FFCP PHASE1:Hg19::chr7:80373118..80373135,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10512 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10725 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=384bp_to_D32000_5end | |||
|cluster_id=chr7:80373118..80373135,- | |||
|coexpression_cluster_id=C1439 | |||
|description=CAGE_peak_21_at_SEMA3C_5end | |||
|id=chr7:80373118..80373135,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.01e-59;3!CL:0000388;2.01e-59;3!CL:0000214;8.11e-28;3!CL:0000499;1.88e-25;28!CL:0000153;1.12e-20;9!CL:0000447;1.12e-20;9!CL:0000327;1.09e-12;15!CL:0002541;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.22e-59,3;CL:0000388,1.22e-59,3;CL:0000214,8.12e-28,3;CL:0000499,1.52e-25,28;CL:0000153,9.50e-21,9;CL:0000447,9.50e-21,9;CL:0000327,9.83e-13,15;CL:0002541,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!9.78e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:6193;4.66e-21;1!DOID:3350;3.18e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,9.43e-21,1;DOID:3350,4.52e-11,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.01e-59;3!UBERON:0000043;2.01e-59;3!UBERON:0007845;2.01e-59;3!UBERON:0006915;8.11e-28;3!UBERON:0007616;8.11e-28;3!UBERON:0002217;8.11e-28;3!UBERON:0002018;8.11e-28;3!UBERON:0004905;4.43e-11;8!UBERON:0000982;4.43e-11;8!UBERON:0004770;4.43e-11;8!UBERON:0004457;5.93e-10;9!UBERON:0000042;5.93e-10;9!UBERON:0003124;6.56e-08;3!UBERON:0000920;6.56e-08;3!UBERON:0000486;1.09e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.22e-59,3;UBERON:0000043,1.22e-59,3;UBERON:0007845,1.22e-59,3;UBERON:0006915,8.12e-28,3;UBERON:0007616,8.12e-28,3;UBERON:0002217,8.12e-28,3;UBERON:0002018,8.12e-28,3;UBERON:0004905,4.43e-11,8;UBERON:0000982,4.43e-11,8;UBERON:0004770,4.43e-11,8;UBERON:0000920,7.76e-08,3;UBERON:0004457,1.09e-07,12;UBERON:0000042,1.09e-07,12 | |||
|phase1_expression=0,0,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,1.44846518960824,0,0.486634870302636,0.283604451492204,0.221729397462564,0.351339142772504,0,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,1.43418310374407,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0,0.504867548488229,0.0920498986422993,0,0.355009592516614,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0.790204397959275,0,0,0,0,0,0.671928512795438,0,0.53735113621709,0.290633938513962,0.383382679165211,0,0,0,0,0,0.063497894292169,0.763976851116555,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.965123526861645,0,0,0.177561725313127,0,0,0,0,0.802025881213139,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0.330569830721956,0.384380134730212,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,4.64436797654861,4.28083360847872,0,0.349934720244983,0,0,0,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0.23874448473769,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.661983911750998,0,0,0,0.277349346026277,0.173559738335131,0.0979923974143777,0,0,1.0319161948297,0,0,0,0.0969890164884194,0.176512253383001,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0.305994652908965,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.754703705257725,0.889811221596536,0,0.302461847526478,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0,0.53168342911599,0.521745061811734,0.450772826991655,0.380805212168795,0.406870733204662,0.727394636810238,0.107410557042488,0.464033759878494,0,0.800055529326307,0.343395705182793,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0.179088841081487,0,0.438568099157414,0.176689145945881,0.38582807654183,0.337884881306145,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0.172214979660816,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0.705351887381368,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0.135939465953663,0,0,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,1.11598505450025,1.38652688589425,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p21@SEMA3C | |||
}} |
Latest revision as of 17:16, 19 September 2015
Short description: | p21@SEMA3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SEMA3C_5end |
Coexpression cluster: | C1439_Synoviocyte_Fibroblast_heart_mesenchymal_Chondrocyte_Hep2_Myoblast |
Association with transcript: | 384bp_to_D32000_5end |
EntrezGene: | SEMA3C |
HGNC: | 10725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.22e-59 | 3 |
tendon cell | 1.22e-59 | 3 |
synovial cell | 8.12e-28 | 3 |
stromal cell | 1.52e-25 | 28 |
GAG secreting cell | 9.50e-21 | 9 |
carbohydrate secreting cell | 9.50e-21 | 9 |
extracellular matrix secreting cell | 9.83e-13 | 15 |
chorionic membrane mesenchymal stem cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.22e-59 | 3 |
tendon | 1.22e-59 | 3 |
regular connective tissue | 1.22e-59 | 3 |
stratified squamous epithelium | 8.12e-28 | 3 |
layer of synovial tissue | 8.12e-28 | 3 |
synovial joint | 8.12e-28 | 3 |
synovial membrane of synovial joint | 8.12e-28 | 3 |
articulation | 4.43e-11 | 8 |
skeletal joint | 4.43e-11 | 8 |
articular system | 4.43e-11 | 8 |
egg chorion | 7.76e-08 | 3 |
cavity lining | 1.09e-07 | 12 |
serous membrane | 1.09e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 9.43e-21 | 1 |
mesenchymal cell neoplasm | 4.52e-11 | 2 |