FFCP PHASE1:Hg19::chr8:128806753..128806815,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5820 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=9709 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000504719,ENST00000517525,ENST00000521951,ENST00000523328,ENST00000524165,NR_003367,uc003ysj.2,uc010mdp.1,uc010mdq.2_5end | |||
|cluster_id=chr8:128806753..128806815,+ | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_1_at_PVT1_5end | |||
|id=chr8:128806753..128806815,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.08e-14!254;CL:0000003!1.55e-10!722;CL:0000548!3.18e-10!679;CL:0000004!3.18e-10!679;CL:0000255!3.18e-10!679;CL:0000012!4.02e-10!682;CL:0000076!2.82e-07!62;CL:0000063!4.06e-07!578 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.16e-14,253;CL:0000076,4.01e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.45e-45!235;DOID:14566!5.27e-45!239;DOID:0050687!3.66e-28!143;DOID:0050686!3.91e-21!137;DOID:305!1.92e-20!106;DOID:2531!2.12e-07!51;DOID:0060083!2.12e-07!51;DOID:1240!7.63e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.21e-45,235;DOID:14566,4.41e-45,239;DOID:0050687,3.24e-28,143;DOID:0050686,3.52e-21,137;DOID:305,1.79e-20,106;DOID:2531,2.04e-07,51;DOID:0060083,2.04e-07,51;DOID:1240,7.34e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@PVT1 | |||
}} |
Latest revision as of 06:55, 16 September 2015
Short description: | p1@PVT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PVT1_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 0bp_to_ENST00000504719, ENST00000517525, ENST00000521951, ENST00000523328, ENST00000524165, NR_003367, uc003ysj.2, uc010mdp.1, uc010mdq.2_5end |
EntrezGene: | PVT1 |
HGNC: | 9709 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.16e-14 | 253 |
squamous epithelial cell | 4.01e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.21e-45 | 235 |
disease of cellular proliferation | 4.41e-45 | 239 |
cell type cancer | 3.24e-28 | 143 |
organ system cancer | 3.52e-21 | 137 |
carcinoma | 1.79e-20 | 106 |
hematologic cancer | 2.04e-07 | 51 |
immune system cancer | 2.04e-07 | 51 |
leukemia | 7.34e-07 | 39 |