:0001262,2.28e-07,13;UBERON:0004786,2.28e-07,13 | |||
|phase1_expression=0,0.697950815278722,7.27998783023258,0,0,1.84667199103079,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59973479776923,4.35877634027623,10.3361753540704,11.630573896295,5.38678081714723,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0,0,0,0.452167921657868,0,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr2:38469229..38469240,- | |||
}} |
Latest revision as of 03:56, 5 August 2015
Short description: | p@chr2:38469229..38469240, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:38469229..38469240, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.30e-30 | 3 |
brush border epithelial cell | 3.13e-15 | 6 |
gut absorptive cell | 3.13e-15 | 6 |
enterocyte | 3.13e-15 | 6 |
epithelial cell | 3.78e-14 | 25 |
defensive cell | 1.91e-13 | 7 |
columnar/cuboidal epithelial cell | 3.73e-13 | 7 |
intestinal epithelial cell | 2.23e-10 | 9 |
epithelial cell of alimentary canal | 2.23e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 2.74e-29 | 3 |
gut-associated lymphoid tissue | 3.13e-20 | 2 |
mucosa-associated lymphoid tissue | 3.13e-20 | 2 |
lymphoid tissue | 3.13e-20 | 2 |
mucosa | 2.59e-16 | 15 |
egg chamber | 7.19e-11 | 1 |
lymph node | 8.99e-11 | 1 |
axillary lymph node | 8.99e-11 | 1 |
peripheral lymph node | 8.99e-11 | 1 |
shoulder | 8.99e-11 | 1 |
epithelium of mucosa | 2.23e-10 | 9 |
gastrointestinal system epithelium | 2.23e-10 | 9 |
intestinal epithelium | 2.23e-10 | 9 |
organ component layer | 2.89e-10 | 24 |
simple columnar epithelium | 1.33e-08 | 11 |
intestinal mucosa | 2.28e-07 | 13 |
wall of intestine | 2.28e-07 | 13 |
gastrointestinal system mucosa | 2.28e-07 | 13 |